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174 Publications

2019 | Thesis | IST-REx-ID: 6269 | OA
Clathrin-Mediated endocytosis, post-endocytic trafficking and their regulatory controls in plants
M. Narasimhan, Clathrin-Mediated Endocytosis, Post-Endocytic Trafficking and Their Regulatory Controls in Plants , IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6351 | OA
Re-activation of stem cell pathways for pattern restoration in plant wound healing
P. Marhavá, L. Hörmayer, S. Yoshida, P. Marhavý, E. Benková, J. Friml, Cell 177 (2019) 957–969.e13.
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2019 | Journal Article | IST-REx-ID: 6366 | OA
A mobile auxin signal connects temperature sensing in cotyledons with growth responses in hypocotyls
J. Bellstaedt, J. Trenner, R. Lippmann, Y. Poeschl, X. Zhang, J. Friml, M. Quint, C. Delker, Plant Physiology 180 (2019) 757–766.
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2019 | Journal Article | IST-REx-ID: 6377
Disruption of endocytosis through chemical inhibition of clathrin heavy chain function
W. Dejonghe, I. Sharma, B. Denoo, S. De Munck, Q. Lu, K. Mishev, H. Bulut, E. Mylle, R. De Rycke, M.K. Vasileva, D.V. Savatin, W. Nerinckx, A. Staes, A. Drozdzecki, D. Audenaert, K. Yperman, A. Madder, J. Friml, D. Van Damme, K. Gevaert, V. Haucke, S.N. Savvides, J. Winne, E. Russinova, Nature Chemical Biology 15 (2019) 641–649.
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2019 | Journal Article | IST-REx-ID: 6504
Auxin-mediated statolith production for root gravitropism
Y. Zhang, P. He, X. Ma, Z. Yang, C. Pang, J. Yu, G. Wang, J. Friml, G. Xiao, New Phytologist 224 (2019) 761–774.
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2019 | Journal Article | IST-REx-ID: 6611 | OA
PIN2 polarity establishment in arabidopsis in the absence of an intact cytoskeleton
M. Glanc, M. Fendrych, J. Friml, Biomolecules 9 (2019).
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2019 | Journal Article | IST-REx-ID: 6627 | OA View | Files available | DOI | PubMed | Europe PMC
 
2019 | Journal Article | IST-REx-ID: 6778 | OA
Evolution of fast root gravitropism in seed plants
Y. Zhang, G. Xiao, X. Wang, X. Zhang, J. Friml, Nature Communications 10 (2019).
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2019 | Journal Article | IST-REx-ID: 6943 | OA
Targeted cell ablation-based insights into wound healing and restorative patterning
L. Hörmayer, J. Friml, Current Opinion in Plant Biology 52 (2019) 124–130.
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2019 | Journal Article | IST-REx-ID: 6999 | OA
Salicylic acid-mediated plasmodesmal closure via Remorin-dependent lipid organization
D. Huang, Y. Sun, Z. Ma, M. Ke, Y. Cui, Z. Chen, C. Chen, C. Ji, T. Tran, L. Yang, S. Lam, Y. Han, G. Shu, J. Friml, Y. Miao, L. Jiang, X. Chen, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 21274–21284.
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2019 | Journal Article | IST-REx-ID: 7106
PIN-driven auxin transport emerged early in streptophyte evolution
R. Skokan, E. Medvecká, T. Viaene, S. Vosolsobě, M. Zwiewka, K. Müller, P. Skůpa, M. Karady, Y. Zhang, D.P. Janacek, U.Z. Hammes, K. Ljung, T. Nodzyński, J. Petrášek, J. Friml, Nature Plants 5 (2019) 1114–1119.
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2018 | Journal Article | IST-REx-ID: 203 | OA
Auxin methylation is required for differential growth in Arabidopsis
M. Abbas, G.J. Hernández, S. Pollmann, S.L. Samodelov, M. Kolb, J. Friml, U.Z. Hammes, M.D. Zurbriggen, M. Blázquez, D. Alabadí, PNAS 115 (2018) 6864–6869.
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2018 | Book Chapter | IST-REx-ID: 408
In vitro assay for induction of adventitious rooting on intact arabidopsis hypocotyls
H. Trinh, I. Verstraeten, D. Geelen, in:, Root Development , Springer, 2018, pp. 95–102.
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2018 | Book Chapter | IST-REx-ID: 411
Optimized whole mount in situ immunolocalization for Arabidopsis thaliana root meristems and lateral root primordia
M. Karampelias, R. Tejos, J. Friml, S. Vanneste, in:, D. Ristova, E. Barbez (Eds.), Root Development. Methods and Protocols, Springer, 2018, pp. 131–143.
