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179 Publications

2016 | Journal Article | IST-REx-ID: 1151 | OA
Simonini, Sara, Joyita Deb, Laila Moubayidin, Pauline Stephenson, Manoj Valluru, Alejandra Freire Rios, Karim Sorefan, Dolf Weijers, Jirí Friml, and Lars Östergaard. “A Noncanonical Auxin Sensing Mechanism Is Required for Organ Morphogenesis in Arabidopsis.” Genes and Development 30, no. 20 (2016): 2286–96. https://doi.org/10.1101/gad.285361.116.
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2016 | Journal Article | IST-REx-ID: 1153 | OA
Žádníková, Petra, Krzysztof T Wabnik, Anas Abuzeineh, Marçal Gallemí, Dominique Van Der Straeten, Richard Smith, Dirk Inze, Jirí Friml, Przemysław Prusinkiewicz, and Eva Benková. “A Model of Differential Growth Guided Apical Hook Formation in Plants.” Plant Cell 28, no. 10 (2016): 2464–77. https://doi.org/10.1105/tpc.15.00569.
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2015 | Journal Article | IST-REx-ID: 532
Li, Wenyang, Mengdi Ma, Ying Feng, Hongjiang Li, Yichuan Wang, Yutong Ma, Mingzhe Li, Fengying An, and Hongwei Guo. “EIN2-Directed Translational Regulation of Ethylene Signaling in Arabidopsis.” Cell 163, no. 3 (2015): 670–83. https://doi.org/10.1016/j.cell.2015.09.037.
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2015 | Journal Article | IST-REx-ID: 1543
Olvera Carrillo, Yadira, Michiel Van Bel, Tom Van Hautegem, Matyas Fendrych, Marlies Huysmans, Mária Šimášková, Matthias Van Durme, et al. “A Conserved Core of Programmed Cell Death Indicator Genes Discriminates Developmentally and Environmentally Induced Programmed Cell Death in Plants.” Plant Physiology 169, no. 4 (2015): 2684–99. https://doi.org/10.1104/pp.15.00769.
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2015 | Journal Article | IST-REx-ID: 1554 | OA
Liao, Cheyang, Wouter Smet, Géraldine Brunoud, Saiko Yoshida, Teva Vernoux, and Dolf Weijers. “Reporters for Sensitive and Quantitative Measurement of Auxin Response.” Nature Methods 12, no. 3 (2015): 207–10. https://doi.org/10.1038/nmeth.3279.
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2015 | Journal Article | IST-REx-ID: 1556 | OA
Jia, Yuebin, Huiyu Tian, Hongjiang Li, Qianqian Yu, Lei Wang, Jiří Friml, and Zhaojun Ding. “The Arabidopsis Thaliana Elongator Complex Subunit 2 Epigenetically Affects Root Development.” Journal of Experimental Botany 66, no. 15 (2015): 4631–42. https://doi.org/10.1093/jxb/erv230.
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2015 | Journal Article | IST-REx-ID: 1558
Ivanchenko, Maria, Jinsheng Zhu, Bangjun Wang, Eva Medvecka, Yunlong Du, Elisa Azzarello, Stefano Mancuso, et al. “The Cyclophilin a DIAGEOTROPICA Gene Affects Auxin Transport in Both Root and Shoot to Control Lateral Root Formation.” Development 142, no. 4 (2015): 712–21. https://doi.org/10.1242/dev.113225.
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2015 | Journal Article | IST-REx-ID: 1562
Grones, Peter, Xu Chen, Sibu Simon, Walter Kaufmann, Riet De Rycke, Tomasz Nodzyński, Eva Zažímalová, and Jirí Friml. “Auxin-Binding Pocket of ABP1 Is Crucial for Its Gain-of-Function Cellular and Developmental Roles.” Journal of Experimental Botany 66, no. 16 (2015): 5055–65. https://doi.org/10.1093/jxb/erv177.
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2015 | Journal Article | IST-REx-ID: 1569 | OA
Doyle, Siamsa, Ash Haegera, Thomas Vain, Adeline Rigala, Corrado Viotti, Małgorzata Łangowskaa, Qian Maa, et al. “An Early Secretory Pathway Mediated by Gnom-like 1 and Gnom Is Essential for Basal Polarity Establishment in Arabidopsis Thaliana.” PNAS 112, no. 7 (2015): E806–15. https://doi.org/10.1073/pnas.1424856112.
