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2782 Publications

2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkacik G, Walczak A. Information transmission in genetic regulatory networks a review. Journal of Physics: Condensed Matter. 2011;23(15). doi:10.1088/0953-8984/23/15/153102
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2011 | Journal Article | IST-REx-ID: 3375 | OA
de Vladar H, Barton NH. The statistical mechanics of a polygenic character under stabilizing selection mutation and drift. Journal of the Royal Society Interface. 2011;8(58):720-739. doi:10.1098/rsif.2010.0438
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2011 | Journal Article | IST-REx-ID: 3376 | OA
Bollenbach MT, Kishony R. Resolution of gene regulatory conflicts caused by combinations of antibiotics. Molecular Cell. 2011;42(4):413-425. doi:10.1016/j.molcel.2011.04.016
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Edelsbrunner H, Morozov D, Patel A. Quantifying transversality by measuring the robustness of intersections. Foundations of Computational Mathematics. 2011;11(3):345-361. doi:10.1007/s10208-011-9090-8
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2011 | Journal Article | IST-REx-ID: 3378
Bendich P, Harer J. Persistent intersection homology. Foundations of Computational Mathematics. 2011;11(3):305-336. doi:10.1007/s10208-010-9081-1
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Row R, Maître J-L, Martin B, Stockinger P, Heisenberg C-PJ, Kimelman D. Completion of the epithelial to mesenchymal transition in zebrafish mesoderm requires Spadetail. Developmental Biology. 2011;354(1):102-110. doi:10.1016/j.ydbio.2011.03.025
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Logeswaran S, Barton NH. Mapping Mendelian traits in asexual progeny using changes in marker allele frequency. Genetical Research. 2011;93(3):221-232. doi:10.1017/S0016672311000115
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2011 | Conference Paper | IST-REx-ID: 3367
Chen C, Kerber M. An output sensitive algorithm for persistent homology. In: ACM; 2011:207-216. doi:10.1145/1998196.1998228
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2011 | Journal Article | IST-REx-ID: 3368 | OA
Krens G, Möllmert S, Heisenberg C-PJ. Enveloping cell layer differentiation at the surface of zebrafish germ layer tissue explants. PNAS. 2011;108(3):E9-E10. doi:10.1073/pnas.1010767108
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2011 | Journal Article | IST-REx-ID: 3369
Pernia-Andrade A, Jonas PM. The multiple faces of RIM. Neuron. 2011;69(2):185-187. doi:10.1016/j.neuron.2011.01.010
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt MK, Parent C. Cells on the move in Philadelphia. Molecular Biology and Evolution. 2011;22(6):724. doi:10.1091/mbc.E10-12-0958
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot P, Abe J, Alcock J, et al. Inclusive fitness theory and eusociality. Nature. 2011;471(7339):E1-E4. doi:10.1038/nature09831
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2011 | Journal Article | IST-REx-ID: 3364 | OA
Didier F, Henzinger TA, Mateescu M, Wolf V. Approximation of event probabilities in noisy cellular processes. Theoretical Computer Science. 2011;412(21):2128-2141. doi:10.1016/j.tcs.2010.10.022
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
Chatterjee K, Henzinger TA, Jobstmann B, Singh R. QUASY: quantitative synthesis tool. In: Vol 6605. Springer; 2011:267-271. doi:10.1007/978-3-642-19835-9_24
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2011 | Journal Article | IST-REx-ID: 3381 | OA
Henzinger TA, Jobstmann B, Wolf V. Formalisms for specifying Markovian population models. IJFCS: International Journal of Foundations of Computer Science. 2011;22(4):823-841. doi:10.1142/S0129054111008441
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2011 | Journal Article | IST-REx-ID: 3965
Wang B, Edelsbrunner H, Morozov D. Computing elevation maxima by searching the Gauss sphere. Journal of Experimental Algorithmics. 2011;16(2.2):1-13. doi:10.1145/1963190.1970375
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2011 | Journal Article | IST-REx-ID: 490 | OA
Schlögl A, Vidaurre C, Sander T. BioSig: The free and open source software library for biomedical signal processing. Computational Intelligence and Neuroscience. 2011;2011. doi:10.1155/2011/935364
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2011 | Journal Article | IST-REx-ID: 491
