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5046 Publications

2016 | Journal Article | IST-REx-ID: 1183 | OA
Impaired amino acid transport at the blood brain barrier is a cause of autism spectrum disorder
Tarlungeanu D-C, Deliu E, Dotter C, Kara M, Janiesch P, Scalise M, Galluccio M, Tesulov M, Morelli E, Sönmez F, Bilgüvar K, Ohgaki R, Kanai Y, Johansen A, Esharif S, Ben Omran T, Topcu M, Schlessinger A, Indiveri C, Duncan K, Caglayan A, Günel M, Gleeson J, Novarino G. 2016. Impaired amino acid transport at the blood brain barrier is a cause of autism spectrum disorder. Cell. 167(6), 1481–1494.
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2016 | Journal Article | IST-REx-ID: 1321 | OA
Diversified actin protrusions promote environmental exploration but are dispensable for locomotion of leukocytes
A.F. Leithner, A. Eichner, J. Müller, A. Reversat, M. Brown, J. Schwarz, J. Merrin, D. De Gorter, F.K. Schur, J. Bayerl, I. de Vries, S. Wieser, R. Hauschild, F. Lai, M. Moser, D. Kerjaschki, K. Rottner, V. Small, T. Stradal, M.K. Sixt, Nature Cell Biology 18 (2016) 1253–1259.
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2016 | Journal Article | IST-REx-ID: 1100 | OA
Optogenetic control of nodal signaling reveals a temporal pattern of nodal signaling regulating cell fate specification during gastrulation
K. Sako, S. Pradhan, V. Barone, Á. Inglés Prieto, P. Mueller, V. Ruprecht, D. Capek, S. Galande, H.L. Janovjak, C.-P.J. Heisenberg, Cell Reports 16 (2016) 866–877.
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2016 | Conference Paper | IST-REx-ID: 1437 | OA
Algorithms for algebraic path properties in concurrent systems of constant treewidth components
K. Chatterjee, A.K. Goharshady, R. Ibsen-Jensen, A. Pavlogiannis, in:, ACM, 2016, pp. 733–747.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2016 | Conference Paper | IST-REx-ID: 1386 | OA
Termination analysis of probabilistic programs through Positivstellensatz's
K. Chatterjee, H. Fu, A.K. Goharshady, in:, Springer, 2016, pp. 3–22.
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2015 | Journal Article | IST-REx-ID: 10794 | OA
Bayesian inference for stochastic individual-based models of ecological systems: a pest control simulation study
F. Parise, J. Lygeros, J. Ruess, Frontiers in Environmental Science 3 (2015).
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2015 | Conference Paper | IST-REx-ID: 10796
The value 1 problem under finite-memory strategies for concurrent mean-payoff games
K. Chatterjee, R. Ibsen-Jensen, in:, Proceedings of the Twenty-Sixth Annual ACM-SIAM Symposium on Discrete Algorithms, SIAM, 2015, pp. 1018–1029.
[Preprint] View | DOI | arXiv
 
2015 | Journal Article | IST-REx-ID: 1383 | OA
V-ATPase activity in the TGN/EE is required for exocytosis and recycling in Arabidopsis
L. Yu, S. Scholl, A. Doering, Z. Yi, N. Irani, S. Di Rubbo, L. Neumetzler, P. Krishnamoorthy, I. Van Houtte, E. Mylle, V. Bischoff, S. Vernhettes, J. Winne, J. Friml, Y. Stierhof, K. Schumacher, S. Persson, E. Russinova, Nature Plants 1 (2015).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2015 | Conference Paper | IST-REx-ID: 1425 | OA
Lifelong learning with non-i.i.d. tasks
A. Pentina, C. Lampert, in:, Neural Information Processing Systems, 2015, pp. 1540–1548.
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2015 | Conference Paper | IST-REx-ID: 1424 | OA
Statistical topological data analysis-A kernel perspective
R. Kwitt, S. Huber, M. Niethammer, W. Lin, U. Bauer, in:, Neural Information Processing Systems, 2015, pp. 3070–3078.
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2015 | Conference Paper | IST-REx-ID: 1430 | OA
First steps towards a runtime comparison of natural and artificial evolution
T. Paixao, D. Sudholt, J. Heredia, B. Trubenova, in:, Proceedings of the 2015 Annual Conference on Genetic and Evolutionary Computation, ACM, 2015, pp. 1455–1462.