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2015 | Journal Article | IST-REx-ID: 1574 | OA
Chen, Qian, Yang Liu, Steven Maere, Eunkyoung Lee, Gert Van Isterdael, Zidian Xie, Wei Xuan, et al. “A Coherent Transcriptional Feed-Forward Motif Model for Mediating Auxin-Sensitive PIN3 Expression during Lateral Root Development.” Nature Communications 6 (2015). https://doi.org/10.1038/ncomms9821.
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2015 | Journal Article | IST-REx-ID: 1591 | OA
Adamowski, Maciek, and Jirí Friml. “PIN-Dependent Auxin Transport: Action, Regulation, and Evolution.” Plant Cell 27, no. 1 (2015): 20–32. https://doi.org/10.1105/tpc.114.134874.
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2015 | Journal Article | IST-REx-ID: 1640 | OA
Šimášková, Mária, José O’Brien, Mamoona Khan-Djamei, Giel Van Noorden, Krisztina Ötvös, Anne Vieten, Inge De Clercq, et al. “Cytokinin Response Factors Regulate PIN-FORMED Auxin Transporters.” Nature Communications 6 (2015). https://doi.org/10.1038/ncomms9717.
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2015 | Journal Article | IST-REx-ID: 1819
Zwiewka, Marta, Tomasz Nodzyński, Stéphanie Robert, Steffen Vanneste, and Jiřĺ Friml. “Osmotic Stress Modulates the Balance between Exocytosis and Clathrin Mediated Endocytosis in Arabidopsis Thaliana.” Molecular Plant 8, no. 8 (2015): 1175–87. https://doi.org/10.1016/j.molp.2015.03.007.
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2015 | Journal Article | IST-REx-ID: 1847
Grones, Peter, and Jiřĺ Friml. “ABP1: Finally Docking.” Molecular Plant 8, no. 3 (2015): 356–58. https://doi.org/10.1016/j.molp.2014.12.013.
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2015 | Journal Article | IST-REx-ID: 1849
Himschoot, Ellie, Tom Beeckman, Jiřĺ Friml, and Steffen Vanneste. “Calcium Is an Organizer of Cell Polarity in Plants.” Biochimica et Biophysica Acta - Molecular Cell Research 1853, no. 9 (2015): 2168–72. https://doi.org/10.1016/j.bbamcr.2015.02.017.
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2015 | Journal Article | IST-REx-ID: 1865
Robert, Hélène, Wim Grunewald, Michael Sauer, Bernard Cannoot, Mercedes Soriano, Ranjan Swarup, Dolf Weijers, Malcolm Bennett, Kim Boutilier, and Jirí Friml. “Plant Embryogenesis Requires AUX/LAX-Mediated Auxin Influx.” Development 142, no. 4 (2015): 702–11. https://doi.org/10.1242/dev.115832.
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2015 | Journal Article | IST-REx-ID: 1871 | OA
Grones, Peter, and Jiří Friml. “Auxin Transporters and Binding Proteins at a Glance.” Journal of Cell Science 128, no. 1 (2015): 1–7. https://doi.org/10.1242/jcs.159418.
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2015 | Journal Article | IST-REx-ID: 1878
Cires Rodriguez, Eduardo, and José Prieto. “Phylogenetic Relationships of Petrocoptis A. Braun Ex Endl. (Caryophyllaceae), a Discussed Genus from the Iberian Peninsula.” Journal of Plant Research 128, no. 2 (2015): 223–38. https://doi.org/10.1007/s10265-014-0691-6.
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2015 | Journal Article | IST-REx-ID: 1879 | OA
Kremer, A, Stefaan Lippens, Sonia Bartunkova, Bob Asselbergh, Cendric Blanpain, Matyas Fendrych, A Goossens, et al. “Developing 3D SEM in a Broad Biological Context.” Journal of Microscopy 259, no. 2 (2015): 80–96. https://doi.org/10.1111/jmi.12211.
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2015 | Journal Article | IST-REx-ID: 1944
Rakusová, Hana, Matyas Fendrych, and Jirí Friml. “Intracellular Trafficking and PIN-Mediated Cell Polarity during Tropic Responses in Plants.” Current Opinion in Plant Biology 23, no. 2 (2015): 116–23. https://doi.org/10.1016/j.pbi.2014.12.002.
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2015 | Journal Article | IST-REx-ID: 1383 | OA
Yu, Luo, Stefan Scholl, Anett Doering, Zhang Yi, Niloufer Irani, Simone Di Rubbo, Lutz Neumetzler, et al. “V-ATPase Activity in the TGN/EE Is Required for Exocytosis and Recycling in Arabidopsis.” Nature Plants 1, no. 7 (2015): 15094. https://doi.org/10.1038/nplants.2015.94.
