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3935 Publications
2022 | Conference Paper | IST-REx-ID: 11180 |

Multi-queues can be state-of-the-art priority schedulers
A. Postnikova, N. Koval, G. Nadiradze, D.-A. Alistarh, in:, Proceedings of the 27th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, Association for Computing Machinery, 2022, pp. 353–367.
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A. Postnikova, N. Koval, G. Nadiradze, D.-A. Alistarh, in:, Proceedings of the 27th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, Association for Computing Machinery, 2022, pp. 353–367.
2022 | Journal Article | IST-REx-ID: 11182 |

Quantifying the probing and selection of microenvironmental pores by motile immune cells
J. Kroll, M.J.A. Ruiz-Fernandez, M.B. Braun, J. Merrin, J. Renkawitz, Current Protocols 2 (2022).
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J. Kroll, M.J.A. Ruiz-Fernandez, M.B. Braun, J. Merrin, J. Renkawitz, Current Protocols 2 (2022).
2022 | Conference Paper | IST-REx-ID: 11183 |

Beyond distributed subgraph detection: Induced subgraphs, multicolored problems and graph parameters
A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Conference Paper | IST-REx-ID: 11184 |

Fast graphical population protocols
D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
2022 | Conference Paper | IST-REx-ID: 11185 |

Approximating the bundled crossing number
A.M. Arroyo Guevara, S. Felsner, in:, WALCOM 2022: Algorithms and Computation, Springer Nature, 2022, pp. 383–395.
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A.M. Arroyo Guevara, S. Felsner, in:, WALCOM 2022: Algorithms and Computation, Springer Nature, 2022, pp. 383–395.
2022 | Journal Article | IST-REx-ID: 11186 |

Large deviations in random latin squares
M.A. Kwan, A. Sah, M. Sawhney, Bulletin of the London Mathematical Society (2022).
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M.A. Kwan, A. Sah, M. Sawhney, Bulletin of the London Mathematical Society (2022).
2022 | Journal Article | IST-REx-ID: 11187 |

Unlocking capacities of genomics for the COVID-19 response and future pandemics
Knyazev S, Chhugani K, Sarwal V, Ayyala R, Singh H, Karthikeyan S, Deshpande D, Baykal PI, Comarova Z, Lu A, Porozov Y, Vasylyeva TI, Wertheim JO, Tierney BT, Chiu CY, Sun R, Wu A, Abedalthagafi MS, Pak VM, Nagaraj SH, Smith AL, Skums P, Pasaniuc B, Komissarov A, Mason CE, Bortz E, Lemey P, Kondrashov F, Beerenwinkel N, Lam TTY, Wu NC, Zelikovsky A, Knight R, Crandall KA, Mangul S. 2022. Unlocking capacities of genomics for the COVID-19 response and future pandemics. Nature Methods. 19(4), 374–380.
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Knyazev S, Chhugani K, Sarwal V, Ayyala R, Singh H, Karthikeyan S, Deshpande D, Baykal PI, Comarova Z, Lu A, Porozov Y, Vasylyeva TI, Wertheim JO, Tierney BT, Chiu CY, Sun R, Wu A, Abedalthagafi MS, Pak VM, Nagaraj SH, Smith AL, Skums P, Pasaniuc B, Komissarov A, Mason CE, Bortz E, Lemey P, Kondrashov F, Beerenwinkel N, Lam TTY, Wu NC, Zelikovsky A, Knight R, Crandall KA, Mangul S. 2022. Unlocking capacities of genomics for the COVID-19 response and future pandemics. Nature Methods. 19(4), 374–380.
2022 | Thesis | IST-REx-ID: 11193
Transcriptional regulation by Dfos and BMP-signaling support tissue invasion of Drosophila immune cells
S. Wachner, Transcriptional Regulation by Dfos and BMP-Signaling Support Tissue Invasion of Drosophila Immune Cells, ISTA, 2022.
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S. Wachner, Transcriptional Regulation by Dfos and BMP-Signaling Support Tissue Invasion of Drosophila Immune Cells, ISTA, 2022.
2022 | Thesis | IST-REx-ID: 11196
Nanoarchitecture of hippocampal mossy fiber-CA3 pyramidal neuron synapses
O. Kim, Nanoarchitecture of Hippocampal Mossy Fiber-CA3 Pyramidal Neuron Synapses, ISTA, 2022.
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O. Kim, Nanoarchitecture of Hippocampal Mossy Fiber-CA3 Pyramidal Neuron Synapses, ISTA, 2022.
2022 | Conference Paper | IST-REx-ID: 11331 |

