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167 Publications

2020 | Journal Article | IST-REx-ID: 7582   OA
Moturu, Taraka Ramji, Sansrity Sinha, Hymavathi Salava, Sravankumar Thula, Tomasz Nodzyński, Radka Svobodová Vařeková, Jiří Friml, and Sibu Simon. “Molecular Evolution and Diversification of Proteins Involved in MiRNA Maturation Pathway.” Plants 9, no. 3 (2020): 299. https://doi.org/10.3390/plants9030299.
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2020 | Journal Article | IST-REx-ID: 7695   OA
Wang, J, E Mylle, Alexander J Johnson, N Besbrugge, G De Jaeger, Jiří Friml, R Pleskot, and D van Damme. “High Temporal Resolution Reveals Simultaneous Plasma Membrane Recruitment of TPLATE Complex Subunits.” Plant Physiology, 2020. https://doi.org/10.1104/pp.20.00178.
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2020 | Journal Article | IST-REx-ID: 7619   OA
Zhang, Xixi, Maciek Adamowski, Petra Marhavá, Shutang Tan, Yuzhou Zhang, Lesia Rodriguez Solovey, Marta Zwiewka, et al. “Arabidopsis Flippases Cooperate with ARF GTPase Exchange Factors to Regulate the Trafficking and Polarity of PIN Auxin Transporters.” The Plant Cell 32, no. 5 (2020): 1644–64. https://doi.org/10.1105/tpc.19.00869.
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2020 | Journal Article | IST-REx-ID: 7204   OA
Li, Yang, Yaping Wang, Shutang Tan, Zhen Li, Zhi Yuan, Matous Glanc, David Domjan, et al. “Root Growth Adaptation Is Mediated by PYLs ABA Receptor-PP2A Protein Phosphatase Complex.” Advanced Science 7, no. 3 (2020): 1901455. https://doi.org/10.1002/advs.201901455.
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2020 | Journal Article | IST-REx-ID: 7646
Lee, E, B Vila Nova Santana, E Samuels, F Benitez-Fuente, E Corsi, MA Botella, J Perez-Sancho, et al. “Rare Earth Elements Induce Cytoskeleton-Dependent and PI4P-Associated Rearrangement of SYT1/SYT5 ER-PM Contact Site Complexes in Arabidopsis.” Journal of Experimental Botany, 2020, eraa138. https://doi.org/10.1093/jxb/eraa138.
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2020 | Journal Article | IST-REx-ID: 7540
Verstraeten, Inge, H. Buyle, S. Werbrouck, M.C. Van Labeke, and D. Geelen. “In Vitro Shoot Growth and Adventitious Rooting of Wikstroemia Gemmata Depends on Light Quality.” Israel Journal of Plant Sciences 67, no. 1–2 (2020): 16–26. https://doi.org/10.1163/22238980-20191110.
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2020 | Journal Article | IST-REx-ID: 7879   OA
Han, Huibin, Hana Rakusová, Inge Verstraeten, Yuzhou Zhang, and Jiří Friml. “SCF TIR1/AFB Auxin Signaling for Bending Termination during Shoot Gravitropism.” Plant Physiology 183, no. 5 (2020): 37–40. https://doi.org/10.1104/pp.20.00212.
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2020 | Journal Article | IST-REx-ID: 7949   OA
Smith, S, S Zhu, L Joos, I Roberts, N Nikonorova, LD Vu, E Stes, et al. “The CEP5 Peptide Promotes Abiotic Stress Tolerance, as Revealed by Quantitative Proteomics, and Attenuates the AUX/IAA Equilibrium in Arabidopsis.” Molecular & Celluluar Proteomics, n.d. https://doi.org/10.1074/mcp.ra119.001826.
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2020 | Journal Article | IST-REx-ID: 7142
Gallei, Michelle C, C Luschnig, and Jiří Friml. “Auxin Signalling in Growth: Schrödinger’s Cat out of the Bag.” Current Opinion in Plant Biology 53 (2020): 43–49. https://doi.org/10.1016/j.pbi.2019.10.003.
