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3934 Publications

2022 | Journal Article | IST-REx-ID: 10927 | OA
PaReBrick: PArallel REarrangements and BReaks identification toolkit
A. Zabelkin, Y. Yakovleva, O. Bochkareva, N. Alexeev, Bioinformatics 38 (2022) 357–363.
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2022 | Journal Article | IST-REx-ID: 10939 | OA
Parameter inference for stochastic biochemical models from perturbation experiments parallelised at the single cell level
A. Davidović, R.P. Chait, G. Batt, J. Ruess, PLoS Computational Biology 18 (2022).
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2022 | Journal Article | IST-REx-ID: 10940 | OA
Magnetic field resilience of three-dimensional transmons with thin-film Al/AlOx/Al Josephson junctions approaching 1 T
J. Krause, C. Dickel, E. Vaal, M. Vielmetter, J. Feng, R. Bounds, G. Catelani, J.M. Fink, Y. Ando, Physical Review Applied 17 (2022).
View | DOI | Download Preprint (ext.) | arXiv
 
2022 | Journal Article | IST-REx-ID: 10945 | OA
pH-dependent coloring of combination effect pigments with anthocyanins from Brassica oleracea var. capitata F. rubra
M.O. Çoruh, G. Gündüz, Ü. Çolak, B. Maviş, Colorants 1 (2022) 149–164.
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2022 | Thesis | IST-REx-ID: 11128 | OA
Genetic basis of flower colour as a model for adaptive evolution
L. Matejovicova, Genetic Basis of Flower Colour as a Model for Adaptive Evolution, ISTA, 2022.
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2022 | Journal Article | IST-REx-ID: 11135 | OA
On the operator norm of a Hermitian random matrix with correlated entries
J. Reker, Random Matrices: Theory and Applications (2022).
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2022 | Journal Article | IST-REx-ID: 11142
Enhanced thermoelectric performance in SnTe due to the energy filtering effect introduced by Bi2O3
T. Hong, C. Guo, D. Wang, B. Qin, C. Chang, X. Gao, L.D. Zhao, Materials Today Energy 25 (2022).
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2022 | Journal Article | IST-REx-ID: 11143 | OA
Developmentally regulated impairment of parvalbumin interneuron synaptic transmission in an experimental model of Dravet syndrome
K. Kaneko, C. Currin, K.M. Goff, E.R. Wengert, A. Somarowthu, T.P. Vogels, E.M. Goldberg, Cell Reports 38 (2022).
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2022 | Journal Article | IST-REx-ID: 11144
High thermoelectric performance realized through manipulating layered phonon-electron decoupling
L. Su, D. Wang, S. Wang, B. Qin, Y. Wang, Y. Qin, Y. Jin, C. Chang, L.D. Zhao, Science 375 (2022) 1385–1389.
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2022 | Journal Article | IST-REx-ID: 11160 | OA
CHD8 haploinsufficiency links autism to transient alterations in excitatory and inhibitory trajectories
C.E. Villa, C. Cheroni, C. Dotter, A. López-Tóbon, B. Oliveira, R. Sacco, A.Ç. Yahya, J. Morandell, M. Gabriele, M. Tavakoli, J. Lyudchik, C.M. Sommer, M. Gabitto, J.G. Danzl, G. Testa, G. Novarino, Cell Reports 39 (2022).
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2022 | Conference Paper | IST-REx-ID: 11180 | OA
Multi-queues can be state-of-the-art priority schedulers
A. Postnikova, N. Koval, G. Nadiradze, D.-A. Alistarh, in:, Proceedings of the 27th ACM SIGPLAN Symposium on Principles and Practice of Parallel Programming, Association for Computing Machinery, 2022, pp. 353–367.
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2022 | Journal Article | IST-REx-ID: 11182 | OA
Quantifying the probing and selection of microenvironmental pores by motile immune cells
J. Kroll, M.J.A. Ruiz-Fernandez, M.B. Braun, J. Merrin, J. Renkawitz, Current Protocols 2 (2022).
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2022 | Conference Paper | IST-REx-ID: 11183 | OA
Beyond distributed subgraph detection: Induced subgraphs, multicolored problems and graph parameters
A. Nikabadi, J. Korhonen, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
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2022 | Conference Paper | IST-REx-ID: 11184 | OA
Fast graphical population protocols
D.-A. Alistarh, R. Gelashvili, J. Rybicki, in:, Q. Bramas, V. Gramoli, A. Milani (Eds.), 25th International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
View | Files available | DOI | arXiv
 
