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164 Publications

2020 | Journal Article | IST-REx-ID: 7582   OA
Molecular evolution and diversification of proteins involved in miRNA maturation pathway
T.R. Moturu, S. Sinha, H. Salava, S. Thula, T. Nodzyński, R.S. Vařeková, J. Friml, S. Simon, Plants 9 (2020) 299.
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2020 | Journal Article | IST-REx-ID: 7619
Arabidopsis flippases cooperate with ARF GTPase xxchange factors to regulate the trafficking and polarity of PIN auxin transporters
X. Zhang, M. Adamowski, P. Marhavá, S. Tan, Y. Zhang, L. Rodriguez Solovey, M. Zwiewka, V. Pukyšová, A.S. Sánchez, V.K. Raxwal, C.S. Hardtke, T. Nodzynski, J. Friml, The Plant Cell (2020) tpc.00869.2019.
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2020 | Journal Article | IST-REx-ID: 7695   OA
High temporal resolution reveals simultaneous plasma membrane recruitment of TPLATE complex subunits
J. Wang, E. Mylle, A.J. Johnson, N. Besbrugge, G. De Jaeger, J. Friml, R. Pleskot, D. van Damme, Plant Physiology (2020).
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2020 | Journal Article | IST-REx-ID: 7204   OA
Root growth adaptation is mediated by PYLs ABA receptor-PP2A protein phosphatase complex
Y. Li, Y. Wang, S. Tan, Z. Li, Z. Yuan, M. Glanc, D. Domjan, K. Wang, W. Xuan, Y. Guo, Z. Gong, J. Friml, J. Zhang, Advanced Science 7 (2020) 1901455.
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2020 | Journal Article | IST-REx-ID: 7646
Rare earth elements induce cytoskeleton-dependent and PI4P-associated rearrangement of SYT1/SYT5 ER-PM contact site complexes in Arabidopsis
E. Lee, B. Vila Nova Santana, E. Samuels, F. Benitez-Fuente, E. Corsi, M. Botella, J. Perez-Sancho, S. Vanneste, J. Friml, A. Macho, A. Alves Azevedo, A. Rosado, Journal of Experimental Botany (2020) eraa138.
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2020 | Journal Article | IST-REx-ID: 7540
In vitro shoot growth and adventitious rooting of Wikstroemia gemmata depends on light quality
I. Verstraeten, H. Buyle, S. Werbrouck, M.C. Van Labeke, D. Geelen, Israel Journal of Plant Sciences 67 (2020) 16–26.
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2020 | Journal Article | IST-REx-ID: 7142
Auxin signalling in growth: Schrödinger's cat out of the bag
M.C. Gallei, C. Luschnig, J. Friml, Current Opinion in Plant Biology 53 (2020) 43–49.
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2020 | Journal Article | IST-REx-ID: 6997   OA
Auxin guides roots to avoid obstacles during gravitropic growth
Y. Zhang, J. Friml, New Phytologist 225 (2020) 1049–1052.
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2020 | Journal Article | IST-REx-ID: 7490   OA
Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants
M. Narasimhan, A.J. Johnson, R. Prizak, W. Kaufmann, S. Tan, B.E. Casillas Perez, J. Friml, ELife 9 (2020) e52067.
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2020 | Journal Article | IST-REx-ID: 7697   OA View | DOI | Download (ext.)
 
2020 | Journal Article | IST-REx-ID: 7793   OA
Direct ETTIN-auxin interaction controls chromatin states in gynoecium development
A. Kuhn, S. Ramans Harborough, H.M. McLaughlin, B. Natarajan, I. Verstraeten, J. Friml, S. Kepinski, L. Østergaard, ELife 9 (2020) e51787.
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2020 | Journal Article | IST-REx-ID: 7427
Salicylic acid targets protein phosphatase 2A to attenuate growth in plants
S. Tan, M.F. Abas, I. Verstraeten, M. Glanc, G. Molnar, J. Hajny, P. Lasák, I. Petřík, E. Russinova, J. Petrášek, O. Novák, J. Pospíšil, J. Friml, Current Biology 30 (n.d.) 381–395.e8.
