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2941 Publications

2011 | Book Chapter | IST-REx-ID: 3335 | OA
R. Van De Weygaert et al., “Alpha, Betti and the Megaparsec Universe: On the topology of the Cosmic Web,” in Transactions on Computational Science XIV, vol. 6970, M. Gavrilova, K. Tan, and M. Mostafavi, Eds. Springer, 2011, pp. 60–101.
View | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3336
C. Chen, D. Freedman, and C. Lampert, “Enforcing topological constraints in random field image segmentation,” in CVPR: Computer Vision and Pattern Recognition, Colorado Springs, CO, USA, 2011, pp. 2089–2096.
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2011 | Conference Paper | IST-REx-ID: 3337
Z. Wang, C. Lampert, K. Mülling, B. Schölkopf, and J. Peters, “Learning anticipation policies for robot table tennis,” presented at the IROS: RSJ International Conference on Intelligent Robots and Systems, San Francisco, USA, 2011, pp. 332–337.
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2011 | Preprint | IST-REx-ID: 3338 | OA
K. Chatterjee, “Bounded rationality in concurrent parity games,” arXiv. ArXiv, pp. 1–51, 2011.
View | Files available | Download Preprint (ext.) | arXiv
 
2011 | Preprint | IST-REx-ID: 3339 | OA
K. Chatterjee, L. De Alfaro, and R. Pritam, “Magnifying lens abstraction for stochastic games with discounted and long-run average objectives,” arXiv. ArXiv, 2011.
View | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3342 | OA
K. Chatterjee, M. Henzinger, M. Joglekar, and S. Nisarg, “Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives,” presented at the CAV: Computer Aided Verification, Snowbird, USA, 2011, vol. 6806, pp. 260–276.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3343 | OA
K. Chatterjee and M. Henzinger, “Faster and dynamic algorithms for maximal end component decomposition and related graph problems in probabilistic verification,” presented at the SODA: Symposium on Discrete Algorithms, San Francisco, USA, 2011, pp. 1318–1336.
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2011 | Conference Paper | IST-REx-ID: 3344
K. Chatterjee, “Graph games with reachability objectives,” presented at the RP: Reachability Problems, Genoa, Italy, 2011, vol. 6945, pp. 1–1.
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2011 | Conference Paper | IST-REx-ID: 3345 | OA
K. Chatterjee and L. Doyen, “Energy and mean-payoff parity Markov Decision Processes,” presented at the MFCS: Mathematical Foundations of Computer Science, Warsaw, Poland, 2011, vol. 6907, pp. 206–218.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3346 | OA
T. Brázdil, V. Brožek, K. Chatterjee, V. Forejt, and A. Kučera, “Two views on multiple mean payoff objectives in Markov Decision Processes,” presented at the LICS: Logic in Computer Science, Toronto, Canada, 2011.
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2011 | Conference Paper | IST-REx-ID: 3347 | OA
K. Chatterjee and N. Fijalkow, “Finitary languages,” presented at the LATA: Language and Automata Theory and Applications, Tarragona, Spain, 2011, vol. 6638, pp. 216–226.
View | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3348 | OA
K. Chatterjee and V. Prabhu, “Synthesis of memory efficient real time controllers for safety objectives,” presented at the HSCC: Hybrid Systems - Computation and Control, Chicago, USA, 2011, pp. 221–230.
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2011 | Conference Paper | IST-REx-ID: 3349 | OA
K. Chatterjee and N. Fijalkow, “A reduction from parity games to simple stochastic games,” presented at the GandALF: Games, Automata, Logic, and Formal Verification, Minori, Italy, 2011, vol. 54, pp. 74–86.
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2011 | Conference Paper | IST-REx-ID: 3350
K. Chatterjee and R. Majumdar, “Minimum attention controller synthesis for omega regular objectives,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Aalborg, Denmark, 2011, vol. 6919, pp. 145–159.
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2011 | Conference Paper | IST-REx-ID: 3351 | OA
K. Chatterjee, L. Doyen, and R. Singh, “On memoryless quantitative objectives,” presented at the FCT: Fundamentals of Computation Theory, Oslo, Norway, 2011, vol. 6914, pp. 148–159.
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2011 | Journal Article | IST-REx-ID: 3352
J. Fisher, D. Harel, and T. A. Henzinger, “Biology as reactivity,” Communications of the ACM, vol. 54, no. 10, pp. 72–82, 2011.
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2011 | Journal Article | IST-REx-ID: 3353 | OA
S. Tripakis, B. Lickly, T. A. Henzinger, and E. Lee, “A theory of synchronous relational interfaces,” ACM Transactions on Programming Languages and Systems (TOPLAS), vol. 33, no. 4, 2011.
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2011 | Journal Article | IST-REx-ID: 3354
K. Chatterjee, L. De Alfaro, and T. A. Henzinger, “Qualitative concurrent parity games,” ACM Transactions on Computational Logic (TOCL), vol. 12, no. 4, 2011.
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2011 | Conference Paper | IST-REx-ID: 3355 | OA
R. Halalai, T. A. Henzinger, and V. Singh, “Quantitative evaluation of BFT protocols,” presented at the QEST: Quantitative Evaluation of Systems, Aachen, Germany, 2011, pp. 255–264.
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2011 | Conference Paper | IST-REx-ID: 3356 | OA
U. Boker, K. Chatterjee, T. A. Henzinger, and O. Kupferman, “Temporal specifications with accumulative values,” presented at the LICS: Logic in Computer Science, Toronto, Canada, 2011.
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2011 | Conference Paper | IST-REx-ID: 3357
K. Chatterjee, T. A. Henzinger, and F. Horn, “The complexity of request-response games,” presented at the LATA: Language and Automata Theory and Applications, Tarragona, Spain, 2011, vol. 6638, pp. 227–237.
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2011 | Conference Paper | IST-REx-ID: 3358 | OA
T. A. Henzinger, V. Singh, T. Wies, and D. Zufferey, “Scheduling large jobs by abstraction refinement,” presented at the EuroSys, Salzburg, Austria, 2011, pp. 329–342.
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2011 | Conference Paper | IST-REx-ID: 3359
P. Cerny and T. A. Henzinger, “From boolean to quantitative synthesis,” presented at the EMSOFT: Embedded Software , Taipei; Taiwan, 2011, pp. 149–154.
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2011 | Conference Paper | IST-REx-ID: 3360 | OA
U. Boker and T. A. Henzinger, “Determinizing discounted-sum automata,” presented at the CSL: Computer Science Logic, Bergen, Norway, 2011, vol. 12, pp. 82–96.
View | Files available | DOI
 
