P. Payne, L. Geyrhofer, N. H. Barton, and J. P. Bollback, “CRISPR-based herd immunity can limit phage epidemics in bacterial populations,” eLife, vol. 7. eLife Sciences Publications, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/423
DOI: 10.7554/eLife.32035
WoS: 000431035800001

P. Payne, L. Geyrhofer, N. H. Barton, and J. P. Bollback, “Data from: CRISPR-based herd immunity limits phage epidemics in bacterial populations.” Dryad, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/9840
DOI: 10.5061/dryad.42n44

C. Igler, M. Lagator, G. Tkadik, J. P. Bollback, and C. C. Guet, “Evolutionary potential of transcription factors for gene regulatory rewiring,” Nature Ecology and Evolution, vol. 2, no. 10. Nature Publishing Group, pp. 1633–1643, 2018.
LibreCat: https://research-explorer.ista.ac.at/record/67
DOI: 10.1038/s41559-018-0651-y
WoS: 000447947600021

M. Lagator, S. Sarikas, H. Acar, J. P. Bollback, and C. C. Guet, “Regulatory network structure determines patterns of intermolecular epistasis,” eLife, vol. 6. eLife Sciences Publications, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/570
DOI: 10.7554/eLife.28921

P. Payne, “Bacterial herd and social immunity to phages,” Institute of Science and Technology Austria, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/6291

F. Jesse, “The lac operon in the wild,” Institute of Science and Technology Austria, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/820
DOI: 10.15479/AT:ISTA:th_857

R. A. Fernandes Redondo, H. de Vladar, T. Wodarski, and J. P. Bollback, “Evolutionary interplay between structure, energy and epistasis in the coat protein of the =54 phage family,” Journal of the Royal Society Interface, vol. 14, no. 126. Royal Society of London, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/1077
DOI: 10.1098/rsif.2016.0139
WoS: 000393380400001

M. Lagator, T. Paixao, N. H. Barton, J. P. Bollback, and C. C. Guet, “On the mechanistic nature of epistasis in a canonical cis-regulatory element,” eLife, vol. 6. eLife Sciences Publications, 2017.
LibreCat: https://research-explorer.ista.ac.at/record/954
DOI: 10.7554/eLife.25192
WoS: 000404024800001

M. Lagator, C. Igler, A. Moreno, C. C. Guet, and J. P. Bollback, “Epistatic interactions in the arabinose cis-regulatory element,” Molecular Biology and Evolution, vol. 33, no. 3. Oxford University Press, pp. 761–769, 2016.
LibreCat: https://research-explorer.ista.ac.at/record/1427
DOI: 10.1093/molbev/msv269

H. Acar, “Selective barriers to horizontal gene transfer,” Institute of Science and Technology Austria, 2016.
LibreCat: https://research-explorer.ista.ac.at/record/1121

R. A. Fernandes Redondo, H. de Vladar, T. Wodarski, and J. P. Bollback, “Data from evolutionary interplay between structure, energy and epistasis in the coat protein of the =54 phage family.” The Royal Society, 2016.
LibreCat: https://research-explorer.ista.ac.at/record/9864
DOI: 10.6084/m9.figshare.4315652.v1

M. Tugrul, “Experimental Data for Binding Site Evolution of Bacterial RNA Polymerase.” Institute of Science and Technology Austria, 2016.
LibreCat: https://research-explorer.ista.ac.at/record/5554
DOI: 10.15479/AT:ISTA:43

B. Hall, H. Acar, A. Nandipati, and M. Barlow, “Growth rates made easy,” Molecular Biology and Evolution, vol. 31, no. 1. Oxford University Press, pp. 232–238, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/1902
DOI: 10.1093/molbev/mst187
PMID: 24170494

A. Kupczok and J. P. Bollback, “Motif depletion in bacteriophages infecting hosts with CRISPR systems,” BMC Genomics, vol. 15, no. 1. BioMed Central, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/2042
DOI: 10.1186/1471-2164-15-663

A. Kupczok and J. P. Bollback, “Probabilistic models for CRISPR spacer content evolution ,” BMC Evolutionary Biology, vol. 13, no. 1. BioMed Central, pp. 54–54, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/2412
DOI: 10.1186/1471-2148-13-54

R. A. Fernandes Redondo, A. Kupczok, G. Stift, and J. P. Bollback, “Complete genome sequence of the novel phage MG- infecting bacillus weihenstephanensis,” Genome Announcements, vol. 1, no. 3. American Society for Microbiology, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/2410
DOI: 10.1128/genomeA.00216-13

M. Ward, S. Lycett, D. Avila, J. P. Bollback, and A. Leigh Brown, “Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza,” BMC Evolutionary Biology, vol. 13, no. 1. BioMed Central, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/500
DOI: 10.1186/1471-2148-13-222

M. Cozzuol et al., “A new species of tapir from the Amazon,” Journal of Mammalogy, vol. 94, no. 6. Oxford University Press, pp. 1331–1345, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/501
DOI: 10.1644/12-MAMM-A-169.1

E. Tarazona Santos et al., “Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NC, and NC: Functional implications,” Molecular Biology and Evolution, vol. 30, no. 9. Oxford University Press, pp. 2157–2167, 2013.
LibreCat: https://research-explorer.ista.ac.at/record/508
DOI: 10.1093/molbev/mst119
PMID: 23821607

I. Ebersberger et al., “A consistent phylogenetic backbone for the fungi,” Molecular Biology and Evolution, vol. 29, no. 5. Oxford University Press, pp. 1319–1334, 2012.
LibreCat: https://research-explorer.ista.ac.at/record/2411
DOI: 10.1093/molbev/msr285