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2015 | Conference Paper | IST-REx-ID: 1474 | OA
Policy privacy in cryptographic access control
A. Ferrara, G. Fuchsbauer, B. Liu, B. Warinschi, in:, IEEE, 2015, pp. 46–60.
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2015 | Conference Paper | IST-REx-ID: 1483 | OA
A stable multi-scale kernel for topological machine learning
J. Reininghaus, S. Huber, U. Bauer, R. Kwitt, in:, IEEE, 2015, pp. 4741–4748.
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2015 | Conference Paper | IST-REx-ID: 1498 | OA
The need for language support for fault-tolerant distributed systems
C. Dragoi, T.A. Henzinger, D. Zufferey, 32 (2015) 90–102.
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2015 | Journal Article | IST-REx-ID: 1497 | OA
Allelome.PRO, a pipeline to define allele-specific genomic features from high-throughput sequencing data
D. Andergassen, C. Dotter, T. Kulinski, P. Guenzl, P. Bammer, D. Barlow, F. Pauler, Q. Hudson, Nucleic Acids Research 43 (2015).
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2015 | Conference Paper | IST-REx-ID: 1499 | OA
Polynomial time decidability of weighted synchronization under partial observability
J. Kretinsky, K. Larsen, S. Laursen, J. Srba, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 142–154.
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2015 | Conference Paper | IST-REx-ID: 1495 | OA
Relaxed disk packing
H. Edelsbrunner, M. Iglesias Ham, V. Kurlin, in:, Proceedings of the 27th Canadian Conference on Computational Geometry, Queen’s University, 2015, pp. 128–135.
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2015 | Conference Paper | IST-REx-ID: 1510 | OA
On computability and triviality of well groups
P. Franek, M. Krcál, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2015, pp. 842–856.
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2015 | Journal Article | IST-REx-ID: 1505 | OA
Universality for the largest eigenvalue of sample covariance matrices with general population
Z. Bao, G. Pan, W. Zhou, Annals of Statistics 43 (2015) 382–421.
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2015 | Journal Article | IST-REx-ID: 1508 | OA
Gap universality of generalized Wigner and β ensembles
L. Erdös, H. Yau, Journal of the European Mathematical Society 17 (2015) 1927–2036.
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2015 | Journal Article | IST-REx-ID: 1506 | OA
The logarithmic law of random determinant
Z. Bao, G. Pan, W. Zhou, Bernoulli 21 (2015) 1600–1628.
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2015 | Journal Article | IST-REx-ID: 1513 | OA
The X chromosome of hemipteran insects: Conservation, dosage compensation and sex-biased expression
A. Pal, B. Vicoso, Genome Biology and Evolution 7 (2015) 3259–3268.
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2015 | Journal Article | IST-REx-ID: 1517 | OA
From large deviations to Wasserstein gradient flows in multiple dimensions
M. Erbar, J. Maas, M. Renger, Electronic Communications in Probability 20 (2015).
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2015 | Journal Article | IST-REx-ID: 1519 | OA
The interpretation of selection coefficients
N.H. Barton, M. Servedio, Evolution 69 (2015) 1101–1112.
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2015 | Journal Article | IST-REx-ID: 1525 | OA
Arbeitsgruppe „Nationale Strategie“ des Open Access Network Austria OANA
B. Bauer, G. Blechl, C. Bock, P. Danowski, A. Ferus, A. Graschopf, T. König, K. Mayer, F. Reckling, K. Rieck, P. Seitz, H. Stöger, E. Welzig, VÖB Mitteilungen 68 (2015) 580–607.
[Published Version] View | Files available | DOI
 
2015 | Conference Paper | IST-REx-ID: 1520
Computational design of walking automata
G. Bharaj, S. Coros, B. Thomaszewski, J. Tompkin, B. Bickel, H. Pfister, in:, ACM, 2015, pp. 93–100.
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2015 | Journal Article | IST-REx-ID: 1532
Auxin-modulated root growth inhibition in Arabidopsis thaliana seedlings with ammonium as the sole nitrogen source
H. Yang, J. Von Der Fecht Bartenbach, J. Friml, J. Lohmann, B. Neuhäuser, U. Ludewig, Functional Plant Biology 42 (2015) 239–251.