Eichner A, Sixt MK. Setting the clock for recirculating lymphocytes. Science Signaling. 2011;4(198). doi:10.1126/scisignal.2002617
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2011 | Journal Article | IST-REx-ID: 469 | OA
Vyleta N, Smith S. Spontaneous glutamate release is independent of calcium influx and tonically activated by the calcium-sensing receptor. European Journal of Neuroscience. 2011;31(12):4593-4606. doi:10.1523/JNEUROSCI.6398-10.2011
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2011 | Journal Article | IST-REx-ID: 518 | OA
Schraivogel D, Weinmann L, Beier D, et al. CAMTA1 is a novel tumour suppressor regulated by miR-9/9 * in glioblastoma stem cells. EMBO Journal. 2011;30(20):4309-4322. doi:10.1038/emboj.2011.301
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2011 | Journal Article | IST-REx-ID: 531 | OA
Guerraoui R, Henzinger TA, Singh V. Verification of STM on relaxed memory models. Formal Methods in System Design. 2011;39(3):297-331. doi:10.1007/s10703-011-0131-3
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2011 | Journal Article | IST-REx-ID: 6496 | OA
Park H, Oikonomou P, Guet CC, Cluzel P. Noise underlies switching behavior of the bacterial flagellum. Biophysical Journal. 2011;101(10):2336-2340. doi:10.1016/j.bpj.2011.09.040
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2010 | Book Chapter | IST-REx-ID: 4339 | OA
Bergmann J, Danowski P. Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch. In: Bergmann J, Danowski P, eds. Handbuch Bibliothek 2.0. Bibliotheks- und Informationspraxis 41. De Gruyter; 2010:5-20. doi:10.1515/9783110232103
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2010 | Book | IST-REx-ID: 4346 | OA
Danowski P, Bergmann J. Handbuch Bibliothek 2.0. De Gruyter; 2010.
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2010 | Conference Paper | IST-REx-ID: 4382 | OA
Guerraoui R, Henzinger TA, Kapalka M, Singh V. Transactions in the jungle. In: ACM; 2010:263-272. doi:10.1145/1810479.1810529
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2010 | Conference Paper | IST-REx-ID: 4390 | OA
Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model checking of linearizability of concurrent list implementations. In: Vol 6174. Springer; 2010:465-479. doi:10.1007/978-3-642-14295-6_41
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2010 | Technical Report | IST-REx-ID: 5390 | OA
Chatterjee K, Fijalkow N. Topological, Automata-Theoretic and Logical Characterization of Finitary Languages. IST Austria; 2010. doi:10.15479/AT:IST-2010-0002
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2010 | Technical Report | IST-REx-ID: 5391 | OA
Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model Checking of Linearizability of Concurrent List Implementations. IST Austria; 2010. doi:10.15479/AT:IST-2010-0001
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2010 | Conference Paper | IST-REx-ID: 3850
Berberich E, Halperin D, Kerber M, Pogalnikova R. Polygonal reconstruction from approximate offsets. In: TU Dortmund; 2010:12-23.
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2010 | Conference (Editor) | IST-REx-ID: 3859
Chatterjee K, Henzinger TA, eds. Formal Modeling and Analysis of Timed Systems. Vol 6246. Springer; 2010. doi:10.1007/978-3-642-15297-9
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2010 | Thesis | IST-REx-ID: 3962
Pflicke H.   Dendritic Cell Migration across Basement Membranes in the Skin. IST Austria; 2010.
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2010 | Technical Report | IST-REx-ID: 5388 | OA
Chatterjee K, Cerny P, Henzinger TA, Radhakrishna A, Singh R. Quantitative Synthesis for Concurrent Programs. IST Austria; 2010. doi:10.15479/AT:IST-2010-0004
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2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok A, Schmidt H, Von Haeseler A. Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology. 2010;5(1). doi:10.1186/1748-7188-5-37
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2010 | Journal Article | IST-REx-ID: 3303 | OA
Weissman D, Feldman M, Fisher D. The rate of fitness-valley crossing in sexual populations. Genetics. 2010;186(4):1389-1410. doi:10.1534/genetics.110.123240
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2010 | Conference Paper | IST-REx-ID: 3719 | OA
Feret J, Henzinger TA, Koeppl H, Petrov T. Lumpability abstractions of rule-based systems. In: Vol 40. Open Publishing Association; 2010:142-161.
