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2902 Publications

2011 | Conference Paper | IST-REx-ID: 3356 | OA
Boker, Udi, Krishnendu Chatterjee, Thomas A Henzinger, and Orna Kupferman. “Temporal Specifications with Accumulative Values.” IEEE, 2011. https://doi.org/10.1109/LICS.2011.33.
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2011 | Conference Paper | IST-REx-ID: 3357
Chatterjee, Krishnendu, Thomas A Henzinger, and Florian Horn. “The Complexity of Request-Response Games.” edited by Adrian-Horia Dediu, Shunsuke Inenaga, and Carlos Martín-Vide, 6638:227–37. Springer, 2011. https://doi.org/10.1007/978-3-642-21254-3_17.
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2011 | Conference Paper | IST-REx-ID: 3358 | OA
Henzinger, Thomas A, Vasu Singh, Thomas Wies, and Damien Zufferey. “Scheduling Large Jobs by Abstraction Refinement,” 329–42. ACM, 2011. https://doi.org/10.1145/1966445.1966476.
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2011 | Conference Paper | IST-REx-ID: 3359
Cerny, Pavol, and Thomas A Henzinger. “From Boolean to Quantitative Synthesis,” 149–54. ACM, 2011. https://doi.org/10.1145/2038642.2038666.
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2011 | Conference Paper | IST-REx-ID: 3360 | OA
Boker, Udi, and Thomas A Henzinger. “Determinizing Discounted-Sum Automata,” 12:82–96. Springer, 2011. https://doi.org/10.4230/LIPIcs.CSL.2011.82.
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2011 | Conference Paper | IST-REx-ID: 3361 | OA
Cerny, Pavol, Krishnendu Chatterjee, and Thomas A Henzinger. “The Complexity of Quantitative Information Flow Problems,” 205–17. IEEE, 2011. https://doi.org/10.1109/CSF.2011.21.
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2011 | Conference Paper | IST-REx-ID: 3362 | OA
Fisher, Jasmin, Thomas A Henzinger, Dejan Nickovic, Nir Piterman, Anmol Singh, and Moshe Vardi. “Dynamic Reactive Modules,” 6901:404–18. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2011. https://doi.org/10.1007/978-3-642-23217-6_27.
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2011 | Preprint | IST-REx-ID: 3363 | OA
Chatterjee, Krishnendu, Thomas A Henzinger, and Mathieu Tracol. “The Decidability Frontier for Probabilistic Automata on Infinite Words.” ArXiv, n.d.
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2011 | Journal Article | IST-REx-ID: 3364 | OA
Didier, Frédéric, Thomas A Henzinger, Maria Mateescu, and Verena Wolf. “Approximation of Event Probabilities in Noisy Cellular Processes.” Theoretical Computer Science 412, no. 21 (2011): 2128–41. https://doi.org/10.1016/j.tcs.2010.10.022.
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
Chatterjee, Krishnendu, Thomas A Henzinger, Barbara Jobstmann, and Rohit Singh. “QUASY: Quantitative Synthesis Tool,” 6605:267–71. Springer, 2011. https://doi.org/10.1007/978-3-642-19835-9_24.
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2011 | Conference Paper | IST-REx-ID: 3366 | OA
Cerny, Pavol, Krishnendu Chatterjee, Thomas A Henzinger, Arjun Radhakrishna, and Rohit Singh. “Quantitative Synthesis for Concurrent Programs.” edited by Ganesh Gopalakrishnan and Shaz Qadeer, 6806:243–59. Springer, 2011. https://doi.org/10.1007/978-3-642-22110-1_20.
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2011 | Conference Paper | IST-REx-ID: 3367
Chen, Chao, and Michael Kerber. “An Output Sensitive Algorithm for Persistent Homology,” 207–16. ACM, 2011. https://doi.org/10.1145/1998196.1998228.
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2011 | Journal Article | IST-REx-ID: 3368 | OA
Krens, Gabriel, Stephanie Möllmert, and Carl-Philipp J Heisenberg. “Enveloping Cell Layer Differentiation at the Surface of Zebrafish Germ Layer Tissue Explants.” PNAS 108, no. 3 (2011): E9–10. https://doi.org/10.1073/pnas.1010767108.