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2018 | Journal Article | IST-REx-ID: 412 | OA
A functional study of AUXILIN LIKE1 and 2 two putative clathrin uncoating factors in Arabidopsis
M. Adamowski, M. Narasimhan, U. Kania, M. Glanc, G. De Jaeger, J. Friml, The Plant Cell 30 (2018) 700–716.
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2018 | Journal Article | IST-REx-ID: 428 | OA
Gibberellin DELLA signaling targets the retromer complex to redirect protein trafficking to the plasma membrane
Y. Salanenka, I. Verstraeten, C. Löfke, K. Tabata, S. Naramoto, M. Glanc, J. Friml, PNAS 115 (2018) 3716–3721.
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2018 | Journal Article | IST-REx-ID: 442 | OA View | Files available | DOI
 
2018 | Journal Article | IST-REx-ID: 449 | OA
WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity
T. Prat, J. Hajny, W. Grunewald, M.K. Vasileva, G. Molnar, R. Tejos, M. Schmid, M. Sauer, J. Friml, PLoS Genetics 14 (2018).
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2018 | Journal Article | IST-REx-ID: 462 | OA
NHX antiporters regulate the pH of endoplasmic reticulum and auxin-mediated development
L. Fan, L. Zhao, W. Hu, W. Li, O. Novák, M. Strnad, S. Simon, J. Friml, J. Shen, L. Jiang, Q. Qiu, Plant, Cell and Environment 41 (2018) 850–864.
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2018 | Journal Article | IST-REx-ID: 5673 | OA
Mechanistic framework for cell-intrinsic re-establishment of PIN2 polarity after cell division
M. Glanc, M. Fendrych, J. Friml, Nature Plants 4 (2018) 1082–1088.
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2018 | Journal Article | IST-REx-ID: 5830 | OA
CLE9 peptide-induced stomatal closure is mediated by abscisic acid, hydrogen peroxide, and nitric oxide in arabidopsis thaliana
L. Zhang, X. Shi, Y. Zhang, J. Wang, J. Yang, T. Ishida, W. Jiang, X. Han, J. Kang, X. Wang, L. Pan, S. Lv, B. Cao, Y. Zhang, J. Wu, H. Han, Z. Hu, L. Cui, S. Sawa, J. He, G. Wang, Plant Cell and Environment (2018).
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2018 | Journal Article | IST-REx-ID: 280
KIRA1 and ORESARA1 terminate flower receptivity by promoting cell death in the stigma of Arabidopsis
Z. Gao, A. Daneva, Y. Salanenka, M. Van Durme, M. Huysmans, Z. Lin, F. De Winter, S. Vanneste, M. Karimi, J. Van De Velde, K. Vandepoele, D. Van De Walle, K. Dewettinck, B. Lambrecht, M. Nowack, Nature Plants 4 (2018) 365–375.
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2018 | Journal Article | IST-REx-ID: 158 | OA
Maternal auxin supply contributes to early embryo patterning in Arabidopsis
H. Robert, C. Park, C. Gutièrrez, B. Wójcikowska, A. Pěnčík, O. Novák, J. Chen, W. Grunewald, T. Dresselhaus, J. Friml, T. Laux, Nature Plants 4 (2018) 548–553.
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2018 | Journal Article | IST-REx-ID: 191 | OA
PID/WAG-mediated phosphorylation of the Arabidopsis PIN3 auxin transporter mediates polarity switches during gravitropism
P. Grones, M.F. Abas, J. Hajny, A. Jones, S. Waidmann, J. Kleine Vehn, J. Friml, Scientific Reports 8 (2018).
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2018 | Journal Article | IST-REx-ID: 192 | OA
Rapid and reversible root growth inhibition by TIR1 auxin signalling
M. Fendrych, M. Akhmanova, J. Merrin, M. Glanc, S. Hagihara, K. Takahashi, N. Uchida, K.U. Torii, J. Friml, Nature Plants 4 (2018) 453–459.