Narwhal and Tusk: A DAG-based mempool and efficient BFT consensus
G. Danezis, E. Kokoris Kogias, A. Sonnino, A. Spiegelman, in:, Proceedings of the 17th European Conference on Computer Systems, Association for Computing Machinery, 2022, pp. 34–50.
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G. Danezis, E. Kokoris Kogias, A. Sonnino, A. Spiegelman, in:, Proceedings of the 17th European Conference on Computer Systems, Association for Computing Machinery, 2022, pp. 34–50.
2022 | Preprint | IST-REx-ID: 11336 |

Tissue-wide genetic and cellular landscape shapes the execution of sequential PRC2 functions in neural stem cell lineage progression
N. Amberg, F. Pauler, C. Streicher, S. Hippenmeyer, BioRxiv (n.d.).
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N. Amberg, F. Pauler, C. Streicher, S. Hippenmeyer, BioRxiv (n.d.).
2022 | Journal Article | IST-REx-ID: 11337 |

Entanglement and precession in two-dimensional dynamical quantum phase transitions
S. De Nicola, A. Michailidis, M. Serbyn, Physical Review B 105 (2022).
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S. De Nicola, A. Michailidis, M. Serbyn, Physical Review B 105 (2022).
2022 | Journal Article | IST-REx-ID: 11339 |

Nutrient and salt depletion synergistically boosts glucose metabolism in individual Escherichia coli cells
G. Glover, M. Voliotis, U. Łapińska, B.M. Invergo, D. Soanes, P. O’Neill, K. Moore, N. Nikolic, P. Petrov, D.S. Milner, S. Roy, K. Heesom, T.A. Richards, K. Tsaneva-Atanasova, S. Pagliara, Communications Biology 5 (2022).
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G. Glover, M. Voliotis, U. Łapińska, B.M. Invergo, D. Soanes, P. O’Neill, K. Moore, N. Nikolic, P. Petrov, D.S. Milner, S. Roy, K. Heesom, T.A. Richards, K. Tsaneva-Atanasova, S. Pagliara, Communications Biology 5 (2022).
2022 | Journal Article | IST-REx-ID: 11340 |

Like-charge attraction at the nanoscale: Ground-state correlations and water destructuring
I. Palaia, A. Goyal, E. Del Gado, L. Šamaj, E. Trizac, Journal of Physical Chemistry B 126 (2022) 3143–3149.
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I. Palaia, A. Goyal, E. Del Gado, L. Šamaj, E. Trizac, Journal of Physical Chemistry B 126 (2022) 3143–3149.
2022 | Journal Article | IST-REx-ID: 11344 |

Chromosome-encoded IpaH ubiquitin ligases indicate non-human enteroinvasive Escherichia
N. Dranenko, M. Tutukina, M. Gelfand, F. Kondrashov, O. Bochkareva, Scientific Reports 12 (2022).
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N. Dranenko, M. Tutukina, M. Gelfand, F. Kondrashov, O. Bochkareva, Scientific Reports 12 (2022).
2022 | Journal Article | IST-REx-ID: 10284 |

Early queen infection shapes developmental dynamics and induces long-term disease protection in incipient ant colonies
B.E. Casillas Perez, C. Pull, F. Naiser, E. Naderlinger, J. Matas, S. Cremer, Ecology Letters 25 (2022) 89–100.
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B.E. Casillas Perez, C. Pull, F. Naiser, E. Naderlinger, J. Matas, S. Cremer, Ecology Letters 25 (2022) 89–100.
2022 | Journal Article | IST-REx-ID: 9311 |

Finite-memory strategies in POMDPs with long-run average objectives
K. Chatterjee, R.J. Saona Urmeneta, B. Ziliotto, Mathematics of Operations Research 47 (2022) 100–119.
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K. Chatterjee, R.J. Saona Urmeneta, B. Ziliotto, Mathematics of Operations Research 47 (2022) 100–119.
2022 | Journal Article | IST-REx-ID: 9977 |