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2015 | Journal Article | IST-REx-ID: 1509 | OA
Michalko, Jaroslav, Marta Lukacisinova, Mark Tobias Bollenbach, and Jiří Friml. “Embryo-Lethal Phenotypes in Early Abp1 Mutants Are Due to Disruption of the Neighboring BSM Gene.” F1000 Research 4 (2015). https://doi.org/10.12688/f1000research.7143.1.
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2015 | Journal Article | IST-REx-ID: 1534 | OA
Wang, Hongzhe, Kezhen Yang, Junjie Zou, Lingling Zhu, Zidian Xie, Miyoterao Morita, Masao Tasaka, et al. “Transcriptional Regulation of PIN Genes by FOUR LIPS and MYB88 during Arabidopsis Root Gravitropism.” Nature Communications 6 (2015). https://doi.org/10.1038/ncomms9822.
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2015 | Journal Article | IST-REx-ID: 1536
Sasse, Joëlle, Sibu Simon, Christian Gübeli, Guowei Liu, Xi Cheng, Jirí Friml, Harro Bouwmeester, Enrico Martinoia, and Lorenzo Borghi. “Asymmetric Localizations of the ABC Transporter PaPDR1 Trace Paths of Directional Strigolactone Transport.” Current Biology 25, no. 5 (2015): 647–55. https://doi.org/10.1016/j.cub.2015.01.015.
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2014 | Journal Article | IST-REx-ID: 1994
Viaene, Tom, Katarina Landberg, Mattias Thelander, Eva Medvecka, Eric Pederson, Elena Feraru, Endymion Cooper, et al. “Directional Auxin Transport Mechanisms in Early Diverging Land Plants.” Current Biology 24, no. 23 (2014): 2786–91. https://doi.org/10.1016/j.cub.2014.09.056.
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2014 | Journal Article | IST-REx-ID: 1996 | OA
Hazak, Ora, Uri Obolski, Tomas Prat, Jiří Friml, Lilach Hadany, and Shaul Yalovsky. “Bimodal Regulation of ICR1 Levels Generates Self-Organizing Auxin Distribution.” PNAS 111, no. 50 (2014): E5471–79. https://doi.org/10.1073/pnas.1413918111.
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2014 | Journal Article | IST-REx-ID: 2061
Mazur, Ewa, Ewa Kurczyñska, and Jiří Friml. “Cellular Events during Interfascicular Cambium Ontogenesis in Inflorescence Stems of Arabidopsis.” Protoplasma 251, no. 5 (2014): 1125–39. https://doi.org/10.1007/s00709-014-0620-5.
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2014 | Journal Article | IST-REx-ID: 2188 | OA
Kania, Urszula, Matyas Fendrych, and Jiří Friml. “Polar Delivery in Plants; Commonalities and Differences to Animal Epithelial Cells.” Open Biology 4, no. APRIL (2014). https://doi.org/10.1098/rsob.140017.
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2014 | Journal Article | IST-REx-ID: 2222
Naramoto, Satoshi, Tomasz Nodzyński, Tomoko Dainobu, Hirotomo Takatsuka, Teruyo Okada, Jirí Friml, and Hiroo Fukuda. “VAN4 Encodes a Putative TRS120 That Is Required for Normal Cell Growth and Vein Development in Arabidopsis.” Plant and Cell Physiology 55, no. 4 (2014): 750–63. https://doi.org/10.1093/pcp/pcu012.
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2014 | Journal Article | IST-REx-ID: 2223 | OA
Tanaka, Hirokazu, Tomasz Nodzyński, Saeko Kitakura, Mugurel Feraru, Michiko Sasabe, Tomomi Ishikawa, Jürgen Kleine Vehn, Tatsuo Kakimoto, and Jiří Friml. “BEX1/ARF1A1C Is Required for BFA-Sensitive Recycling of PIN Auxin Transporters and Auxin-Mediated Development in Arabidopsis.” Plant and Cell Physiology 55, no. 4 (2014): 737–49. https://doi.org/10.1093/pcp/pct196.