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2020 | Journal Article | IST-REx-ID: 6997   OA
Zhang, Yuzhou, and Jiří Friml. “Auxin Guides Roots to Avoid Obstacles during Gravitropic Growth.” New Phytologist 225, no. 3 (2020): 1049–52. https://doi.org/10.1111/nph.16203.
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2020 | Journal Article | IST-REx-ID: 7490   OA
Narasimhan, Madhumitha, Alexander J Johnson, Roshan Prizak, Walter Kaufmann, Shutang Tan, Barbara E Casillas Perez, and Jiří Friml. “Evolutionarily Unique Mechanistic Framework of Clathrin-Mediated Endocytosis in Plants.” ELife 9 (2020): e52067. https://doi.org/10.7554/eLife.52067.
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2020 | Journal Article | IST-REx-ID: 7793   OA
Kuhn, André, Sigurd Ramans Harborough, Heather M McLaughlin, Bhavani Natarajan, Inge Verstraeten, Jiří Friml, Stefan Kepinski, and Lars Østergaard. “Direct ETTIN-Auxin Interaction Controls Chromatin States in Gynoecium Development.” ELife 9 (2020): e51787. https://doi.org/10.7554/elife.51787.
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2020 | Journal Article | IST-REx-ID: 7697   OA
Zhang, Yuzhou, Corinna Hartinger, Xiaojuan Wang, and Jiří Friml. “Directional Auxin Fluxes in Plants by Intramolecular Domain‐domain Co‐evolution of PIN Auxin Transporters.” New Phytologist, 2020. https://doi.org/10.1111/nph.16629.
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2020 | Journal Article | IST-REx-ID: 7427
Tan, Shutang, Melinda F Abas, Inge Verstraeten, Matous Glanc, Gergely Molnar, Jakub Hajny, Pavel Lasák, et al. “Salicylic Acid Targets Protein Phosphatase 2A to Attenuate Growth in Plants.” Current Biology 30, no. 3 (n.d.): 381–395.e8. https://doi.org/10.1016/j.cub.2019.11.058.
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2020 | Journal Article | IST-REx-ID: 7465   OA
Mazur, Ewa, Michelle C Gallei, Maciek Adamowski, Huibin Han, Hélène S. Robert, and Jiří Friml. “Clathrin-Mediated Trafficking and PIN Trafficking Are Required for Auxin Canalization and Vascular Tissue Formation in Arabidopsis.” Plant Science 293, no. 4 (2020): 110414. https://doi.org/10.1016/j.plantsci.2020.110414.
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2020 | Journal Article | IST-REx-ID: 7643
Han, Huibin, Hana Rakusova, Inge Verstraeten, Yuzhou Zhang, and Jiří Friml. “SCFTIR1/AFB Auxin Signaling for Bending Termination during Shoot Gravitropism.” Plant Physiology, 2020. https://doi.org/10.1104/pp.20.00212.
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2020 | Journal Article | IST-REx-ID: 7686
Xue, Huidan, Yuzhou Zhang, and Guanghui Xiao. “Neo-Gibberellin Signaling: Guiding the next Generation of the Green Revolution.” Trends in Plant Science, 2020. https://doi.org/10.1016/j.tplants.2020.04.001.
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2020 | Journal Article | IST-REx-ID: 7600   OA
Tan, Shutang, Xixi Zhang, Wei Kong, Xiao-Li Yang, Gergely Molnar, Zuzana Vondráková, Roberta Filepová, Jan Petrášek, Jiří Friml, and Hong-Wei Xue. “The Lipid Code-Dependent Phosphoswitch PDK1–D6PK Activates PIN-Mediated Auxin Efflux in Arabidopsis.” Nature Plants 6 (2020): 556–69. https://doi.org/10.1038/s41477-020-0648-9.
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2020 | Journal Article | IST-REx-ID: 8002   OA
Hörmayer, Lukas, Juan C Montesinos López, Petra Marhavá, Eva Benková, Saiko Yoshida, and Jiří Friml. “Wounding-Induced Changes in Cellular Pressure and Localized Auxin Signalling Spatially Coordinate Restorative Divisions in Roots.” Proceedings of the National Academy of Sciences, 2020, 202003346. https://doi.org/10.1073/pnas.2003346117.