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2015 | Book Chapter | IST-REx-ID: 1531
Visualizing symmetric indefinite 2D tensor fields using The Heat Kernel Signature
V. Zobel, J. Reininghaus, I. Hotz, in:, I. Hotz, T. Schultz (Eds.), Visualization and Processing of Higher Order Descriptors for Multi-Valued Data, 1st ed., Springer, 2015, pp. 257–267.
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2015 | Journal Article | IST-REx-ID: 1530
Impact of the cell division cycle on gene circuits
V. Bierbaum, S. Klumpp, Physical Biology 12 (2015).
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2015 | Journal Article | IST-REx-ID: 1539 | OA
Minimal moment equations for stochastic models of biochemical reaction networks with partially finite state space
J. Ruess, Journal of Chemical Physics 143 (2015).
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2015 | Journal Article | IST-REx-ID: 1534 | OA
Transcriptional regulation of PIN genes by FOUR LIPS and MYB88 during Arabidopsis root gravitropism
H. Wang, K. Yang, J. Zou, L. Zhu, Z. Xie, M. Morita, M. Tasaka, J. Friml, E. Grotewold, T. Beeckman, S. Vanneste, F. Sack, J. Le, Nature Communications 6 (2015).
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2015 | Journal Article | IST-REx-ID: 1538 | OA
Iterative experiment design guides the characterization of a light-inducible gene expression circuit
J. Ruess, F. Parise, A. Milias Argeitis, M. Khammash, J. Lygeros, PNAS 112 (2015) 8148–8153.
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2015 | Journal Article | IST-REx-ID: 1535 | OA
Cav1.3 channels as key regulators of neuron-like firings and catecholamine release in chromaffin cells
D.H. Vandael, A. Marcantoni, E. Carbone, Current Molecular Pharmacology 8 (2015) 149–161.
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2015 | Journal Article | IST-REx-ID: 1536
Asymmetric localizations of the ABC transporter PaPDR1 trace paths of directional strigolactone transport
J. Sasse, S. Simon, C. Gübeli, G. Liu, X. Cheng, J. Friml, H. Bouwmeester, E. Martinoia, L. Borghi, Current Biology 25 (2015) 647–655.
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2015 | Journal Article | IST-REx-ID: 1533
Segmentation over detection via optimal sparse reconstructions
W. Xia, C. Domokos, J. Xiong, L. Cheong, S. Yan, IEEE Transactions on Circuits and Systems for Video Technology 25 (2015) 1295–1308.
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2015 | Journal Article | IST-REx-ID: 1542 | OA
Toward a unifying framework for evolutionary processes
T. Paixao, G. Badkobeh, N.H. Barton, D. Çörüş, D. Dang, T. Friedrich, P. Lehre, D. Sudholt, A. Sutton, B. Trubenova, Journal of Theoretical Biology 383 (2015) 28–43.
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2015 | Journal Article | IST-REx-ID: 1546 | OA
Nanoscale distribution of presynaptic Ca2+ channels and its impact on vesicular release during development
Y. Nakamura, H. Harada, N. Kamasawa, K. Matsui, J. Rothman, R. Shigemoto, R.A. Silver, D. Digregorio, T. Takahashi, Neuron 85 (2015) 145–158.
[Published Version] View | Files available | DOI
 
2015 | Conference Paper | IST-REx-ID: 1541
XSpeed: Accelerating reachability analysis on multi-core processors
R. Ray, A. Gurung, B. Das, E. Bartocci, S. Bogomolov, R. Grosu, 9434 (2015) 3–18.
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2015 | Journal Article | IST-REx-ID: 1543
A conserved core of programmed cell death indicator genes discriminates developmentally and environmentally induced programmed cell death in plants
Y. Olvera Carrillo, M. Van Bel, T. Van Hautegem, M. Fendrych, M. Huysmans, M. Šimášková, M. Van Durme, P. Buscaill, S. Rivas, N. Coll, F. Coppens, S. Maere, M. Nowack, Plant Physiology 169 (2015) 2684–2699.
