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22 Publications

2023 | Thesis | IST-REx-ID: 12716 | OA
L. Burnett, “To flee, or not to flee? Using innate defensive behaviours to investigate rapid perceptual decision-making through subcortical circuits in mouse models of autism,” Institute of Science and Technology Austria, 2023.
[Published Version] View | Files available | DOI
 
2023 | Thesis | IST-REx-ID: 12826 | OA
V. Pokusaeva, “Neural control of optic flow-based navigation in Drosophila melanogaster,” Institute of Science and Technology Austria, 2023.
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2023 | Journal Article | IST-REx-ID: 13230 | OA
J. A. Charlton, W. F. Mlynarski, Y. H. Bai, A. M. Hermundstad, and R. L. T. Goris, “Environmental dynamics shape perceptual decision bias,” PLoS Computational Biology, vol. 19, no. 6. Public Library of Science, 2023.
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2023 | Journal Article | IST-REx-ID: 12349 | OA
D. Gupta, W. F. Mlynarski, A. L. Sumser, O. Symonova, J. Svaton, and M. A. Jösch, “Panoramic visual statistics shape retina-wide organization of receptive fields,” Nature Neuroscience, vol. 26. Springer Nature, pp. 606–614, 2023.
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2023 | Research Data | IST-REx-ID: 12370 | OA
D. Gupta, A. L. Sumser, and M. A. Jösch, “Research Data for: Panoramic visual statistics shape retina-wide organization of receptive fields.” Institute of Science and Technology Austria, 2023.
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2023 | Thesis | IST-REx-ID: 12531 | OA
K. Kirillova, “Panoramic functional gradients across the mouse retina,” Institute of Science and Technology Austria, 2023.
[Published Version] View | Files available | DOI
 
2022 | Journal Article | IST-REx-ID: 12226 | OA
V. Pokusaeva, A. R. Diez, L. Espinar, A. T. Pérez, and G. J. Filion, “Strand asymmetry influences mismatch resolution during single-strand annealing,” Genome Biology, vol. 23. Springer Nature, 2022.
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2022 | Journal Article | IST-REx-ID: 12288 | OA
A. L. Sumser, M. A. Jösch, P. M. Jonas, and Y. Ben Simon, “Fast, high-throughput production of improved rabies viral vectors for specific, efficient and versatile transsynaptic retrograde labeling,” eLife, vol. 11. eLife Sciences Publications, 2022.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
2022 | Journal Article | IST-REx-ID: 9955
R. Reyes‐Pinto et al., “Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum,” Journal of Comparative Neurology, vol. 530, no. 2. Wiley, pp. 553–573, 2022.
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2021 | Journal Article | IST-REx-ID: 7551 | OA
F. A. Fredes Tolorza, M. A. Silva Sifuentes, P. Koppensteiner, K. Kobayashi, M. A. Jösch, and R. Shigemoto, “Ventro-dorsal hippocampal pathway gates novelty-induced contextual memory formation,” Current Biology, vol. 31, no. 1. Elsevier, p. P25–38.E5, 2021.
[Published Version] View | Files available | DOI | WoS
 
2020 | Journal Article | IST-REx-ID: 8643 | OA
A. Deichler et al., “A specialized reciprocal connectivity suggests a link between the mechanisms by which the superior colliculus and parabigeminal nucleus produce defensive behaviors in rodents,” Scientific Reports, vol. 10. Springer Nature, 2020.
[Published Version] View | Files available | DOI | WoS
 
2020 | Journal Article | IST-REx-ID: 7160
J. E. Salazar et al., “Anatomical specializations related to foraging in the visual system of a nocturnal insectivorous bird, the band-winged nightjar (Aves: Caprimulgiformes),” Brain, Behavior and Evolution, vol. 94, no. 1–4. Karger Publishers, pp. 27–36, 2020.
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2018 | Journal Article | IST-REx-ID: 410 | OA
J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M. A. Jösch, and D. Cox, “A micro-CT-based method for quantitative brain lesion characterization and electrode localization,” Scientific Reports, vol. 8, no. 1. Nature Publishing Group, 2018.
[Published Version] View | Files available | DOI | WoS
 
2018 | Journal Article | IST-REx-ID: 62 | OA
A. Shabazi et al., “Flexible learning-free segmentation and reconstruction of neural volumes,” Scientific Reports, vol. 8, no. 1. Nature Publishing Group, 2018.
[Published Version] View | Files available | DOI | WoS
 
2018 | Journal Article | IST-REx-ID: 6010 | OA
F. Garrido-Charad et al., ““Shepherd’s crook” neurons drive and synchronize the enhancing and suppressive mechanisms of the midbrain stimulus selection network,” Proceedings of the National Academy of Sciences, vol. 115, no. 32. National Academy of Sciences, pp. E7615–E7623, 2018.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | WoS | PubMed | Europe PMC
 
2018 | Journal Article | IST-REx-ID: 6
J. Masís, D. Mankus, S. Wolff, G. Guitchounts, M. A. Jösch, and D. Cox, “A micro-CT-based method for characterising lesions and locating electrodes in small animal brains,” Journal of visualized experiments, vol. 141. MyJove Corporation, 2018.
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2017 | Journal Article | IST-REx-ID: 740 | OA
R. Shigemoto and M. A. Jösch, “The genetic encoded toolbox for electron microscopy and connectomics,” WIREs Developmental Biology, vol. 6, no. 6. Wiley-Blackwell, 2017.
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2017 | Journal Article | IST-REx-ID: 944
R. J. Beattie et al., “Mosaic analysis with double markers reveals distinct sequential functions of Lgl1 in neural stem cells,” Neuron, vol. 94, no. 3. Cell Press, p. 517–533.e3, 2017.
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2015 | Journal Article | IST-REx-ID: 1793 | OA
O. Symonova, C. Topp, and H. Edelsbrunner, “DynamicRoots: A software platform for the reconstruction and analysis of growing plant roots,” PLoS One, vol. 10, no. 6. Public Library of Science, 2015.
[Published Version] View | Files available | DOI
 
2015 | Research Data Reference | IST-REx-ID: 9737
O. Symonova, C. Topp, and H. Edelsbrunner, “Root traits computed by DynamicRoots for the maize root shown in fig 2.” Public Library of Science, 2015.
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2013 | Journal Article | IST-REx-ID: 2822 | OA
C. Topp et al., “3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture,” PNAS, vol. 110, no. 18. National Academy of Sciences, pp. E1695–E1704, 2013.
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2012 | Conference Paper | IST-REx-ID: 2903 | OA
H. Edelsbrunner and O. Symonova, “The adaptive topology of a digital image,” presented at the ISVD: International Symposium on Voronoi Diagrams in Science and Engineering, New Brunswick, NJ, USA , 2012, pp. 41–48.
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