Resurgence analysis of quantum invariants of Seifert fibered homology spheres
W. Mistegaard, J.E. Andersen, Journal of the London Mathematical Society 105 (2022) 709–764.
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W. Mistegaard, J.E. Andersen, Journal of the London Mathematical Society 105 (2022) 709–764.
2022 | Journal Article | IST-REx-ID: 11353 |

Dissipative quantum feedback in measurements using a parametrically coupled microcavity
L. Qiu, G. Huang, I. Shomroni, J. Pan, P. Seidler, T.J. Kippenberg, PRX Quantum 3 (2022).
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L. Qiu, G. Huang, I. Shomroni, J. Pan, P. Seidler, T.J. Kippenberg, PRX Quantum 3 (2022).
2022 | Conference Paper | IST-REx-ID: 11355 |

Information-flow Interfaces
E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Fundamental Approaches to Software Engineering, Springer Nature, 2022, pp. 3–22.
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E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Fundamental Approaches to Software Engineering, Springer Nature, 2022, pp. 3–22.
2022 | Journal Article | IST-REx-ID: 11354 |

The Dirichlet–Ferguson diffusion on the space of probability measures over a closed Riemannian manifold
L. Dello Schiavo, Annals of Probability 50 (2022) 591–648.
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L. Dello Schiavo, Annals of Probability 50 (2022) 591–648.
2022 | Research Data | IST-REx-ID: 10934 |

In vitro reconstitution of Escherichia coli divisome activation
P. Radler, (2022).
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P. Radler, (2022).
2022 | Journal Article | IST-REx-ID: 11373 |

In vitro reconstitution of Escherichia coli divisome activation
P. Radler, N.S. Baranova, P.R. Dos Santos Caldas, C.M. Sommer, M.D. Lopez Pelegrin, D. Michalik, M. Loose, Nature Communications 13 (2022).
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P. Radler, N.S. Baranova, P.R. Dos Santos Caldas, C.M. Sommer, M.D. Lopez Pelegrin, D. Michalik, M. Loose, Nature Communications 13 (2022).
2022 | Journal Article | IST-REx-ID: 11379 |

Spontaneous gully-polarized quantum hall states in ABA trilayer graphene
F. Winterer, A.M. Seiler, A. Ghazaryan, F.R. Geisenhof, K. Watanabe, T. Taniguchi, M. Serbyn, R.T. Weitz, Nano Letters 22 (2022) 3317–3322.
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F. Winterer, A.M. Seiler, A. Ghazaryan, F.R. Geisenhof, K. Watanabe, T. Taniguchi, M. Serbyn, R.T. Weitz, Nano Letters 22 (2022) 3317–3322.
2022 | Journal Article | IST-REx-ID: 10652 |

Constraints on probing quantum coherence to infer gravitational entanglement
O. Hosten, Physical Review Research 4 (2022).
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O. Hosten, Physical Review Research 4 (2022).
2022 | Journal Article | IST-REx-ID: 10042 |

Defect engineering in solution-processed polycrystalline SnSe leads to high thermoelectric performance
Y. Liu, M. Calcabrini, Y. Yu, S. Lee, C. Chang, J. David, T. Ghosh, M.C. Spadaro, C. Xie, O. Cojocaru-Mirédin, J. Arbiol, M. Ibáñez, ACS Nano 16 (2022) 78–88.
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Y. Liu, M. Calcabrini, Y. Yu, S. Lee, C. Chang, J. David, T. Ghosh, M.C. Spadaro, C. Xie, O. Cojocaru-Mirédin, J. Arbiol, M. Ibáñez, ACS Nano 16 (2022) 78–88.
2022 | Journal Article | IST-REx-ID: 9364 |

On the size of the maximum of incomplete Kloosterman sums
D. Bonolis, Mathematical Proceedings of the Cambridge Philosophical Society 172 (2022) 563–590.
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| arXiv
D. Bonolis, Mathematical Proceedings of the Cambridge Philosophical Society 172 (2022) 563–590.
2022 | Thesis | IST-REx-ID: 11393
Contextual fear learning induced changes in AMPA receptor subtypes along the proximodistal axis in dorsal hippocampus
M. Jevtic, Contextual Fear Learning Induced Changes in AMPA Receptor Subtypes along the Proximodistal Axis in Dorsal Hippocampus, ISTA, 2022.
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M. Jevtic, Contextual Fear Learning Induced Changes in AMPA Receptor Subtypes along the Proximodistal Axis in Dorsal Hippocampus, ISTA, 2022.
2022 | Preprint | IST-REx-ID: 11366
Revisiting the adversarial robustness-accuracy tradeoff in robot learning
M. Lechner, A. Amini, D. Rus, T.A. Henzinger, ArXiv (n.d.).
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| arXiv
M. Lechner, A. Amini, D. Rus, T.A. Henzinger, ArXiv (n.d.).
2022 | Journal Article | IST-REx-ID: 11401 |