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2020 | Journal Article | IST-REx-ID: 7465   OA
Clathrin-mediated trafficking and PIN trafficking are required for auxin canalization and vascular tissue formation in Arabidopsis
E. Mazur, M.C. Gallei, M. Adamowski, H. Han, H.S. Robert, J. Friml, Plant Science 293 (2020) 110414.
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2020 | Journal Article | IST-REx-ID: 7643
SCFTIR1/AFB auxin signaling for bending termination during shoot gravitropism
H. Han, H. Rakusova, I. Verstraeten, Y. Zhang, J. Friml, Plant Physiology (2020).
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2020 | Journal Article | IST-REx-ID: 7686
Neo-gibberellin signaling: Guiding the next generation of the green revolution
H. Xue, Y. Zhang, G. Xiao, Trends in Plant Science (2020).
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2020 | Journal Article | IST-REx-ID: 7219
Adaptive growth: Shaping auxin-mediated root system architecture
G. Xiao, Y. Zhang, Trends in Plant Science 25 (2020) 121–123.
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2020 | Journal Article | IST-REx-ID: 7497
Colonization of endophyte Acremonium sp. D212 in Panax notoginseng and rice mediated by auxin and jasmonic acid
L. Han, X. Zhou, Y. Zhao, S. Zhu, L. Wu, Y. He, X. Ping, X. Lu, W. Huang, J. Qian, L. Zhang, X. Jiang, D. Zhu, C. Luo, S. Li, Q. Dong, Q. Fu, K. Deng, X. Wang, L. Wang, S. Peng, J. Wu, W. Li, J. Friml, Y. Zhu, X. He, Y. Du, Journal of Integrative Plant Biology (2020).
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2020 | Journal Article | IST-REx-ID: 7500   OA View | DOI | Download (ext.) | PubMed | Europe PMC
 
2020 | Preprint | IST-REx-ID: 7601   OA
Plasmodesmata-like intercellular connections by plant remorin in animal cells
Z. Wei, S. Tan, T. Liu, Y. Wu, J.-G. Lei, Z. Chen, J. Friml, H.-W. Xue, K. Liao, BioRxiv (2020).
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2019 | Journal Article | IST-REx-ID: 6104
Root adaptation to H2O2-induced oxidative stress by ARF-GEF BEN1- and cytoskeleton-mediated PIN2 trafficking
M. Zwiewka, A. Bielach, P. Tamizhselvan, S. Madhavan, E.E. Ryad, S. Tan, M. Hrtyan, P. Dobrev, R. Vanková, J. Friml, V.B. Tognetti, Plant and Cell Physiology 60 (2019) 255–273.
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2019 | Journal Article | IST-REx-ID: 6351   OA
Re-activation of stem cell pathways for pattern restoration in plant wound healing
P. Marhavá, L. Hörmayer, S. Yoshida, P. Marhavy, E. Benková, J. Friml, Cell 177 (2019) 957–969.e13.
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2019 | Journal Article | IST-REx-ID: 6262   OA
Genetic screen for factors mediating PIN polarization in gravistimulated Arabidopsis thaliana hypocotyls
H. Rakusová, H. Han, P. Valošek, J. Friml, The Plant Journal 98 (2019) 1048–1059.
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2019 | Journal Article | IST-REx-ID: 6611   OA
PIN2 polarity establishment in arabidopsis in the absence of an intact cytoskeleton
M. Glanc, M. Fendrych, J. Friml, Biomolecules 9 (2019).
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2019 | Journal Article | IST-REx-ID: 7417
Regulation of acetylation of plant cell wall components is complex and responds to external stimuli
S.A. Sinclair, S. Gille, M. Pauly, U. Krämer, Plant Signaling & Behavior (2019) 1687185.
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2019 | Journal Article | IST-REx-ID: 6023   OA
A SOSEKI-based coordinate system interprets global polarity cues in arabidopsis
S. Yoshida, A. Van Der Schuren, M. Van Dop, L. Van Galen, S. Saiga, M. Adibi, B. Möller, C.A. Ten Hove, P. Marhavy, R. Smith, J. Friml, D. Weijers, Nature Plants 5 (2019) 160–166.