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2014 | Journal Article | IST-REx-ID: 2240
Gadeyne, Astrid, Clara Sánchez Rodríguez, Steffen Vanneste, Simone Di Rubbo, Henrik Zauber, Kevin Vanneste, Jelle Van Leene, et al. “The TPLATE Adaptor Complex Drives Clathrin-Mediated Endocytosis in Plants.” Cell 156, no. 4 (2014): 691–704. https://doi.org/10.1016/j.cell.2014.01.039.
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2014 | Book Chapter | IST-REx-ID: 2245
Simon, Sibu, Petr Skůpa, Petre Dobrev, Jan Petrášek, Eva Zažímalová, and Jirí Friml. “Analyzing the in Vivo Status of Exogenously Applied Auxins: A HPLC-Based Method to Characterize the Intracellularly Localized Auxin Transporters.” In Plant Chemical Genomics, edited by Glenn Hicks and Stéphanie Robert, 1056:255–64. Methods in Molecular Biology. Springer, 2014. https://doi.org/10.1007/978-1-62703-592-7_23.
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2014 | Journal Article | IST-REx-ID: 2249 | OA
Chen, Yani, Kyaw Aung, Jakub Rolčík, Kathryn Walicki, Jirí Friml, and Federica Brandizzí. “Inter-Regulation of the Unfolded Protein Response and Auxin Signaling.” Plant Journal 77, no. 1 (2014): 97–107. https://doi.org/10.1111/tpj.12373.
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2014 | Journal Article | IST-REx-ID: 2253 | OA
Bailly, Aurélien, Bangjun Wang, Marta Zwiewka, Stephan Pollmann, Daniel Schenck, Hartwig Lüthen, Alexander Schulz, Jirí Friml, and Markus Geisler. “Expression of TWISTED DWARF1 Lacking Its In-Plane Membrane Anchor Leads to Increased Cell Elongation and Hypermorphic Growth.” Plant Journal 77, no. 1 (2014): 108–18. https://doi.org/10.1111/tpj.12369.
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2014 | Book Chapter | IST-REx-ID: 1806
Baster, Pawel, and Jiří Friml. “Auxin on the Road Navigated by Cellular PIN Polarity.” In Auxin and Its Role in Plant Development, edited by Eva Zažímalová, Jan Petrášek, and Eva Benková, 143–70. Springer, 2014. https://doi.org/10.1007/978-3-7091-1526-8_8.
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2014 | Journal Article | IST-REx-ID: 1852 | OA
Sassi, Massimiliano, Olivier Ali, Frédéric Boudon, Gladys Cloarec, Ursula Abad, Coralie Cellier, Xu Chen, et al. “An Auxin-Mediated Shift toward Growth Isotropy Promotes Organ Formation at the Shoot Meristem in Arabidopsis.” Current Biology 24, no. 19 (2014): 2335–42. https://doi.org/10.1016/j.cub.2014.08.036.
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2014 | Journal Article | IST-REx-ID: 1862 | OA
Chen, Xu, Laurie Grandont, Hongjiang Li, Robert Hauschild, Sébastien Paque, Anas Abuzeineh, Hana Rakusová, Eva Benková, Catherine Perrot Rechenmann, and Jirí Friml. “Inhibition of Cell Expansion by Rapid ABP1-Mediated Auxin Effect on Microtubules.” Nature 516, no. 729 (2014): 90–93. https://doi.org/10.1038/nature13889.
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2014 | Journal Article | IST-REx-ID: 1893 | OA
Nováková, Petra, Sibylle Hirsch, Elena Feraru, Ricardo Tejos, Ringo Van Wijk, Tom Viaene, Mareike Heilmann, et al. “SAC Phosphoinositide Phosphatases at the Tonoplast Mediate Vacuolar Function in Arabidopsis.” PNAS 111, no. 7 (2014): 2818–23. https://doi.org/10.1073/pnas.1324264111.
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2014 | Journal Article | IST-REx-ID: 1897 | OA
Naramoto, Satoshi, Marisa Otegui, Natsumaro Kutsuna, Riet De Rycke, Tomoko Dainobu, Michael Karampelias, Masaru Fujimoto, et al. “Insights into the Localization and Function of the Membrane Trafficking Regulator GNOM ARF-GEF at the Golgi Apparatus in Arabidopsis.” Plant Cell 26, no. 7 (2014): 3062–76. https://doi.org/10.1105/tpc.114.125880.
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2014 | Journal Article | IST-REx-ID: 1901
Tian, Huiyu, Krzysztof T Wabnik, Tiantian Niu, Hongjiang Li, Qianqian Yu, Stephan Pollmann, Steffen Vanneste, et al. “WOX5-IAA17 Feedback Circuit-Mediated Cellular Auxin Response Is Crucial for the Patterning of Root Stem Cell Niches in Arabidopsis.” Molecular Plant 7, no. 2 (2014): 277–89. https://doi.org/10.1093/mp/sst118.