2022 | Conference Paper | IST-REx-ID: 11185 | OA
Approximating the bundled crossing number
A.M. Arroyo Guevara, S. Felsner, in:, WALCOM 2022: Algorithms and Computation, Springer Nature, 2022, pp. 383–395.
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2022 | Journal Article | IST-REx-ID: 11186 | OA
Large deviations in random latin squares
M.A. Kwan, A. Sah, M. Sawhney, Bulletin of the London Mathematical Society (2022).
View | DOI | Download Published Version (ext.) | arXiv
 
2022 | Journal Article | IST-REx-ID: 11187 | OA
Unlocking capacities of genomics for the COVID-19 response and future pandemics
Knyazev S, Chhugani K, Sarwal V, Ayyala R, Singh H, Karthikeyan S, Deshpande D, Baykal PI, Comarova Z, Lu A, Porozov Y, Vasylyeva TI, Wertheim JO, Tierney BT, Chiu CY, Sun R, Wu A, Abedalthagafi MS, Pak VM, Nagaraj SH, Smith AL, Skums P, Pasaniuc B, Komissarov A, Mason CE, Bortz E, Lemey P, Kondrashov F, Beerenwinkel N, Lam TTY, Wu NC, Zelikovsky A, Knight R, Crandall KA, Mangul S. 2022. Unlocking capacities of genomics for the COVID-19 response and future pandemics. Nature Methods. 19(4), 374–380.
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2022 | Thesis | IST-REx-ID: 11193
Transcriptional regulation by Dfos and BMP-signaling support tissue invasion of Drosophila immune cells
S. Wachner, Transcriptional Regulation by Dfos and BMP-Signaling Support Tissue Invasion of Drosophila Immune Cells, ISTA, 2022.
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2022 | Thesis | IST-REx-ID: 11196
Nanoarchitecture of hippocampal mossy fiber-CA3 pyramidal neuron synapses
O. Kim, Nanoarchitecture of Hippocampal Mossy Fiber-CA3 Pyramidal Neuron Synapses, ISTA, 2022.
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2022 | Conference Paper | IST-REx-ID: 11331 | OA
Narwhal and Tusk: A DAG-based mempool and efficient BFT consensus
G. Danezis, E. Kokoris Kogias, A. Sonnino, A. Spiegelman, in:, Proceedings of the 17th European Conference on Computer Systems, Association for Computing Machinery, 2022, pp. 34–50.
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2022 | Preprint | IST-REx-ID: 11336 | OA View | DOI | Download Preprint (ext.)
 