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2011 | Journal Article | IST-REx-ID: 3369
Pernia-Andrade, Alejandro, and Peter M Jonas. “The Multiple Faces of RIM.” Neuron 69, no. 2 (2011): 185–87. https://doi.org/10.1016/j.neuron.2011.01.010.
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2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, Anne. “Consequences of Different Null Models on the Tree Shape Bias of Supertree Methods.” Systematic Biology 60, no. 2 (2011): 218–25. https://doi.org/10.1093/sysbio/syq086.
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt, Michael K, and Carole Parent. “Cells on the Move in Philadelphia.” Molecular Biology and Evolution 22, no. 6 (2011): 724. https://doi.org/10.1091/mbc.E10-12-0958.
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot, Patrick, Jun Abe, John Alcock, Samuel Alizon, Joao Alpedrinha, Malte Andersson, Jean Andre, et al. “Inclusive Fitness Theory and Eusociality.” Nature 471, no. 7339 (2011): E1–4. https://doi.org/10.1038/nature09831.
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2011 | Journal Article | IST-REx-ID: 3373 | OA
Jahnel, Marcus, Martin Behrndt, Anita Jannasch, Erik Schaeffer, and Stephan Grill. “Measuring the Complete Force Field of an Optical Trap.” Optics Letters 36, no. 7 (2011): 1260–62. https://doi.org/10.1364/OL.36.001260.
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2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkacik, Gasper, and Aleksandra Walczak. “Information Transmission in Genetic Regulatory Networks a Review.” Journal of Physics: Condensed Matter 23, no. 15 (2011). https://doi.org/10.1088/0953-8984/23/15/153102.
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2011 | Journal Article | IST-REx-ID: 3375 | OA
Vladar, Harold de, and Nicholas H Barton. “The Statistical Mechanics of a Polygenic Character under Stabilizing Selection Mutation and Drift.” Journal of the Royal Society Interface 8, no. 58 (2011): 720–39. https://doi.org/10.1098/rsif.2010.0438.
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2011 | Journal Article | IST-REx-ID: 3376 | OA
Bollenbach, Mark Tobias, and Roy Kishony. “Resolution of Gene Regulatory Conflicts Caused by Combinations of Antibiotics.” Molecular Cell 42, no. 4 (2011): 413–25. https://doi.org/10.1016/j.molcel.2011.04.016.
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Edelsbrunner, Herbert, Dmitriy Morozov, and Amit Patel. “Quantifying Transversality by Measuring the Robustness of Intersections.” Foundations of Computational Mathematics 11, no. 3 (2011): 345–61. https://doi.org/10.1007/s10208-011-9090-8.
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2011 | Journal Article | IST-REx-ID: 3378
Bendich, Paul, and John Harer. “Persistent Intersection Homology.” Foundations of Computational Mathematics 11, no. 3 (2011): 305–36. https://doi.org/10.1007/s10208-010-9081-1.
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Row, Richard, Jean-Léon Maître, Benjamin Martin, Petra Stockinger, Carl-Philipp J Heisenberg, and David Kimelman. “Completion of the Epithelial to Mesenchymal Transition in Zebrafish Mesoderm Requires Spadetail.” Developmental Biology 354, no. 1 (2011): 102–10. https://doi.org/10.1016/j.ydbio.2011.03.025.
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Logeswaran, Sayanthan, and Nicholas H Barton. “Mapping Mendelian Traits in Asexual Progeny Using Changes in Marker Allele Frequency.” Genetical Research 93, no. 3 (2011): 221–32. https://doi.org/10.1017/S0016672311000115.
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2011 | Journal Article | IST-REx-ID: 3381 | OA
Henzinger, Thomas A, Barbara Jobstmann, and Verena Wolf. “Formalisms for Specifying Markovian Population Models.” IJFCS: International Journal of Foundations of Computer Science 22, no. 4 (2011): 823–41. https://doi.org/10.1142/S0129054111008441.