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2019 | Journal Article | IST-REx-ID: 6504
Auxin-mediated statolith production for root gravitropism
Y. Zhang, P. He, X. Ma, Z. Yang, C. Pang, J. Yu, G. Wang, J. Friml, G. Xiao, New Phytologist 224 (2019) 761–774.
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2019 | Thesis | IST-REx-ID: 7172   OA
Molecular mechanisms of endomembrane trafficking in Arabidopsis thaliana
M.K. Vasileva, Molecular Mechanisms of Endomembrane Trafficking in Arabidopsis Thaliana, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6377
Disruption of endocytosis through chemical inhibition of clathrin heavy chain function
W. Dejonghe, I. Sharma, B. Denoo, S. De Munck, Q. Lu, K. Mishev, H. Bulut, E. Mylle, R. De Rycke, M.K. Vasileva, D.V. Savatin, W. Nerinckx, A. Staes, A. Drozdzecki, D. Audenaert, K. Yperman, A. Madder, J. Friml, D. Van Damme, K. Gevaert, V. Haucke, S.N. Savvides, J. Winne, E. Russinova, Nature Chemical Biology 15 (2019) 641–649.
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2019 | Thesis | IST-REx-ID: 6269   OA
Clathrin-Mediated endocytosis, post-endocytic trafficking and their regulatory controls in plants
M. Narasimhan, Clathrin-Mediated Endocytosis, Post-Endocytic Trafficking and Their Regulatory Controls in Plants , IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6260   OA
Pinstatic acid promotes auxin transport by inhibiting PIN internalization
A. Oochi, J. Hajny, K. Fukui, Y. Nakao, M.C. Gallei, M. Quareshy, K. Takahashi, T. Kinoshita, S. Harborough, S. Kepinski, H. Kasahara, R. Napier, J. Friml, K. Hayashi, Plant Physiology 180 (2019) 1152–1165.
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2019 | Journal Article | IST-REx-ID: 6943   OA
Targeted cell ablation-based insights into wound healing and restorative patterning
L. Hörmayer, J. Friml, Current Opinion in Plant Biology 52 (2019) 124–130.
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2019 | Journal Article | IST-REx-ID: 7143
Defying gravity: a plant's quest for moisture
S.A. Sinclair, J. Friml, Cell Research 29 (2019) 965–966.
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2019 | Journal Article | IST-REx-ID: 6366   OA
A mobile auxin signal connects temperature sensing in cotyledons with growth responses in hypocotyls
J. Bellstaedt, J. Trenner, R. Lippmann, Y. Poeschl, X. Zhang, J. Friml, M. Quint, C. Delker, Plant Physiology 180 (2019) 757–766.
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2019 | Preprint | IST-REx-ID: 7600   OA
A lipid code-dependent phosphoswitch directs PIN-mediated auxin efflux in Arabidopsis development
S. Tan, X. Zhang, W. Kong, X.-L. Yang, G. Molnar, J. Friml, H.-W. Xue, BioRxiv (2019).
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2019 | Journal Article | IST-REx-ID: 5908
Ionic stress enhances ER–PM connectivity via phosphoinositide-associated SYT1 contact site expansion in Arabidopsis
E. Lee, S. Vanneste, J. Pérez-Sancho, F. Benitez-Fuente, M. Strelau, A.P. Macho, M.A. Botella, J. Friml, A. Rosado, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 1420–1429.
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2019 | Journal Article | IST-REx-ID: 6259
TMK1-mediated auxin signalling regulates differential growth of the apical hook
M. Cao, R. Chen, P. Li, Y. Yu, R. Zheng, D. Ge, W. Zheng, X. Wang, Y. Gu, Z. Gelová, J. Friml, H. Zhang, R. Liu, J. He, T. Xu, Nature 568 (2019) 240–243.
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2019 | Journal Article | IST-REx-ID: 6261   OA
Nitrate modulates the differentiation of root distal stem cells
Y. Wang, Z. Gong, J. Friml, J. Zhang, Plant Physiology 180 (2019) 22–25.
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2019 | Journal Article | IST-REx-ID: 6999   OA
Salicylic acid-mediated plasmodesmal closure via Remorin-dependent lipid organization
D. Huang, Y. Sun, Z. Ma, M. Ke, Y. Cui, Z. Chen, C. Chen, C. Ji, T. Tran, L. Yang, S. Lam, Y. Han, G. Shu, J. Friml, Y. Miao, L. Jiang, X. Chen, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 21274–21284.
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2019 | Journal Article | IST-REx-ID: 7106
PIN-driven auxin transport emerged early in streptophyte evolution
R. Skokan, E. Medvecká, T. Viaene, S. Vosolsobě, M. Zwiewka, K. Müller, P. Skůpa, M. Karady, Y. Zhang, D.P. Janacek, U.Z. Hammes, K. Ljung, T. Nodzyński, J. Petrášek, J. Friml, Nature Plants 5 (2019) 1114–1119.