2022 | Journal Article | IST-REx-ID: 11337 | OA
Entanglement and precession in two-dimensional dynamical quantum phase transitions
S. De Nicola, A. Michailidis, M. Serbyn, Physical Review B 105 (2022).
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2022 | Journal Article | IST-REx-ID: 11339 | OA
Nutrient and salt depletion synergistically boosts glucose metabolism in individual Escherichia coli cells
G. Glover, M. Voliotis, U. Łapińska, B.M. Invergo, D. Soanes, P. O’Neill, K. Moore, N. Nikolic, P. Petrov, D.S. Milner, S. Roy, K. Heesom, T.A. Richards, K. Tsaneva-Atanasova, S. Pagliara, Communications Biology 5 (2022).
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2022 | Journal Article | IST-REx-ID: 11340 | OA
Like-charge attraction at the nanoscale: Ground-state correlations and water destructuring
I. Palaia, A. Goyal, E. Del Gado, L. Šamaj, E. Trizac, Journal of Physical Chemistry B 126 (2022) 3143–3149.
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2022 | Journal Article | IST-REx-ID: 11344 | OA
Chromosome-encoded IpaH ubiquitin ligases indicate non-human enteroinvasive Escherichia
N. Dranenko, M. Tutukina, M. Gelfand, F. Kondrashov, O. Bochkareva, Scientific Reports 12 (2022).
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2022 | Journal Article | IST-REx-ID: 10284 | OA
Early queen infection shapes developmental dynamics and induces long-term disease protection in incipient ant colonies
B.E. Casillas Perez, C. Pull, F. Naiser, E. Naderlinger, J. Matas, S. Cremer, Ecology Letters 25 (2022) 89–100.
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2022 | Journal Article | IST-REx-ID: 9311 | OA
Finite-memory strategies in POMDPs with long-run average objectives
K. Chatterjee, R.J. Saona Urmeneta, B. Ziliotto, Mathematics of Operations Research 47 (2022) 100–119.
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2022 | Journal Article | IST-REx-ID: 9977 | OA
Resurgence analysis of quantum invariants of Seifert fibered homology spheres
W. Mistegaard, J.E. Andersen, Journal of the London Mathematical Society 105 (2022) 709–764.
View | Files available | DOI | arXiv
 
2022 | Journal Article | IST-REx-ID: 11353 | OA
Dissipative quantum feedback in measurements using a parametrically coupled microcavity
L. Qiu, G. Huang, I. Shomroni, J. Pan, P. Seidler, T.J. Kippenberg, PRX Quantum 3 (2022).
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2022 | Conference Paper | IST-REx-ID: 11355 | OA
Information-flow Interfaces
E. Bartocci, T. Ferrere, T.A. Henzinger, D. Nickovic, A.O. Da Costa, in:, Fundamental Approaches to Software Engineering, Springer Nature, 2022, pp. 3–22.
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2022 | Journal Article | IST-REx-ID: 11354 | OA View | DOI | Download Preprint (ext.) | arXiv
 
2022 | Research Data | IST-REx-ID: 10934 | OA View | Files available | DOI
 
2022 | Journal Article | IST-REx-ID: 11373 | OA
In vitro reconstitution of Escherichia coli divisome activation
P. Radler, N.S. Baranova, P.R. Dos Santos Caldas, C.M. Sommer, M.D. Lopez Pelegrin, D. Michalik, M. Loose, Nature Communications 13 (2022).
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2022 | Journal Article | IST-REx-ID: 11379 | OA
Spontaneous gully-polarized quantum hall states in ABA trilayer graphene
F. Winterer, A.M. Seiler, A. Ghazaryan, F.R. Geisenhof, K. Watanabe, T. Taniguchi, M. Serbyn, R.T. Weitz, Nano Letters 22 (2022) 3317–3322.
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2022 | Journal Article | IST-REx-ID: 10652 | OA View | Files available | DOI
 
2022 | Journal Article | IST-REx-ID: 10042 | OA
Defect engineering in solution-processed polycrystalline SnSe leads to high thermoelectric performance
Y. Liu, M. Calcabrini, Y. Yu, S. Lee, C. Chang, J. David, T. Ghosh, M.C. Spadaro, C. Xie, O. Cojocaru-Mirédin, J. Arbiol, M. Ibáñez, ACS Nano 16 (2022) 78–88.
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2022 | Journal Article | IST-REx-ID: 9364 | OA
On the size of the maximum of incomplete Kloosterman sums
D. Bonolis, Mathematical Proceedings of the Cambridge Philosophical Society 172 (2022) 563–590.
View | Files available | DOI | arXiv
 