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2018 | Journal Article | IST-REx-ID: 913 | OA
PATELLINS are regulators of auxin mediated PIN1 relocation and plant development in Arabidopsis thaliana
R. Tejos, C. Rodríguez Furlán, M. Adamowski, M. Sauer, L. Norambuena, J. Friml, Journal of Cell Science 131 (2018).
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2018 | Journal Article | IST-REx-ID: 14 | OA
Relative contribution of PIN-containing secretory vesicles and plasma membrane PINs to the directed auxin transport: Theoretical estimation
S. Hille, M. Akhmanova, M. Glanc, A.J. Johnson, J. Friml, International Journal of Molecular Sciences 19 (2018).
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2018 | Journal Article | IST-REx-ID: 146 | OA
The dynamics of root cap sloughing in Arabidopsis is regulated by peptide signalling
C.L. Shi, D. von Wangenheim, U. Herrmann, M. Wildhagen, I. Kulik, A. Kopf, T. Ishida, V. Olsson, M.K. Anker, M. Albert, M.A. Butenko, G. Felix, S. Sawa, M. Claassen, J. Friml, R.B. Aalen, Nature Plants 4 (2018) 596–604.
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2018 | Journal Article | IST-REx-ID: 147 | OA
The inhibitor Endosidin 4 targets SEC7 domain-type ARF GTPase exchange factors and interferes with sub cellular trafficking in eukaryotes
U. Kania, T. Nodzyński, Q. Lu, G.R. Hicks, W. Nerinckx, K. Mishev, F. Peurois, J. Cherfils, R.R.M. De, P. Grones, S. Robert, E. Russinova, J. Friml, The Plant Cell 30 (2018) 2553–2572.
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2018 | Journal Article | IST-REx-ID: 148 | OA
The Chara genome: Secondary complexity and implications for plant terrestrialization
T. Nishiyama, H. Sakayama, J. De Vries, H. Buschmann, D. Saint Marcoux, K. Ullrich, F. Haas, L. Vanderstraeten, D. Becker, D. Lang, S. Vosolsobě, S. Rombauts, P. Wilhelmsson, P. Janitza, R. Kern, A. Heyl, F. Rümpler, L. Calderón Villalobos, J. Clay, R. Skokan, A. Toyoda, Y. Suzuki, H. Kagoshima, E. Schijlen, N. Tajeshwar, B. Catarino, A. Hetherington, A. Saltykova, C. Bonnot, H. Breuninger, A. Symeonidi, G. Radhakrishnan, F. Van Nieuwerburgh, D. Deforce, C. Chang, K. Karol, R. Hedrich, P. Ulvskov, G. Glöckner, C. Delwiche, J. Petrášek, Y. Van De Peer, J. Friml, M. Beilby, L. Dolan, Y. Kohara, S. Sugano, A. Fujiyama, P.M. Delaux, M. Quint, G. Theissen, M. Hagemann, J. Harholt, C. Dunand, S. Zachgo, J. Langdale, F. Maumus, D. Van Der Straeten, S.B. Gould, S. Rensing, Cell 174 (2018) 448–464.e24.
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2018 | Journal Article | IST-REx-ID: 36 | OA
Temperature-induced changes in the wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms
L. Vu, T. Zhu, I. Verstraeten, B. Van De Cotte, K. Gevaert, I. De Smet, Journal of Experimental Botany 69 (2018) 4609–4624.
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2017 | Journal Article | IST-REx-ID: 722 | OA
Shaping 3D root system architecture
E. Morris, M. Griffiths, A. Golebiowska, S. Mairhofer, J. Burr Hersey, T. Goh, D. von Wangenheim, B. Atkinson, C. Sturrock, J. Lynch, K. Vissenberg, K. Ritz, D. Wells, S. Mooney, M. Bennett, Current Biology 27 (2017) R919–R930.
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2017 | Book Chapter | IST-REx-ID: 545 | OA
Vascular tissue development and regeneration in the model plant arabidopsis
E. Mazur, J. Friml, in:, S. Jurić (Ed.), Plant Engineering, InTech, 2017, pp. 113–140.
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2017 | Research Data | IST-REx-ID: 5565 | OA
Light Sheet Fluorescence microscopy of plant roots growing on the surface of a gel
D. von Wangenheim, R. Hauschild, J. Friml, Light Sheet Fluorescence Microscopy of Plant Roots Growing on the Surface of a Gel, IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 572 | OA
Control of endogenous auxin levels in plant root development
D. Olatunji, D. Geelen, I. Verstraeten, International Journal of Molecular Sciences 18 (2017).
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2017 | Journal Article | IST-REx-ID: 657 | OA
Auxin response cell autonomously controls ground tissue initiation in the early arabidopsis embryo
B. Möller, C. Ten Hove, D. Xiang, N. Williams, L. López, S. Yoshida, M. Smit, R. Datla, D. Weijers, PNAS 114 (2017) E2533–E2539.