2011 | Conference Paper | IST-REx-ID: 3361 | OA
P. Cerny, K. Chatterjee, and T. A. Henzinger, “The complexity of quantitative information flow problems,” presented at the CSF: Computer Security Foundations, Cernay-la-Ville, France, 2011, pp. 205–217.
View | Files available | DOI
 
2011 | Conference Paper | IST-REx-ID: 3362 | OA
J. Fisher, T. A. Henzinger, D. Nickovic, N. Piterman, A. Singh, and M. Vardi, “Dynamic reactive modules,” presented at the CONCUR: Concurrency Theory, Aachen, Germany, 2011, vol. 6901, pp. 404–418.
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2011 | Preprint | IST-REx-ID: 3363 | OA
K. Chatterjee, T. A. Henzinger, and M. Tracol, “The decidability frontier for probabilistic automata on infinite words.” ArXiv.
View | Download Preprint (ext.) | arXiv
 
2011 | Journal Article | IST-REx-ID: 3364 | OA
F. Didier, T. A. Henzinger, M. Mateescu, and V. Wolf, “Approximation of event probabilities in noisy cellular processes,” Theoretical Computer Science, vol. 412, no. 21, pp. 2128–2141, 2011.
View | Files available | DOI
 
2011 | Conference Paper | IST-REx-ID: 3365 | OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and R. Singh, “QUASY: quantitative synthesis tool,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Saarbrucken, Germany, 2011, vol. 6605, pp. 267–271.
View | Files available | DOI
 
2011 | Conference Paper | IST-REx-ID: 3366 | OA
P. Cerny, K. Chatterjee, T. A. Henzinger, A. Radhakrishna, and R. Singh, “Quantitative synthesis for concurrent programs,” presented at the CAV: Computer Aided Verification, Snowbird, USA, 2011, vol. 6806, pp. 243–259.
View | Files available | DOI
 