2022 | Thesis | IST-REx-ID: 11393
Contextual fear learning induced changes in AMPA receptor subtypes along the proximodistal axis in dorsal hippocampus
M. Jevtic, Contextual Fear Learning Induced Changes in AMPA Receptor Subtypes along the Proximodistal Axis in Dorsal Hippocampus, ISTA, 2022.
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2022 | Preprint | IST-REx-ID: 11366
Revisiting the adversarial robustness-accuracy tradeoff in robot learning
M. Lechner, A. Amini, D. Rus, T.A. Henzinger, ArXiv (n.d.).
View | Files available | DOI | arXiv
 
2022 | Journal Article | IST-REx-ID: 11401 | OA
Unidentified major p-type source in SnSe: Multivacancies
V.Q. Nguyen, T.L. Trinh, C. Chang, L.D. Zhao, T.H. Nguyen, V.T. Duong, A.T. Duong, J.H. Park, S. Park, J. Kim, S. Cho, NPG Asia Materials 14 (2022).
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2022 | Journal Article | IST-REx-ID: 11400 | OA
Controlling cluster size in 2D phase-separating binary mixtures with specific interactions
I. Palaia, A. Šarić, The Journal of Chemical Physics 156 (2022).
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2022 | Journal Article | IST-REx-ID: 11402 | OA
Graph planning with expected finite horizon
K. Chatterjee, L. Doyen, Journal of Computer and System Sciences 129 (2022) 1–21.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2022 | Thesis | IST-REx-ID: 11362 | OA
Learning verifiable representations
M. Lechner, Learning Verifiable Representations, ISTA, 2022.
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2022 | Journal Article | IST-REx-ID: 11420 | OA
Mean-field analysis of piecewise linear solutions for wide ReLU networks
A. Shevchenko, V. Kungurtsev, M. Mondelli, Journal of Machine Learning Research 23 (2022) 1–55.
View | Files available | arXiv
 
2022 | Journal Article | IST-REx-ID: 11419 | OA
Microtubule assembly by tau impairs endocytosis and neurotransmission via dynamin sequestration in Alzheimer's disease synapse model
T. Hori, K. Eguchi, H.Y. Wang, T. Miyasaka, L. Guillaud, Z. Taoufiq, S. Mahapatra, H. Yamada, K. Takei, T. Takahashi, ELife 11 (2022).
View | Files available | DOI | PubMed | Europe PMC
 
2022 | Thesis | IST-REx-ID: 11388
The genetic basis of complex traits studied via analysis of evolve and resequence experiments
S. Belohlavy, The Genetic Basis of Complex Traits Studied via Analysis of Evolve and Resequence Experiments, ISTA, 2022.
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2022 | Journal Article | IST-REx-ID: 11418 | OA
Normal fluctuation in quantum ergodicity for Wigner matrices
G. Cipolloni, L. Erdös, D.J. Schröder, Annals of Probability 50 (2022) 984–1012.
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2022 | Journal Article | IST-REx-ID: 9955
Change in the neurochemical signature and morphological development of the parvocellular isthmic projection to the avian tectum
R. Reyes‐Pinto, J.L. Ferrán, T.A. Vega Zuniga, C. González‐Cabrera, H. Luksch, J. Mpodozis, L. Puelles, G.J. Marín, Journal of Comparative Neurology 530 (2022) 553–573.
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2022 | Book (Editor) | IST-REx-ID: 11429
Web and Wireless Geographical Information Systems
F. Karimipour, S. Storandt, eds., Web and Wireless Geographical Information Systems, 1st ed., Springer Nature, Cham, 2022.
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2022 | Journal Article | IST-REx-ID: 10182
The assembly, regulation and function of the mitochondrial respiratory chain
I. Vercellino, L.A. Sazanov, Nature Reviews Molecular Cell Biology 23 (2022) 141–161.
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