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2019 | Journal Article | IST-REx-ID: 7182   OA
Systematic Y2H screening reveals extensive effector-complex formation
A. Alcântara, J. Bosch, F. Nazari, G. Hoffmann, M.C. Gallei, S. Uhse, M.A. Darino, T. Olukayode, D. Reumann, L. Baggaley, A. Djamei, Frontiers in Plant Science 10 (2019).
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2019 | Journal Article | IST-REx-ID: 6778   OA
Evolution of fast root gravitropism in seed plants
Y. Zhang, G. Xiao, X. Wang, X. Zhang, J. Friml, Nature Communications 10 (2019).
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2019 | Journal Article | IST-REx-ID: 7416 View | DOI | PubMed | Europe PMC
 
2019 | Journal Article | IST-REx-ID: 6627   OA View | Files available | DOI | PubMed | Europe PMC
 
2018 | Journal Article | IST-REx-ID: 148   OA
The Chara genome: Secondary complexity and implications for plant terrestrialization
T. Nishiyama, H. Sakayama, J. De Vries, H. Buschmann, D. Saint Marcoux, K. Ullrich, F. Haas, L. Vanderstraeten, D. Becker, D. Lang, S. Vosolsobě, S. Rombauts, P. Wilhelmsson, P. Janitza, R. Kern, A. Heyl, F. Rümpler, L. Calderón Villalobos, J. Clay, R. Skokan, A. Toyoda, Y. Suzuki, H. Kagoshima, E. Schijlen, N. Tajeshwar, B. Catarino, A. Hetherington, A. Saltykova, C. Bonnot, H. Breuninger, A. Symeonidi, G. Radhakrishnan, F. Van Nieuwerburgh, D. Deforce, C. Chang, K. Karol, R. Hedrich, P. Ulvskov, G. Glöckner, C. Delwiche, J. Petrášek, Y. Van De Peer, J. Friml, M. Beilby, L. Dolan, Y. Kohara, S. Sugano, A. Fujiyama, P.M. Delaux, M. Quint, G. Theissen, M. Hagemann, J. Harholt, C. Dunand, S. Zachgo, J. Langdale, F. Maumus, D. Van Der Straeten, S.B. Gould, S. Rensing, Cell 174 (2018) 448–464.e24.
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2018 | Book Chapter | IST-REx-ID: 408
In vitro assay for induction of adventitious rooting on intact arabidopsis hypocotyls
H. Trinh, I. Verstraeten, D. Geelen, in:, Root Development , Springer, 2018, pp. 95–102.
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2018 | Book Chapter | IST-REx-ID: 411
Optimized whole mount in situ immunolocalization for Arabidopsis thaliana root meristems and lateral root primordia
M. Karampelias, R. Tejos, J. Friml, S. Vanneste, in:, D. Ristova, E. Barbez (Eds.), Root Development. Methods and Protocols, Springer, 2018, pp. 131–143.
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2018 | Journal Article | IST-REx-ID: 428   OA
Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane
Y. Salanenka, I. Verstraeten, C. Löfke, K. Tabata, S. Naramoto, M. Glanc, J. Friml, PNAS 115 (2018) 3716–3721.
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2018 | Journal Article | IST-REx-ID: 442   OA View | Files available | DOI
 
2018 | Journal Article | IST-REx-ID: 5830   OA
CLE9 peptide-induced stomatal closure is mediated by abscisic acid, hydrogen peroxide, and nitric oxide in arabidopsis thaliana
L. Zhang, X. Shi, Y. Zhang, J. Wang, J. Yang, T. Ishida, W. Jiang, X. Han, J. Kang, X. Wang, L. Pan, S. Lv, B. Cao, Y. Zhang, J. Wu, H. Han, Z. Hu, L. Cui, S. Sawa, J. He, G. Wang, Plant Cell and Environment (2018).
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2018 | Journal Article | IST-REx-ID: 203   OA
Auxin methylation is required for differential growth in Arabidopsis
M. Abbas, G.J. Hernández, S. Pollmann, S.L. Samodelov, M. Kolb, J. Friml, U.Z. Hammes, M.D. Zurbriggen, M. Blázquez, D. Alabadí, PNAS 115 (2018) 6864–6869.
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