2011 | Conference Paper | IST-REx-ID: 3367
C. Chen and M. Kerber, “An output sensitive algorithm for persistent homology,” presented at the SoCG: Symposium on Computational Geometry, Paris, France, 2011, pp. 207–216.
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2011 | Journal Article | IST-REx-ID: 3368 | OA
G. Krens, S. Möllmert, and C.-P. J. Heisenberg, “Enveloping cell layer differentiation at the surface of zebrafish germ layer tissue explants,” PNAS, vol. 108, no. 3, pp. E9–E10, 2011.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2011 | Journal Article | IST-REx-ID: 3369
A. Pernia-Andrade and P. M. Jonas, “The multiple faces of RIM,” Neuron, vol. 69, no. 2, pp. 185–187, 2011.
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2011 | Journal Article | IST-REx-ID: 3370 | OA
A. Kupczok, “Consequences of different null models on the tree shape bias of supertree methods,” Systematic Biology, vol. 60, no. 2, pp. 218–225, 2011.
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2011 | Journal Article | IST-REx-ID: 3371 | OA
M. K. Sixt and C. Parent, “Cells on the move in Philadelphia,” Molecular Biology and Evolution, vol. 22, no. 6, p. 724, 2011.
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2011 | Journal Article | IST-REx-ID: 3372 | OA
P. Abbot et al., “Inclusive fitness theory and eusociality,” Nature, vol. 471, no. 7339, pp. E1–E4, 2011.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2011 | Journal Article | IST-REx-ID: 3373 | OA
M. Jahnel, M. Behrndt, A. Jannasch, E. Schaeffer, and S. Grill, “Measuring the complete force field of an optical trap,” Optics Letters, vol. 36, no. 7, pp. 1260–1262, 2011.
View | Files available | DOI | Download Published Version (ext.)
 
2011 | Journal Article | IST-REx-ID: 3374 | OA
G. Tkacik and A. Walczak, “Information transmission in genetic regulatory networks a review,” Journal of Physics: Condensed Matter, vol. 23, no. 15, 2011.
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2011 | Journal Article | IST-REx-ID: 3375 | OA
H. de Vladar and N. H. Barton, “The statistical mechanics of a polygenic character under stabilizing selection mutation and drift,” Journal of the Royal Society Interface, vol. 8, no. 58, pp. 720–739, 2011.
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2011 | Journal Article | IST-REx-ID: 3376 | OA
M. T. Bollenbach and R. Kishony, “Resolution of gene regulatory conflicts caused by combinations of antibiotics,” Molecular Cell, vol. 42, no. 4, pp. 413–425, 2011.
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2011 | Journal Article | IST-REx-ID: 3377 | OA
H. Edelsbrunner, D. Morozov, and A. Patel, “Quantifying transversality by measuring the robustness of intersections,” Foundations of Computational Mathematics, vol. 11, no. 3, pp. 345–361, 2011.
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2011 | Journal Article | IST-REx-ID: 3378
P. Bendich and J. Harer, “Persistent intersection homology,” Foundations of Computational Mathematics, vol. 11, no. 3, pp. 305–336, 2011.
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2011 | Journal Article | IST-REx-ID: 3379 | OA
R. Row, J.-L. Maître, B. Martin, P. Stockinger, C.-P. J. Heisenberg, and D. Kimelman, “Completion of the epithelial to mesenchymal transition in zebrafish mesoderm requires Spadetail,” Developmental Biology, vol. 354, no. 1, pp. 102–110, 2011.
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2011 | Journal Article | IST-REx-ID: 3380 | OA
S. Logeswaran and N. H. Barton, “Mapping Mendelian traits in asexual progeny using changes in marker allele frequency,” Genetical Research, vol. 93, no. 3, pp. 221–232, 2011.
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2011 | Journal Article | IST-REx-ID: 3381 | OA
T. A. Henzinger, B. Jobstmann, and V. Wolf, “Formalisms for specifying Markovian population models,” IJFCS: International Journal of Foundations of Computer Science, vol. 22, no. 4, pp. 823–841, 2011.
View | Files available | DOI
 
2011 | Journal Article | IST-REx-ID: 3382
O. Kroemer, C. Lampert, and J. Peters, “Learning dynamic tactile sensing with robust vision based training,” IEEE Transactions on Robotics, vol. 27, no. 3, pp. 545–557, 2011.
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2011 | Journal Article | IST-REx-ID: 3383
C.-P. J. Heisenberg, “Invited Lectures ‐ Symposia Area,” FEBS Journal, vol. 278, no. S1, pp. 24–24, 2011.
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2011 | Journal Article | IST-REx-ID: 3384 | OA
G. Tkačik et al., “Natural images from the birthplace of the human eye,” PLoS One, vol. 6, no. 6, 2011.
View | Files available | DOI
 
2011 | Journal Article | IST-REx-ID: 3385
M. K. Sixt, “Interstitial locomotion of leukocytes,” Immunology Letters, vol. 138, no. 1, pp. 32–34, 2011.
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2011 | Journal Article | IST-REx-ID: 3386
A. Schrempf, S. Cremer, and J. Heinze, “Social influence on age and reproduction reduced lifespan and fecundity in multi queen ant colonies,” Journal of Evolutionary Biology, vol. 24, no. 7, pp. 1455–1461, 2011.
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