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2020 | Journal Article | IST-REx-ID: 7219
Xiao, Guanghui, and Yuzhou Zhang. “Adaptive Growth: Shaping Auxin-Mediated Root System Architecture.” Trends in Plant Science 25, no. 2 (2020): 121–23. https://doi.org/10.1016/j.tplants.2019.12.001.
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2020 | Journal Article | IST-REx-ID: 7497
Han, L, X Zhou, Y Zhao, S Zhu, L Wu, Y He, X Ping, et al. “Colonization of Endophyte Acremonium Sp. D212 in Panax Notoginseng and Rice Mediated by Auxin and Jasmonic Acid.” Journal of Integrative Plant Biology, 2020. https://doi.org/10.1111/jipb.12905.
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2020 | Journal Article | IST-REx-ID: 7500   OA
Mazur, E, Ivan Kulik, Jakub Hajny, and Jiří Friml. “Auxin Canalization and Vascular Tissue Formation by TIR1/AFB-Mediated Auxin Signaling in Arabidopsis.” New Phytologist, 2020. https://doi.org/10.1111/nph.16446.
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2020 | Preprint | IST-REx-ID: 7601   OA
Wei, Zhuang, Shutang Tan, Tao Liu, Yuan Wu, Ji-Gang Lei, ZhengJun Chen, Jiří Friml, Hong-Wei Xue, and Kan Liao. “Plasmodesmata-like Intercellular Connections by Plant Remorin in Animal Cells.” BioRxiv. Cold Spring Harbor Laboratory, 2020.
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2019 | Journal Article | IST-REx-ID: 6104
Zwiewka, Marta, Agnieszka Bielach, Prashanth Tamizhselvan, Sharmila Madhavan, Eman Elrefaay Ryad, Shutang Tan, Mónika Hrtyan, et al. “Root Adaptation to H2O2-Induced Oxidative Stress by ARF-GEF BEN1- and Cytoskeleton-Mediated PIN2 Trafficking.” Plant and Cell Physiology 60, no. 2 (2019): 255–73. https://doi.org/10.1093/pcp/pcz001.
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2019 | Journal Article | IST-REx-ID: 6351   OA
Marhavá, Petra, Lukas Hörmayer, Saiko Yoshida, Peter Marhavy, Eva Benková, and Jiří Friml. “Re-Activation of Stem Cell Pathways for Pattern Restoration in Plant Wound Healing.” Cell 177, no. 4 (2019): 957–969.e13. https://doi.org/10.1016/j.cell.2019.04.015.
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2019 | Journal Article | IST-REx-ID: 6262   OA
Rakusová, Hana, Huibin Han, Petr Valošek, and Jiří Friml. “Genetic Screen for Factors Mediating PIN Polarization in Gravistimulated Arabidopsis Thaliana Hypocotyls.” The Plant Journal 98, no. 6 (2019): 1048–59. https://doi.org/10.1111/tpj.14301.
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2019 | Journal Article | IST-REx-ID: 6611   OA
Glanc, Matous, Matyas Fendrych, and Jiří Friml. “PIN2 Polarity Establishment in Arabidopsis in the Absence of an Intact Cytoskeleton.” Biomolecules 9, no. 6 (2019). https://doi.org/10.3390/biom9060222.
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2019 | Journal Article | IST-REx-ID: 7417
Sinclair, Scott A, S. Gille, M. Pauly, and U. Krämer. “Regulation of Acetylation of Plant Cell Wall Components Is Complex and Responds to External Stimuli.” Plant Signaling & Behavior, 2019, 1687185. https://doi.org/10.1080/15592324.2019.1687185.
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2019 | Journal Article | IST-REx-ID: 6023   OA
Yoshida, Saiko, Alja Van Der Schuren, Maritza Van Dop, Luc Van Galen, Shunsuke Saiga, Milad Adibi, Barbara Möller, et al. “A SOSEKI-Based Coordinate System Interprets Global Polarity Cues in Arabidopsis.” Nature Plants 5, no. 2 (2019): 160–66. https://doi.org/10.1038/s41477-019-0363-6.