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2010 | Journal Article | IST-REx-ID: 3772 | OA
Barton NH. Understanding adaptation in large populations. PLoS Genetics. 2010;6(6). doi:10.1371/journal.pgen.1000987
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2010 | Journal Article | IST-REx-ID: 3773 | OA
Barton NH. What role does natural selection play in speciation? Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1547):1825-1840. doi:10.1098/rstb.2010.0001
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2010 | Journal Article | IST-REx-ID: 3774
Senn H, Swanson G, Goodman S, Barton NH, Pemberton J. Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 2010;79(2):414-425. doi:10.1111/j.1365-2656.2009.01633.x
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2010 | Journal Article | IST-REx-ID: 3776 | OA
Barton NH. Genetic linkage and natural selection. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1552):2559-2569. doi:10.1098/rstb.2010.0106
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2010 | Journal Article | IST-REx-ID: 3777 | OA
Barton NH. Mutation and the evolution of recombination. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1544):1281-1294. doi:10.1098/rstb.2009.0320
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2010 | Journal Article | IST-REx-ID: 3779 | OA
Rosas U, Barton NH, Copsey L, Barbier De Reuille P, Coen E. Cryptic variation between species and the basis of hybrid performance. PLoS Biology. 2010;8(7). doi:10.1371/journal.pbio.1000429
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2010 | Conference Paper | IST-REx-ID: 3782
Chen C, Freedman D. Topology noise removal for curve  and surface evolution. In: Conference Proceedings MCV 2010. Vol 6533. Springer; 2010:31-42. doi:10.1007/978-3-642-18421-5_4
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2010 | Journal Article | IST-REx-ID: 3783
Palero F, González Candelas F, Pascual M. Microsatelight – Pipeline to expedite microsatellite analysis. Journal of Heredity. 2010;102(2):247-249. doi:10.1093/jhered/esq111
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2010 | Journal Article | IST-REx-ID: 3785
Palero F, Abello P, Macpherson E, Matthee C, Pascual M. Genetic diversity levels in fishery-exploited spiny lobsters of the Genus Palinurus (Decapoda: Achelata). Journal of Crustacean Biology. 2010;30(4):658-663. doi:10.1651/09-3192.1
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2010 | Journal Article | IST-REx-ID: 3787 | OA
Palero F, Hall S, Clark P, Johnston D, Mackenzie Dodds J, Thatje S. DNA extraction from formalin-fixed tissue: new light from the deep sea. Scientia Marina. 2010;74(3):465-470. doi:10.3989/scimar.2010.74n3465
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2010 | Journal Article | IST-REx-ID: 3788
Klopper A, Krens G, Grill S, Heisenberg C-PJ. Finite-size corrections to scaling behavior in sorted cell aggregates. The European Physical Journal E: Soft Matter and Biological Physics. 2010;33(2):99-103. doi:10.1140/epje/i2010-10642-y
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2010 | Journal Article | IST-REx-ID: 3789
Quesada-Hernández E, Caneparo L, Schneider S, et al. Stereotypical cell division orientation controls neural rod midline formation in zebrafish. Current Biology. 2010;20(21):1966-1972. doi:10.1016/j.cub.2010.10.009
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2010 | Journal Article | IST-REx-ID: 3790 | OA
Diz Muñoz A, Krieg M, Bergert M, et al. Control of directed cell migration in vivo by membrane-to-cortex attachment. PLoS Biology. 2010;8(11). doi:10.1371/journal.pbio.1000544
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2010 | Conference Paper | IST-REx-ID: 3793 | OA
Nowozin S, Gehler P, Lampert C. On parameter learning in CRF-based approaches to object class image segmentation. In: Vol 6316. Springer; 2010:98-111. doi:10.1007/978-3-642-15567-3_8
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2010 | Conference Paper | IST-REx-ID: 3794
Lampert C, Krömer O. Weakly-paired maximum covariance analysis for multimodal dimensionality reduction and transfer learning. In: Vol 6312. Springer; 2010:566-579. doi:10.1007/978-3-642-15552-9_41
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