Unidentified major p-type source in SnSe: Multivacancies
V.Q. Nguyen, T.L. Trinh, C. Chang, L.D. Zhao, T.H. Nguyen, V.T. Duong, A.T. Duong, J.H. Park, S. Park, J. Kim, S. Cho, NPG Asia Materials 14 (2022).
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V.Q. Nguyen, T.L. Trinh, C. Chang, L.D. Zhao, T.H. Nguyen, V.T. Duong, A.T. Duong, J.H. Park, S. Park, J. Kim, S. Cho, NPG Asia Materials 14 (2022).
2022 | Journal Article | IST-REx-ID: 11400 |

Controlling cluster size in 2D phase-separating binary mixtures with specific interactions
I. Palaia, A. Šarić, The Journal of Chemical Physics 156 (2022).
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I. Palaia, A. Šarić, The Journal of Chemical Physics 156 (2022).
2022 | Journal Article | IST-REx-ID: 11402 |

Graph planning with expected finite horizon
K. Chatterjee, L. Doyen, Journal of Computer and System Sciences 129 (2022) 1–21.
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K. Chatterjee, L. Doyen, Journal of Computer and System Sciences 129 (2022) 1–21.
2022 | Thesis | IST-REx-ID: 11362 |

Learning verifiable representations
M. Lechner, Learning Verifiable Representations, ISTA, 2022.
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| DOI
M. Lechner, Learning Verifiable Representations, ISTA, 2022.
2022 | Journal Article | IST-REx-ID: 11420 |

Mean-field analysis of piecewise linear solutions for wide ReLU networks
A. Shevchenko, V. Kungurtsev, M. Mondelli, Journal of Machine Learning Research 23 (2022) 1–55.
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| arXiv
A. Shevchenko, V. Kungurtsev, M. Mondelli, Journal of Machine Learning Research 23 (2022) 1–55.
2022 | Journal Article | IST-REx-ID: 11419 |

Microtubule assembly by tau impairs endocytosis and neurotransmission via dynamin sequestration in Alzheimer's disease synapse model
T. Hori, K. Eguchi, H.Y. Wang, T. Miyasaka, L. Guillaud, Z. Taoufiq, S. Mahapatra, H. Yamada, K. Takei, T. Takahashi, ELife 11 (2022).
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T. Hori, K. Eguchi, H.Y. Wang, T. Miyasaka, L. Guillaud, Z. Taoufiq, S. Mahapatra, H. Yamada, K. Takei, T. Takahashi, ELife 11 (2022).
2022 | Thesis | IST-REx-ID: 11388
The genetic basis of complex traits studied via analysis of evolve and resequence experiments
S. Belohlavy, The Genetic Basis of Complex Traits Studied via Analysis of Evolve and Resequence Experiments, ISTA, 2022.
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S. Belohlavy, The Genetic Basis of Complex Traits Studied via Analysis of Evolve and Resequence Experiments, ISTA, 2022.
2022 | Journal Article | IST-REx-ID: 11418 |