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2019 | Journal Article | IST-REx-ID: 6504
Zhang, Yuzhou, P He, X Ma, Z Yang, C Pang, J Yu, G Wang, Jiří Friml, and G Xiao. “Auxin-Mediated Statolith Production for Root Gravitropism.” New Phytologist 224, no. 2 (2019): 761–74. https://doi.org/10.1111/nph.15932.
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2019 | Thesis | IST-REx-ID: 7172   OA
Vasileva, Mina K. Molecular Mechanisms of Endomembrane Trafficking in Arabidopsis Thaliana. IST Austria, 2019. https://doi.org/10.15479/AT:ISTA:7172.
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2019 | Journal Article | IST-REx-ID: 6377
Dejonghe, Wim, Isha Sharma, Bram Denoo, Steven De Munck, Qing Lu, Kiril Mishev, Haydar Bulut, et al. “Disruption of Endocytosis through Chemical Inhibition of Clathrin Heavy Chain Function.” Nature Chemical Biology 15, no. 6 (2019): 641–649. https://doi.org/10.1038/s41589-019-0262-1.
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2019 | Thesis | IST-REx-ID: 6269   OA
Narasimhan, Madhumitha. Clathrin-Mediated Endocytosis, Post-Endocytic Trafficking and Their Regulatory Controls in Plants . IST Austria, 2019. https://doi.org/10.15479/at:ista:th1075.
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2019 | Journal Article | IST-REx-ID: 6260   OA
Oochi, A, Jakub Hajny, K Fukui, Y Nakao, Michelle C Gallei, M Quareshy, K Takahashi, et al. “Pinstatic Acid Promotes Auxin Transport by Inhibiting PIN Internalization.” Plant Physiology 180, no. 2 (2019): 1152–65. https://doi.org/10.1104/pp.19.00201.
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2019 | Journal Article | IST-REx-ID: 6943   OA
Hörmayer, Lukas, and Jiří Friml. “Targeted Cell Ablation-Based Insights into Wound Healing and Restorative Patterning.” Current Opinion in Plant Biology 52 (2019): 124–30. https://doi.org/10.1016/j.pbi.2019.08.006.
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2019 | Journal Article | IST-REx-ID: 7143
Sinclair, Scott A, and Jiří Friml. “Defying Gravity: A Plant’s Quest for Moisture.” Cell Research 29 (2019): 965–66. https://doi.org/10.1038/s41422-019-0254-4.
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2019 | Journal Article | IST-REx-ID: 6366   OA
Bellstaedt, Julia, Jana Trenner, Rebecca Lippmann, Yvonne Poeschl, Xixi Zhang, Jiří Friml, Marcel Quint, and Carolin Delker. “A Mobile Auxin Signal Connects Temperature Sensing in Cotyledons with Growth Responses in Hypocotyls.” Plant Physiology 180, no. 2 (2019): 757–66. https://doi.org/10.1104/pp.18.01377.
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2019 | Journal Article | IST-REx-ID: 5908
Lee, Eunkyoung, Steffen Vanneste, Jessica Pérez-Sancho, Francisco Benitez-Fuente, Matthew Strelau, Alberto P. Macho, Miguel A. Botella, Jiří Friml, and Abel Rosado. “Ionic Stress Enhances ER–PM Connectivity via Phosphoinositide-Associated SYT1 Contact Site Expansion in Arabidopsis.” Proceedings of the National Academy of Sciences of the United States of America 116, no. 4 (2019): 1420–29. https://doi.org/10.1073/pnas.1818099116.
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2019 | Journal Article | IST-REx-ID: 6259
Cao, Min, Rong Chen, Pan Li, Yongqiang Yu, Rui Zheng, Danfeng Ge, Wei Zheng, et al. “TMK1-Mediated Auxin Signalling Regulates Differential Growth of the Apical Hook.” Nature 568 (2019): 240–43. https://doi.org/10.1038/s41586-019-1069-7.
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2019 | Journal Article | IST-REx-ID: 6261   OA
Wang, Y, Z Gong, Jiří Friml, and J Zhang. “Nitrate Modulates the Differentiation of Root Distal Stem Cells.” Plant Physiology 180, no. 1 (2019): 22–25. https://doi.org/10.1104/pp.18.01305.