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2014 | Journal Article | IST-REx-ID: 1914
Sauer, Michael, and Jirí Friml. “Plant Biology: Gatekeepers of the Road to Protein Perdition.” Current Biology 24, no. 1 (2014): R27–29. https://doi.org/10.1016/j.cub.2013.11.019.
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2014 | Journal Article | IST-REx-ID: 1915
Chen, Xu, and Jirí Friml. “Rho-GTPase-Regulated Vesicle Trafficking in Plant Cell Polarity.” Biochemical Society Transactions 42, no. 1 (2014): 212–18. https://doi.org/10.1042/BST20130269.
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2014 | Journal Article | IST-REx-ID: 1917 | OA
Xu, Tongda, Ning Dai, Jisheng Chen, Shingo Nagawa, Min Cao, Hongjiang Li, Zimin Zhou, et al. “Cell Surface ABP1-TMK Auxin Sensing Complex Activates ROP GTPase Signaling.” Science 343, no. 6174 (2014): 1025–28. https://doi.org/10.1126/science.1245125.
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2014 | Journal Article | IST-REx-ID: 1921 | OA
Tejos, Ricardo, Michael Sauer, Steffen Vanneste, MiriamPalacios Palacios-Gomez, Hongjiang Li, Mareike Heilmann, Ringo Van Wijk, et al. “Bipolar Plasma Membrane Distribution of Phosphoinositides and Their Requirement for Auxin-Mediated Cell Polarity and Patterning in Arabidopsis.” Plant Cell 26, no. 5 (2014): 2114–28. https://doi.org/10.1105/tpc.114.126185.
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2014 | Journal Article | IST-REx-ID: 1924
Le, Jie, Xuguang Liu, Kezhen Yang, Xiaolan Chen, Lingling Zhu, Hongzhe Wang, Ming Wang, et al. “Auxin Transport and Activity Regulate Stomatal Patterning and Development.” Nature Communications 5 (2014). https://doi.org/10.1038/ncomms4090.
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2014 | Journal Article | IST-REx-ID: 1934
Marhavy, Peter, Jérôme Duclercq, Benjamin Weller, Elena Feraru, Agnieszka Bielach, Remko Offringa, Jirí Friml, Claus Schwechheimer, Angus Murphy, and Eva Benková. “Cytokinin Controls Polarity of PIN1-Dependent Auxin Transport during Lateral Root Organogenesis.” Current Biology 24, no. 9 (2014): 1031–37. https://doi.org/10.1016/j.cub.2014.04.002.
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2014 | Thesis | IST-REx-ID: 1402
Marhavá, Petra. Molecular Mechanisms of Patterning and Subcellular Trafficking in Arabidopsis Thaliana. IST Austria, 2014.
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2014 | Journal Article | IST-REx-ID: 1532
Yang, Huaiyu, Jenny Von Der Fecht Bartenbach, Jirí Friml, Jan Lohmann, Benjamin Neuhäuser, and Uwe Ludewig. “Auxin-Modulated Root Growth Inhibition in Arabidopsis Thaliana Seedlings with Ammonium as the Sole Nitrogen Source.” Functional Plant Biology 42, no. 3 (2014): 239–51. https://doi.org/10.1071/FP14171.
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2013 | Journal Article | IST-REx-ID: 2290 | OA
Boutté, Yohann, Kristoffer Jonsson, Heather Mcfarlane, Errin Johnson, Delphine Gendre, Ranjan Swarup, Jirí Friml, Lacey Samuels, Stéphanie Robert, and Rishikesh Bhalerao. “ECHIDNA Mediated Post Golgi Trafficking of Auxin Carriers for Differential Cell Elongation.” PNAS 110, no. 40 (2013): 16259–64. https://doi.org/10.1073/pnas.1309057110.
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2013 | Journal Article | IST-REx-ID: 2443
Simon, Sibu, Martin Kubeš, Pawel Baster, Stéphanie Robert, Petre Dobrev, Jirí Friml, Jan Petrášek, and Eva Zažímalová. “Defining the Selectivity of Processes along the Auxin Response Chain: A Study Using Auxin Analogues.” New Phytologist 200, no. 4 (2013): 1034–48. https://doi.org/10.1111/nph.12437.
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