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2017 | Journal Article | IST-REx-ID: 669 | OA
EXO70C2 is a key regulatory factor for optimal tip growth of pollen
L. Synek, N. Vukašinović, I. Kulich, M. Hála, K. Aldorfová, M. Fendrych, V. Žárský, Plant Physiology 174 (2017) 223–240.
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2017 | Journal Article | IST-REx-ID: 799 | OA
BEN3/BIG2 ARF GEF is involved in brefeldin a-sensitive trafficking at the trans-Golgi network/early endosome in Arabidopsis thaliana
S. Kitakura, M. Adamowski, Y. Matsuura, L. Santuari, H. Kouno, K. Arima, C. Hardtke, J. Friml, T. Kakimoto, H. Tanaka, Plant and Cell Physiology 58 (2017).
View | Files available | DOI | PubMed | Europe PMC
 
2017 | Thesis | IST-REx-ID: 938 | OA
Investigations into cell polarity and trafficking in the plant model Arabidopsis thaliana
M. Adamowski, Investigations into Cell Polarity and Trafficking in the Plant Model Arabidopsis Thaliana , IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 946 | OA
Live tracking of moving samples in confocal microscopy for vertically grown roots
D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 1078 | OA
Light sheet fluorescence microscopy of plant roots growing on the surface of a gel
D. Von Wangenheim, R. Hauschild, J. Friml, Journal of Visualized Experiments JoVE 2017 (2017) e55044.
View | Files available | DOI
 
2017 | Journal Article | IST-REx-ID: 1110 | OA
Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity
B. Kuhn, T. Nodzyński, S. Errafi, R. Bucher, S. Gupta, B. Aryal, P. Dobrev, L. Bigler, M. Geisler, E. Zažímalová, J. Friml, C. Ringli, Scientific Reports 7 (2017).
View | Files available | DOI
 
2017 | Thesis | IST-REx-ID: 1127
Identification of novel regulators of PIN polarity and development of novel auxin sensor
T. Prat, Identification of Novel Regulators of PIN Polarity and Development of Novel Auxin Sensor, IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 1159 | OA
Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation
W. Steenackers, P. Klíma, M. Quareshy, I. Cesarino, R. Kumpf, S. Corneillie, P. Araújo, T. Viaene, G. Goeminne, M. Nowack, K. Ljung, J. Friml, J. Blakeslee, O. Novák, E. Zažímalová, R. Napier, W. Boerjan, B. Vanholme, Plant Physiology 173 (2017) 552–565.
View | Files available | DOI | PubMed | Europe PMC
 
2016 | Journal Article | IST-REx-ID: 510 | OA
The CLE gene family in Populus trichocarpa
Z. Liu, N. Yang, Y. Lv, L. Pan, S. Lv, H. Han, G. Wang, Plant Signaling & Behavior 11 (2016).
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2016 | Journal Article | IST-REx-ID: 1641 | OA
A forward genetic screen for new regulators of auxin mediated degradation of auxin transport proteins in Arabidopsis thaliana
R. Zemová, M. Zwiewka, A. Bielach, H. Robert, J. Friml, Journal of Plant Growth Regulation 35 (2016) 465–476.
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1212 | OA
Termination of shoot gravitropic responses by auxin feedback on PIN3 polarity
H. Rakusová, M. Abbas, H. Han, S. Song, H. Robert, J. Friml, Current Biology 26 (2016) 3026–3032.
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2016 | Journal Article | IST-REx-ID: 1221 | OA View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1238 | OA
Endosomal interactions during root hair growth
D. von Wangenheim, A. Rosero, G. Komis, O. Šamajová, M. Ovečka, B. Voigt, J. Šamaj, Frontiers in Plant Science 6 (2016).
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1247 | OA
ROTUNDA3 function in plant development by phosphatase 2A-mediated regulation of auxin transporter recycling
M. Karampelias, P. Neyt, S. De Groeve, S. Aesaert, G. Coussens, J. Rolčík, L. Bruno, N. De Winne, A. Van Minnebruggen, M. Van Montagu, M. Ponce, J. Micol, J. Friml, G. De Jaeger, M. Van Lijsebettens, PNAS 113 (2016) 2768–2773.