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2015 | Book Chapter | IST-REx-ID: 1544 | OA
Using supported bilayers to study the spatiotemporal organization of membrane-bound proteins
P. Nguyen, C. Field, A. Groen, T. Mitchison, M. Loose, in:, Building a Cell from Its Components Parts, Academic Press, 2015, pp. 223–241.
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2015 | Journal Article | IST-REx-ID: 1540
The importance of localized auxin production for morphogenesis of reproductive organs and embryos in Arabidopsis
H. Robert, L. Crhák Khaitová, S. Mroue, E. Benková, Journal of Experimental Botany 66 (2015) 5029–5042.
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2015 | Journal Article | IST-REx-ID: 1551 | OA
Host–pathogen coevolution: The selective advantage of Bacillus thuringiensis virulence and its cry toxin genes
L. El Masri, A. Branca, A. Sheppard, A. Papkou, D. Laehnemann, P. Guenther, S. Prahl, M. Saebelfeld, J. Hollensteiner, H. Liesegang, E. Brzuszkiewicz, R. Daniel, N. Michiels, R. Schulte, J. Kurtz, P. Rosenstiel, A. Telschow, E. Bornberg Bauer, H. Schulenburg, PLoS Biology 13 (2015) 1–30.
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2015 | Book Chapter | IST-REx-ID: 1549 | OA
Flipping the photoswitch: Ion channels under light control
C. Mckenzie, I. Sanchez-Romero, H.L. Janovjak, in:, Novel Chemical Tools to Study Ion Channel Biology, Springer, 2015, pp. 101–117.
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2015 | Journal Article | IST-REx-ID: 1548 | OA
Infection of Tribolium castaneum with Bacillus thuringiensis: Quantification of bacterial replication within cadavers, transmission via cannibalism, and inhibition of spore germination
B. Milutinovic, C. Höfling, M. Futo, J. Scharsack, J. Kurtz, Applied and Environmental Microbiology 81 (2015) 8135–8144.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2015 | Journal Article | IST-REx-ID: 1553
Actin flows mediate a universal coupling between cell speed and cell persistence
P. Maiuri, J. Rupprecht, S. Wieser, V. Ruprecht, O. Bénichou, N. Carpi, M. Coppey, S. De Beco, N. Gov, C.-P.J. Heisenberg, C. Lage Crespo, F. Lautenschlaeger, M. Le Berre, A. Lennon Duménil, M. Raab, H. Thiam, M. Piel, M.K. Sixt, R. Voituriez, Cell 161 (2015) 374–386.
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2015 | Journal Article | IST-REx-ID: 1550 | OA
Clonally related forebrain interneurons disperse broadly across both functional areas and structural boundaries
C. Mayer, X. Jaglin, L. Cobbs, R. Bandler, C. Streicher, C. Cepko, S. Hippenmeyer, G. Fishell, Neuron 87 (2015) 989–998.
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2015 | Journal Article | IST-REx-ID: 1547 | OA
Resolution of unmixed bipartite graphs
F. Mohammadi, S. Moradi, Bulletin of the Korean Mathematical Society 52 (2015) 977–986.
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2015 | Journal Article | IST-REx-ID: 1556 | OA
The Arabidopsis thaliana elongator complex subunit 2 epigenetically affects root development
Y. Jia, H. Tian, H. Li, Q. Yu, L. Wang, J. Friml, Z. Ding, Journal of Experimental Botany 66 (2015) 4631–4642.
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2015 | Journal Article | IST-REx-ID: 1555 | OA
Rich bifurcation structure in a two patch vaccination model
D. Knipl, P. Pilarczyk, G. Röst, SIAM Journal on Applied Dynamical Systems 14 (2015) 980–1017.
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2015 | Journal Article | IST-REx-ID: 1558
The cyclophilin a DIAGEOTROPICA gene affects auxin transport in both root and shoot to control lateral root formation
M. Ivanchenko, J. Zhu, B. Wang, E. Medvecka, Y. Du, E. Azzarello, S. Mancuso, M. Megraw, S. Filichkin, J. Dubrovsky, J. Friml, M. Geisler, Development 142 (2015) 712–721.
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