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2019 | Journal Article | IST-REx-ID: 7106
Skokan, Roman, Eva Medvecká, Tom Viaene, Stanislav Vosolsobě, Marta Zwiewka, Karel Müller, Petr Skůpa, et al. “PIN-Driven Auxin Transport Emerged Early in Streptophyte Evolution.” Nature Plants 5, no. 11 (2019): 1114–19. https://doi.org/10.1038/s41477-019-0542-5.
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2019 | Journal Article | IST-REx-ID: 7182   OA
Alcântara, André, Jason Bosch, Fahimeh Nazari, Gesa Hoffmann, Michelle C Gallei, Simon Uhse, Martin A. Darino, et al. “Systematic Y2H Screening Reveals Extensive Effector-Complex Formation.” Frontiers in Plant Science 10, no. 11 (2019). https://doi.org/10.3389/fpls.2019.01437.
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2019 | Journal Article | IST-REx-ID: 7416
Sinclair, Scott A, and U. Krämer. “Generation of Effective Zinc-Deficient Agar-Solidified Media Allows Identification of Root Morphology Changes in Response to Zinc Limitation.” Plant Signaling & Behavior, 2019, 1687175. https://doi.org/10.1080/15592324.2019.1687175.
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2019 | Journal Article | IST-REx-ID: 6627   OA
Adamowski, Maciek, Lanxin Li, and Jiří Friml. “Reorientation of Cortical Microtubule Arrays in the Hypocotyl of Arabidopsis Thaliana Is Induced by the Cell Growth Process and Independent of Auxin Signaling.” International Journal of Molecular Sciences 20, no. 13 (2019): 3337. https://doi.org/10.3390/ijms20133337.
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2019 | Journal Article | IST-REx-ID: 6999   OA
Huang, D, Y Sun, Z Ma, M Ke, Y Cui, Z Chen, C Chen, et al. “Salicylic Acid-Mediated Plasmodesmal Closure via Remorin-Dependent Lipid Organization.” Proceedings of the National Academy of Sciences of the United States of America 116, no. 42 (2019): 21274–84. https://doi.org/10.1073/pnas.1911892116.
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2019 | Journal Article | IST-REx-ID: 6778   OA
Zhang, Yuzhou, G Xiao, X Wang, Xixi Zhang, and Jiří Friml. “Evolution of Fast Root Gravitropism in Seed Plants.” Nature Communications 10 (2019): 3480. https://doi.org/10.1038/s41467-019-11471-8.
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2018 | Journal Article | IST-REx-ID: 148   OA
Nishiyama, Tomoaki, Hidetoshi Sakayama, Jan De Vries, Henrik Buschmann, Denis Saint Marcoux, Kristian Ullrich, Fabian Haas, et al. “The Chara Genome: Secondary Complexity and Implications for Plant Terrestrialization.” Cell 174, no. 2 (2018): 448–464.e24. https://doi.org/10.1016/j.cell.2018.06.033.
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2018 | Book Chapter | IST-REx-ID: 408
Trinh, Hoang, Inge Verstraeten, and Danny Geelen. “In Vitro Assay for Induction of Adventitious Rooting on Intact Arabidopsis Hypocotyls.” In Root Development , 1761:95–102. Springer, 2018. https://doi.org/10.1007/978-1-4939-7747-5_7.
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2018 | Book Chapter | IST-REx-ID: 411
Karampelias, Michael, Ricardo Tejos, Jirí Friml, and Steffen Vanneste. “Optimized Whole Mount in Situ Immunolocalization for Arabidopsis Thaliana  Root Meristems and Lateral Root Primordia.” In Root Development. Methods and Protocols, edited by Daniela Ristova and Elke Barbez, 1761:131–43. MIMB. Springer, 2018. https://doi.org/10.1007/978-1-4939-7747-5_10.
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2018 | Journal Article | IST-REx-ID: 428   OA
Salanenka, Yuliya, Inge Verstraeten, Christian Löfke, Kaori Tabata, Satoshi Naramoto, Matous Glanc, and Jirí Friml. “Gibberellin DELLA Signaling Targets the Retromer Complex to Redirect Protein Trafficking to the Plasma Membrane.” PNAS 115, no. 14 (2018): 3716–21. https://doi.org/10.1073/pnas.1721760115.
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