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2016 | Journal Article | IST-REx-ID: 1251 | OA
TWISTED DWARF1 mediates the action of auxin transport inhibitors on actin cytoskeleton dynamics
J. Zhu, A. Bailly, M. Zwiewka, V. Sovero, M. Di Donato, P. Ge, J. Oehri, B. Aryal, P. Hao, M. Linnert, N. Burgardt, C. Lücke, M. Weiwad, M. Michel, O. Weiergräber, S. Pollmann, E. Azzarello, S. Mancuso, N. Ferro, Y. Fukao, C. Hoffmann, R. Wedlich Söldner, J. Friml, C. Thomas, M. Geisler, Plant Cell 28 (2016) 930–948.
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2016 | Journal Article | IST-REx-ID: 1264 | OA
Sorting motifs involved in the trafficking and localization of the PIN1 auxin efflux carrier
G. Sancho Andrés, E. Soriano Ortega, C. Gao, J. Bernabé Orts, M. Narasimhan, A. Müller, R. Tejos, L. Jiang, J. Friml, F. Aniento, M. Marcote, Plant Physiology 171 (2016) 1965–1982.
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2016 | Journal Article | IST-REx-ID: 1274 | OA
Vascular cambium regeneration and vessel formation in wounded inflorescence stems of Arabidopsis
E. Mazur, E. Benková, J. Friml, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1277 | OA
Danger-associated peptide signaling in Arabidopsis requires clathrin
F. Ortiz Morea, D. Savatin, W. Dejonghe, R. Kumar, Y. Luo, M. Adamowski, J. Van Begin, K. Dressano, G. De Oliveira, X. Zhao, Q. Lu, A. Madder, J. Friml, D. De Moura, E. Russinova, PNAS 113 (2016) 11028–11033.
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2016 | Journal Article | IST-REx-ID: 1344 | OA View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1345 | OA
Plasma membrane: Negative attraction
G. Molnar, M. Fendrych, J. Friml, Nature Plants 2 (2016).
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2016 | Journal Article | IST-REx-ID: 1346 | OA
Mitochondrial uncouplers inhibit clathrin-mediated endocytosis largely through cytoplasmic acidification
W. Dejonghe, S. Kuenen, E. Mylle, M.K. Vasileva, O. Keech, C. Viotti, J. Swerts, M. Fendrych, F. Ortiz Morea, K. Mishev, S. Delang, S. Scholl, X. Zarza, M. Heilmann, J. Kourelis, J. Kasprowicz, L. Nguyen, A. Drozdzecki, I. Van Houtte, A. Szatmári, M. Majda, G. Baisa, S. Bednarek, S. Robert, D. Audenaert, C. Testerink, T. Munnik, D. Van Damme, I. Heilmann, K. Schumacher, J. Winne, J. Friml, P. Verstreken, E. Russinova, Nature Communications 7 (2016).
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1372 | OA
Cytokinins influence root gravitropism via differential regulation of auxin transporter expression and localization in Arabidopsis
M. Pernisová, T. Prat, P. Grones, D. Haruštiaková, M. Matonohova, L. Spíchal, T. Nodzyński, J. Friml, J. Hejátko, New Phytologist 212 (2016) 497–509.
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1410 | OA
Phosphatidylinositol 4-phosphate 5-kinases 1 and 2 are involved in the regulation of vacuole morphology during Arabidopsis thaliana pollen development
J. Ugalde, C. Rodríguez Furlán, R. De Rycke, L. Norambuena, J. Friml, G. León, R. Tejos, Plant Science 250 (2016) 10–19.
View | Files available | DOI | PubMed | Europe PMC
 
2016 | Journal Article | IST-REx-ID: 1417 | OA
PIN6 auxin transporter at endoplasmic reticulum and plasma membrane mediates auxin homeostasis and organogenesis in Arabidopsis
S. Simon, P. Skůpa, T. Viaene, M. Zwiewka, R. Tejos, P. Klíma, M. Čarná, J. Rolčík, R. De Rycke, I. Moreno, P. Dobrev, A. Orellana, E. Zažímalová, J. Friml, New Phytologist 211 (2016) 65–74.
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1482 | OA View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1484 | OA
Environmental and endogenous control of cortical microtubule orientation
X. Chen, S. Wu, Z. Liu, J. Friml, Trends in Cell Biology 26 (2016) 409–419.
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2016 | Journal Article | IST-REx-ID: 1081 | OA
Cellular mechanisms for cargo delivery and polarity maintenance at different polar domains in plant cells
Ł. Łangowski, K.T. Wabnik, H. Li, S. Vanneste, S. Naramoto, H. Tanaka, J. Friml, Cell Discovery 2 (2016).