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2011 | Journal Article | IST-REx-ID: 3382
Kroemer, Oliver, Christoph Lampert, and Jan Peters. “Learning Dynamic Tactile Sensing with Robust Vision Based Training.” IEEE Transactions on Robotics 27, no. 3 (2011): 545–57. https://doi.org/10.1109/TRO.2011.2121130.
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2011 | Journal Article | IST-REx-ID: 3383
Heisenberg, Carl-Philipp J. “Invited Lectures ‐ Symposia Area.” FEBS Journal 278, no. S1 (2011): 24–24. https://doi.org/10.1111/j.1742-4658.2011.08136.x.
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2011 | Journal Article | IST-REx-ID: 3384 | OA
Tkačik, Gašper, Patrick Garrigan, Charles Ratliff, Grega Milcinski, Jennifer Klein, Lucia Seyfarth, Peter Sterling, David Brainard, and Vijay Balasubramanian. “Natural Images from the Birthplace of the Human Eye.” PLoS One 6, no. 6 (2011). https://doi.org/10.1371/journal.pone.0020409.
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2011 | Journal Article | IST-REx-ID: 3385
Sixt, Michael K. “Interstitial Locomotion of Leukocytes.” Immunology Letters 138, no. 1 (2011): 32–34. https://doi.org/10.1016/j.imlet.2011.02.013.
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2011 | Journal Article | IST-REx-ID: 3386
Schrempf, Alexandra, Sylvia Cremer, and Jürgen Heinze. “Social Influence on Age and Reproduction Reduced Lifespan and Fecundity in Multi Queen Ant Colonies.” Journal of Evolutionary Biology 24, no. 7 (2011): 1455–61. https://doi.org/10.1111/j.1420-9101.2011.02278.x.
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2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok, Anne. “Split Based Computation of Majority Rule Supertrees.” BMC Evolutionary Biology 11, no. 205 (2011). https://doi.org/10.1186/1471-2148-11-205.
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2011 | Journal Article | IST-REx-ID: 3388 | OA
Ugelvig, Line V, Per Nielsen, Jacobus Boomsma, and David Nash. “Reconstructing Eight Decades of Genetic Variation in an Isolated Danish Population of the Large Blue Butterfly Maculinea Arion.” BMC Evolutionary Biology 11, no. 201 (2011). https://doi.org/10.1186/1471-2148-11-201.
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2011 | Journal Article | IST-REx-ID: 3389
Blaschko, Matthew, Jacquelyn Shelton, Andreas Bartels, Christoph Lampert, and Arthur Gretton. “Semi Supervised Kernel Canonical Correlation Analysis with Application to Human FMRI.” Pattern Recognition Letters 32, no. 11 (2011): 1572–83. https://doi.org/10.1016/j.patrec.2011.02.011.
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, Nicholas H, and Alison Etheridge. “The Relation between Reproductive Value and Genetic Contribution.” Genetics 188, no. 4 (2011): 953–73. https://doi.org/10.1534/genetics.111.127555.
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2011 | Journal Article | IST-REx-ID: 3391 | OA
Vladar, Harold de, and Nicholas H Barton. “The Contribution of Statistical Physics to Evolutionary Biology.” Trends in Ecology and Evolution 26, no. 8 (2011): 424–32. https://doi.org/10.1016/j.tree.2011.04.002.
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2011 | Journal Article | IST-REx-ID: 3392
Soriano, Silvia, Miroslav Hons, Kathrin Schumann, Varsha Kumar, Timo Dennier, Ruth Lyck, Michael K Sixt, and Jens Stein. “In Vivo Analysis of Uropod Function during Physiological T Cell Trafficking.” Journal of Immunology 187, no. 5 (2011): 2356–64. https://doi.org/10.4049/jimmunol.1100935.
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2011 | Journal Article | IST-REx-ID: 3393 | OA
Barton, Nicholas H, and Michael Turelli. “Spatial Waves of Advance with Bistable Dynamics: Cytoplasmic and Genetic Analogues of Allee Effects.” American Naturalist 178, no. 3 (2011): E48–75. https://doi.org/10.1086/661246.
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2011 | Journal Article | IST-REx-ID: 3394 | OA
Polechova, Jitka, and Nicholas H Barton. “Genetic Drift Widens the Expected Cline but Narrows the Expected Cline Width.” Genetics 189, no. 1 (2011): 227–35. https://doi.org/10.1534/genetics.111.129817.