Normal fluctuation in quantum ergodicity for Wigner matrices
G. Cipolloni, L. Erdös, D.J. Schröder, Annals of Probability 50 (2022) 984–1012.
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G. Cipolloni, L. Erdös, D.J. Schröder, Annals of Probability 50 (2022) 984–1012.
2022 | Journal Article | IST-REx-ID: 9955
Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum
R. Reyes‐Pinto, J.L. Ferrán, T.A. Vega Zuniga, C. González‐Cabrera, H. Luksch, J. Mpodozis, L. Puelles, G.J. Marín, Journal of Comparative Neurology 530 (2022) 553–573.
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| PubMed | Europe PMC
R. Reyes‐Pinto, J.L. Ferrán, T.A. Vega Zuniga, C. González‐Cabrera, H. Luksch, J. Mpodozis, L. Puelles, G.J. Marín, Journal of Comparative Neurology 530 (2022) 553–573.
2022 | Book (Editor) | IST-REx-ID: 11429
Web and Wireless Geographical Information Systems
F. Karimipour, S. Storandt, eds., Web and Wireless Geographical Information Systems, 1st ed., Springer Nature, Cham, 2022.
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| DOI
F. Karimipour, S. Storandt, eds., Web and Wireless Geographical Information Systems, 1st ed., Springer Nature, Cham, 2022.
2022 | Journal Article | IST-REx-ID: 10182
The assembly, regulation and function of the mitochondrial respiratory chain
I. Vercellino, L.A. Sazanov, Nature Reviews Molecular Cell Biology 23 (2022) 141–161.
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| DOI
| PubMed | Europe PMC
I. Vercellino, L.A. Sazanov, Nature Reviews Molecular Cell Biology 23 (2022) 141–161.
2022 | Journal Article | IST-REx-ID: 10208
A context-aware dimension reduction framework for trajectory and health signal analyses
S. Goudarzi, M. Sharif, F. Karimipour, Journal of Ambient Intelligence and Humanized Computing 13 (2022) 2621–2635.
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S. Goudarzi, M. Sharif, F. Karimipour, Journal of Ambient Intelligence and Humanized Computing 13 (2022) 2621–2635.
2022 | Journal Article | IST-REx-ID: 10413
Generalized quasi-metric semilattices
D. Dikranjan, A. Giordano Bruno, H.P. Künzi, N. Zava, D. Toller, Topology and Its Applications 309 (2022).
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| DOI
D. Dikranjan, A. Giordano Bruno, H.P. Künzi, N. Zava, D. Toller, Topology and Its Applications 309 (2022).
2022 | Journal Article | IST-REx-ID: 10587
Inkjet printing of epitaxially connected nanocrystal superlattices
D. Balazs, N.D. Erkan, M. Quien, T. Hanrath, Nano Research 15 (2022) 4536–4543.
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| DOI
D. Balazs, N.D. Erkan, M. Quien, T. Hanrath, Nano Research 15 (2022) 4536–4543.
2022 | Journal Article | IST-REx-ID: 11417 |

Emerging qubit systems: Guest editorial
A.J. Sigillito, J.P. Covey, J.M. Fink, K. Petersson, S. Preble, Applied Physics Letters 120 (2022).
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A.J. Sigillito, J.P. Covey, J.M. Fink, K. Petersson, S. Preble, Applied Physics Letters 120 (2022).
2022 | Conference Paper | IST-REx-ID: 11428 |

A cautionary tale: Burning the medial axis is unstable
E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
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E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
2022 | Journal Article | IST-REx-ID: 10922 |

Worst-case rigidity analysis and optimization for assemblies with mechanical joints
Z. Liu, J. Hu, H. Xu, P. Song, R. Zhang, B. Bickel, C.-W. Fu, Computer Graphics Forum 41 (2022) 507–519.
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Z. Liu, J. Hu, H. Xu, P. Song, R. Zhang, B. Bickel, C.-W. Fu, Computer Graphics Forum 41 (2022) 507–519.
2022 | Journal Article | IST-REx-ID: 11432 |

Coupling 3D liquid simulation with 2D wave propagation for large scale water surface animation using the equivalent sources method
C. Schreck, C. Wojtan, Computer Graphics Forum 41 (2022) 343–353.
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C. Schreck, C. Wojtan, Computer Graphics Forum 41 (2022) 343–353.
2022 | Journal Article | IST-REx-ID: 11435 |

A quantitative Helly-type theorem: Containment in a homothet
G. Ivanov, M. Naszodi, SIAM Journal on Discrete Mathematics 36 (2022) 951–957.
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| arXiv
G. Ivanov, M. Naszodi, SIAM Journal on Discrete Mathematics 36 (2022) 951–957.
2022 | Journal Article | IST-REx-ID: 10335 |

Even maps, the Colin de Verdière number and representations of graphs
V. Kaluza, M. Tancer, Combinatorica (2022).
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| DOI
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| arXiv
V. Kaluza, M. Tancer, Combinatorica (2022).
2022 | Journal Article | IST-REx-ID: 11434
Role of the eastern equatorial Indian Ocean warming in the Indian summer monsoon rainfall trend
B.B. GOSWAMI, Climate Dynamics (2022).
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| DOI
B.B. GOSWAMI, Climate Dynamics (2022).