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1145 | OA
Enquiry into the topology of plasma membrane localized PIN auxin transport components
T. Nodzyński, S. Vanneste, M. Zwiewka, M. Pernisová, J. Hejátko, J. Friml, Molecular Plant 9 (2016) 1504–1519.
View | Files available | DOI
 
2016 | Journal Article | IST-REx-ID: 1147 | OA
Auxin flow mediated competition between axillary buds to restore apical dominance
J. Balla, Z. Medved’Ová, P. Kalousek, N. Matiješčuková, J. Friml, V. Reinöhl, S. Procházka, Scientific Reports 6 (2016).
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2016 | Journal Article | IST-REx-ID: 1151 | OA
A noncanonical auxin sensing mechanism is required for organ morphogenesis in arabidopsis
S. Simonini, J. Deb, L. Moubayidin, P. Stephenson, M. Valluru, A. Freire Rios, K. Sorefan, D. Weijers, J. Friml, L. Östergaard, Genes and Development 30 (2016) 2286–2296.
View | Files available | DOI | PubMed | Europe PMC
 
2016 | Journal Article | IST-REx-ID: 1153 | OA
A model of differential growth guided apical hook formation in plants
P. Žádníková, K.T. Wabnik, A. Abuzeineh, M. Gallemí, D. Van Der Straeten, R. Smith, D. Inze, J. Friml, P. Prusinkiewicz, E. Benková, Plant Cell 28 (2016) 2464–2477.
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2015 | Journal Article | IST-REx-ID: 532
EIN2-directed translational regulation of ethylene signaling in arabidopsis
W. Li, M. Ma, Y. Feng, H. Li, Y. Wang, Y. Ma, M. Li, F. An, H. Guo, Cell 163 (2015) 670–683.
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2015 | Journal Article | IST-REx-ID: 1543
A conserved core of programmed cell death indicator genes discriminates developmentally and environmentally induced programmed cell death in plants
Y. Olvera Carrillo, M. Van Bel, T. Van Hautegem, M. Fendrych, M. Huysmans, M. Šimášková, M. Van Durme, P. Buscaill, S. Rivas, N. Coll, F. Coppens, S. Maere, M. Nowack, Plant Physiology 169 (2015) 2684–2699.
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2015 | Journal Article | IST-REx-ID: 1554 | OA
Reporters for sensitive and quantitative measurement of auxin response
C. Liao, W. Smet, G. Brunoud, S. Yoshida, T. Vernoux, D. Weijers, Nature Methods 12 (2015) 207–210.
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2015 | Journal Article | IST-REx-ID: 1556 | OA
The Arabidopsis thaliana elongator complex subunit 2 epigenetically affects root development
Y. Jia, H. Tian, H. Li, Q. Yu, L. Wang, J. Friml, Z. Ding, Journal of Experimental Botany 66 (2015) 4631–4642.
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2015 | Journal Article | IST-REx-ID: 1558
The cyclophilin a DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation
M. Ivanchenko, J. Zhu, B. Wang, E. Medvecka, Y. Du, E. Azzarello, S. Mancuso, M. Megraw, S. Filichkin, J. Dubrovsky, J. Friml, M. Geisler, Development 142 (2015) 712–721.
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2015 | Journal Article | IST-REx-ID: 1562
Auxin-binding pocket of ABP1 is crucial for its gain-of-function cellular and developmental roles
P. Grones, X. Chen, S. Simon, W. Kaufmann, R. De Rycke, T. Nodzyński, E. Zažímalová, J. Friml, Journal of Experimental Botany 66 (2015) 5055–5065.
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2015 | Journal Article | IST-REx-ID: 1569 | OA
An early secretory pathway mediated by gnom-like 1 and gnom is essential for basal polarity establishment in Arabidopsis thaliana
S. Doyle, A. Haegera, T. Vain, A. Rigala, C. Viotti, M. Łangowskaa, Q. Maa, J. Friml, N. Raikhel, G. Hickse, S. Robert, PNAS 112 (2015) E806–E815.
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2015 | Journal Article | IST-REx-ID: 1574 | OA
A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development
Q. Chen, Y. Liu, S. Maere, E. Lee, G. Van Isterdael, Z. Xie, W. Xuan, J. Lucas, V. Vassileva, S. Kitakura, P. Marhavý, K.T. Wabnik, N. Geldner, E. Benková, J. Le, H. Fukaki, E. Grotewold, C. Li, J. Friml, F. Sack, T. Beeckman, S. Vanneste, Nature Communications 6 (2015).