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2011 | Journal Article | IST-REx-ID: 3395
Palero, Ferran, Pere Abello, Enrique Macpherson, Mark Beaumont, and Marta Pascual. “Effect of Oceanographic Barriers and Overfishing on the Population Genetic Structure of the European Spiny Lobster Palinurus Elephas .” Biological Journal of the Linnean Society 104, no. 2 (2011): 407–18. https://doi.org/10.1111/j.1095-8312.2011.01728.x.
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Stockinger, Petra, Carl-Philipp J Heisenberg, and Jean-Léon Maître. “Defective Neuroepithelial Cell Cohesion Affects Tangential Branchiomotor Neuron Migration in the Zebrafish Neural Tube.” Development 138, no. 21 (2011): 4673–83. https://doi.org/10.1242/dev.071233.
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2011 | Journal Article | IST-REx-ID: 3397 | OA
Maître, Jean-Léon, and Carl-Philipp J Heisenberg. “The Role of Adhesion Energy in Controlling Cell-Cell Contacts.” Current Opinion in Cell Biology 23, no. 5 (2011): 508–14. https://doi.org/10.1016/j.ceb.2011.07.004.
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2011 | Journal Article | IST-REx-ID: 3399 | OA
Cremer, Sylvia, Alexandra Schrempf, and Jürgen Heinze. “Competition and Opportunity Shape the Reproductive Tactics of Males in the Ant Cardiocondyla Obscurior.” PLoS One 6, no. 3 (2011). https://doi.org/10.1371/journal.pone.0017323.
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2011 | Journal Article | IST-REx-ID: 3405 | OA
Janovjak, Harald L, Guillaume Sandoz, and Ehud Isacoff. “Modern Ionotropic Glutamate Receptor with a K+ Selectivity Signature Sequence.” Nature Communications 2, no. 232 (2011): 1–6. https://doi.org/10.1038/ncomms1231.
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2011 | Journal Article | IST-REx-ID: 3429
Plachta, Nicolas, Mark Tobias Bollenbach, Shirley Pease, Scott Fraser, and Periklis Pantazis. “Oct4 Kinetics Predict Cell Lineage Patterning in the Early Mammalian Embryo.” Nature Cell Biology 13, no. 2 (2011): 117–23. https://doi.org/10.1038/ncb2154.
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2011 | Journal Article | IST-REx-ID: 3505 | OA
Sixt, Michael K, and Tim Lämmermann. “In Vitro Analysis of Chemotactic Leukocyte Migration in 3D Environments.” Cell Migration 769 (2011): 149–65. https://doi.org/10.1007/978-1-61779-207-6_11.
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2011 | Journal Article | IST-REx-ID: 3771
Pavan, Ana, Felipe Martins, Fabrício Santos, Albert Ditchfield, and Rodrigo A Fernandes Redondo. “Patterns of Diversification in Two Species of Short-Tailed Bats (Carollia Gray, 1838): The Effects of Historical Fragmentation of Brazilian Rainforests.” Biological Journal of the Linnean Society 102, no. 3 (2011): 527–39. https://doi.org/10.1111/j.1095-8312.2010.01601.x.
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2011 | Journal Article | IST-REx-ID: 3778 | OA
Barton, Nicholas H. “Estimating Linkage Disequilibria.” Heredity 106, no. 2 (2011): 205–6. https://doi.org/10.1038/hdy.2010.67.
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2011 | Journal Article | IST-REx-ID: 3781
Fasy, Brittany Terese. “The Difference in Length of Curves in R^n.” Acta Sci. Math. (Szeged) 77, no. 1–2 (2011): 359–67.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
Palero, Ferran, Guillermo Guerao, Paul Clark, and Pere Abello. “Scyllarus Arctus (Crustacea: Decapoda: Scyllaridae) Final Stage Phyllosoma Identified by DNA Analysis, with Morphological Description.” Journal of the Marine Biological Association of the United Kingdom 91, no. 2 (2011): 485–92. https://doi.org/10.1017/S0025315410000287.
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