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2015 | Journal Article | IST-REx-ID: 1591 | OA
PIN-dependent auxin transport: Action, regulation, and evolution
M. Adamowski, J. Friml, Plant Cell 27 (2015) 20–32.
View | Files available | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2015 | Journal Article | IST-REx-ID: 1640 | OA
Cytokinin response factors regulate PIN-FORMED auxin transporters
M. Šimášková, J. O’Brien, M. Khan-Djamei, G. Van Noorden, K. Ötvös, A. Vieten, I. De Clercq, J. Van Haperen, C. Cuesta, K. Hoyerová, S. Vanneste, P. Marhavý, K.T. Wabnik, F. Van Breusegem, M. Nowack, A. Murphy, J. Friml, D. Weijers, T. Beeckman, E. Benková, Nature Communications 6 (2015).
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2015 | Journal Article | IST-REx-ID: 1819
Osmotic stress modulates the balance between exocytosis and clathrin mediated endocytosis in Arabidopsis thaliana
M. Zwiewka, T. Nodzyński, S. Robert, S. Vanneste, J. Friml, Molecular Plant 8 (2015) 1175–1187.
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2015 | Journal Article | IST-REx-ID: 1847
ABP1: Finally docking
P. Grones, J. Friml, Molecular Plant 8 (2015) 356–358.
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2015 | Journal Article | IST-REx-ID: 1849
Calcium is an organizer of cell polarity in plants
E. Himschoot, T. Beeckman, J. Friml, S. Vanneste, Biochimica et Biophysica Acta - Molecular Cell Research 1853 (2015) 2168–2172.
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2015 | Journal Article | IST-REx-ID: 1865
Plant embryogenesis requires AUX/LAX-mediated auxin influx
H. Robert, W. Grunewald, M. Sauer, B. Cannoot, M. Soriano, R. Swarup, D. Weijers, M. Bennett, K. Boutilier, J. Friml, Development 142 (2015) 702–711.
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2015 | Journal Article | IST-REx-ID: 1871 | OA
Auxin transporters and binding proteins at a glance
P. Grones, J. Friml, Journal of Cell Science 128 (2015) 1–7.
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2015 | Journal Article | IST-REx-ID: 1878 View | DOI
 
2015 | Journal Article | IST-REx-ID: 1879 | OA
Developing 3D SEM in a broad biological context
A. Kremer, S. Lippens, S. Bartunkova, B. Asselbergh, C. Blanpain, M. Fendrych, A. Goossens, M. Holt, S. Janssens, M. Krols, J. Larsimont, C. Mc Guire, M. Nowack, X. Saelens, A. Schertel, B. Schepens, M. Slezak, V. Timmerman, C. Theunis, R. Van Brempt, Y. Visser, C. Guérin, Journal of Microscopy 259 (2015) 80–96.
View | Files available | DOI
 
2015 | Journal Article | IST-REx-ID: 1944
Intracellular trafficking and PIN-mediated cell polarity during tropic responses in plants
H. Rakusová, M. Fendrych, J. Friml, Current Opinion in Plant Biology 23 (2015) 116–123.
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2015 | Journal Article | IST-REx-ID: 1383 | OA
V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis
L. Yu, S. Scholl, A. Doering, Z. Yi, N. Irani, S. Di Rubbo, L. Neumetzler, P. Krishnamoorthy, I. Van Houtte, E. Mylle, V. Bischoff, S. Vernhettes, J. Winne, J. Friml, Y. Stierhof, K. Schumacher, S. Persson, E. Russinova, Nature Plants 1 (2015) 15094.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2015 | Journal Article | IST-REx-ID: 1509 | OA
Embryo-lethal phenotypes in early abp1 mutants are due to disruption of the neighboring BSM gene
J. Michalko, M. Lukacisinova, M.T. Bollenbach, J. Friml, F1000 Research 4 (2015).
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2015 | Journal Article | IST-REx-ID: 1534 | OA
Transcriptional regulation of PIN genes by FOUR LIPS and MYB88 during Arabidopsis root gravitropism
H. Wang, K. Yang, J. Zou, L. Zhu, Z. Xie, M. Morita, M. Tasaka, J. Friml, E. Grotewold, T. Beeckman, S. Vanneste, F. Sack, J. Le, Nature Communications 6 (2015).
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2015 | Journal Article | IST-REx-ID: 1536
Asymmetric localizations of the ABC transporter PaPDR1 trace paths of directional strigolactone transport
J. Sasse, S. Simon, C. Gübeli, G. Liu, X. Cheng, J. Friml, H. Bouwmeester, E. Martinoia, L. Borghi, Current Biology 25 (2015) 647–655.
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2014 | Journal Article | IST-REx-ID: 1994
Directional auxin transport mechanisms in early diverging land plants
T. Viaene, K. Landberg, M. Thelander, E. Medvecka, E. Pederson, E. Feraru, E. Cooper, M. Karimi, C. Delwiche, K. Ljung, M. Geisler, E. Sundberg, J. Friml, Current Biology 24 (2014) 2786–2791.
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2014 | Journal Article | IST-REx-ID: 1996 | OA
Bimodal regulation of ICR1 levels generates self-organizing auxin distribution
O. Hazak, U. Obolski, T. Prat, J. Friml, L. Hadany, S. Yalovsky, PNAS 111 (2014) E5471–E5479.
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2014 | Journal Article | IST-REx-ID: 2061
Cellular events during interfascicular cambium ontogenesis in inflorescence stems of Arabidopsis
E. Mazur, E. Kurczyñska, J. Friml, Protoplasma 251 (2014) 1125–1139.
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2014 | Journal Article | IST-REx-ID: 2188 | OA
Polar delivery in plants; commonalities and differences to animal epithelial cells
U. Kania, M. Fendrych, J. Friml, Open Biology 4 (2014).
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2014 | Journal Article | IST-REx-ID: 2222
VAN4 encodes a putative TRS120 that is required for normal cell growth and vein development in arabidopsis
S. Naramoto, T. Nodzyński, T. Dainobu, H. Takatsuka, T. Okada, J. Friml, H. Fukuda, Plant and Cell Physiology 55 (2014) 750–763.
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2014 | Journal Article | IST-REx-ID: 2223 | OA
BEX1/ARF1A1C is required for BFA-sensitive recycling of PIN auxin transporters and auxin-mediated development in arabidopsis
H. Tanaka, T. Nodzyński, S. Kitakura, M. Feraru, M. Sasabe, T. Ishikawa, J. Kleine Vehn, T. Kakimoto, J. Friml, Plant and Cell Physiology 55 (2014) 737–749.
View | Files available | DOI | Download Published Version (ext.)
 
2014 | Journal Article | IST-REx-ID: 2240
The TPLATE adaptor complex drives clathrin-mediated endocytosis in plants
A. Gadeyne, C. Sánchez Rodríguez, S. Vanneste, S. Di Rubbo, H. Zauber, K. Vanneste, J. Van Leene, N. De Winne, D. Eeckhout, G. Persiau, E. Van De Slijke, B. Cannoot, L. Vercruysse, J. Mayers, M. Adamowski, U. Kania, M. Ehrlich, A. Schweighofer, T. Ketelaar, S. Maere, S. Bednarek, J. Friml, K. Gevaert, E. Witters, E. Russinova, S. Persson, G. De Jaeger, D. Van Damme, Cell 156 (2014) 691–704.
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2014 | Book Chapter | IST-REx-ID: 2245
Analyzing the in vivo status of exogenously applied auxins: A HPLC-based method to characterize the intracellularly localized auxin transporters
S. Simon, P. Skůpa, P. Dobrev, J. Petrášek, E. Zažímalová, J. Friml, in:, G. Hicks, S. Robert (Eds.), Plant Chemical Genomics, Springer, 2014, pp. 255–264.
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2014 | Journal Article | IST-REx-ID: 2249 | OA
Inter-regulation of the unfolded protein response and auxin signaling
Y. Chen, K. Aung, J. Rolčík, K. Walicki, J. Friml, F. Brandizzí, Plant Journal 77 (2014) 97–107.
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2014 | Journal Article | IST-REx-ID: 2253 | OA
Expression of TWISTED DWARF1 lacking its in-plane membrane anchor leads to increased cell elongation and hypermorphic growth
A. Bailly, B. Wang, M. Zwiewka, S. Pollmann, D. Schenck, H. Lüthen, A. Schulz, J. Friml, M. Geisler, Plant Journal 77 (2014) 108–118.
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2014 | Book Chapter | IST-REx-ID: 1806
Auxin on the road navigated by cellular PIN polarity
P. Baster, J. Friml, in:, E. Zažímalová, J. Petrášek, E. Benková (Eds.), Auxin and Its Role in Plant Development, Springer, 2014, pp. 143–170.
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