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2984 Publications
2013 | Journal Article | IST-REx-ID: 2858 |

J. Reiter, I. Božić, B. Allen, K. Chatterjee, and M. Nowak, “The effect of one additional driver mutation on tumor progression,” Evolutionary Applications, vol. 6, no. 1. Wiley-Blackwell, pp. 34–45, 2013.
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2013 | Journal Article | IST-REx-ID: 2859 |

P. Bendich, H. Edelsbrunner, D. Morozov, and A. Patel, “Homology and robustness of level and interlevel sets,” Homology, Homotopy and Applications, vol. 15, no. 1. International Press, pp. 51–72, 2013.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2920 |

J. Compagnon and C.-P. J. Heisenberg, “Neurulation coordinating cell polarisation and lumen formation,” EMBO Journal, vol. 32, no. 1. Wiley-Blackwell, pp. 1–3, 2013.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 2919 |

P. Baster et al., “SCF^TIR1 AFB-auxin signalling regulates PIN vacuolar trafficking and auxin fluxes during root gravitropism,” EMBO Journal, vol. 32, no. 2. Wiley-Blackwell, pp. 260–274, 2013.
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| PubMed | Europe PMC
2013 | Conference Paper | IST-REx-ID: 2940 |

S. Krenn, K. Z. Pietrzak, and A. Wadia, “A counterexample to the chain rule for conditional HILL entropy, and what deniable encryption has to do with it,” presented at the TCC: Theory of Cryptography Conference, Tokyo, Japan, 2013, vol. 7785, pp. 23–39.
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2013 | Conference Paper | IST-REx-ID: 2948 |

T. Tommasi, N. Quadrianto, B. Caputo, and C. Lampert, “Beyond dataset bias: Multi-task unaligned shared knowledge transfer,” vol. 7724. Springer, pp. 1–15, 2013.
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2013 | Journal Article | IST-REx-ID: 2815
H. Edelsbrunner, B. T. Fasy, and G. Rote, “Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions,” Discrete & Computational Geometry, vol. 49, no. 4. Springer, pp. 797–822, 2013.
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2013 | Journal Article | IST-REx-ID: 3261 |

J. Dubuis, G. Tkačik, E. Wieschaus, T. Gregor, and W. Bialek, “Positional information, in bits,” PNAS, vol. 110, no. 41. National Academy of Sciences, pp. 16301–16308, 2013.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 2831 |

K. Chatterjee, M. Henzinger, M. Joglekar, and N. Shah, “Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives,” Formal Methods in System Design, vol. 42, no. 3. Springer, pp. 301–327, 2013.
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| arXiv
2013 | Journal Article | IST-REx-ID: 2939
C. Chen and M. Kerber, “An output sensitive algorithm for persistent homology,” Computational Geometry: Theory and Applications, vol. 46, no. 4. Elsevier, pp. 435–447, 2013.
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2013 | Thesis | IST-REx-ID: 1405
D. Zufferey, “Analysis of dynamic message passing programs,” IST Austria, 2013.
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2013 | Journal Article | IST-REx-ID: 450 |

M. Pickup, D. Field, D. Rowell, and A. Young, “Source population characteristics affect heterosis following genetic rescue of fragmented plant populations,” Proceedings of the Royal Society of London Series B Biological Sciences, vol. 280, no. 1750. Royal Society, The, 2013.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 476 |

D. Dickerson and D. Bilkey, “Aberrant neural synchrony in the maternal immune activation model: Using translatable measures to explore targeted interventions,” Frontiers in Behavioral Neuroscience, vol. 7, no. DEC. Frontiers Research Foundation, 2013.
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2013 | Journal Article | IST-REx-ID: 500 |

M. Ward, S. Lycett, D. Avila, J. P. Bollback, and A. Leigh Brown, “Evolutionary interactions between haemagglutinin and neuraminidase in avian influenza,” BMC Evolutionary Biology, vol. 13, no. 1. BioMed Central, 2013.
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2013 | Journal Article | IST-REx-ID: 501 |

M. Cozzuol et al., “A new species of tapir from the Amazon,” Journal of Mammalogy, vol. 94, no. 6. Oxford University Press, pp. 1331–1345, 2013.
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2013 | Journal Article | IST-REx-ID: 507 |

S. Kim et al., “Adaptor protein complex 2-mediated endocytosis is crucial for male reproductive organ development in arabidopsis,” Plant Cell, vol. 25, no. 8. American Society of Plant Biologists, pp. 2970–2985, 2013.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 508 |

E. Tarazona Santos et al., “Evolutionary dynamics of the human NADPH oxidase genes CYBB, CYBA, NCF2, and NCF4: Functional implications,” Molecular Biology and Evolution, vol. 30, no. 9. Oxford University Press, pp. 2157–2167, 2013.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 509 |

S. Di Rubbo et al., “The clathrin adaptor complex AP-2 mediates endocytosis of brassinosteroid INSENSITIVE1 in arabidopsis,” Plant Cell, vol. 25, no. 8. American Society of Plant Biologists, pp. 2986–2997, 2013.
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| PubMed | Europe PMC
2013 | Journal Article | IST-REx-ID: 516 |

B. Bargmann et al., “A map of cell type‐specific auxin responses,” Molecular Systems Biology, vol. 9, no. 1. Nature Publishing Group, 2013.
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2013 | Journal Article | IST-REx-ID: 511 |

A. Pěnčík et al., “Regulation of auxin homeostasis and gradients in Arabidopsis roots through the formation of the indole-3-acetic acid catabolite 2-oxindole-3-acetic acid,” Plant Cell, vol. 25, no. 10. American Society of Plant Biologists, pp. 3858–3870, 2013.
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| PubMed | Europe PMC
2013 | Conference Paper | IST-REx-ID: 2279 |

K. Chatterjee, L. Doyen, M. Randour, and J. Raskin, “Looking at mean-payoff and total-payoff through windows,” vol. 8172. Springer, pp. 118–132, 2013.
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2013 | Conference Paper | IST-REx-ID: 2000 |

J. Reiter, I. Božić, K. Chatterjee, and M. Nowak, “TTP: Tool for tumor progression,” in Proceedings of 25th Int. Conf. on Computer Aided Verification, St. Petersburg, Russia, 2013, vol. 8044, pp. 101–106.
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| arXiv
2013 | Technical Report | IST-REx-ID: 5399 |

J. Reiter, I. Bozic, K. Chatterjee, and M. Nowak, TTP: Tool for Tumor Progression. IST Austria, 2013.
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2013 | Technical Report | IST-REx-ID: 5400 |

K. Chatterjee, M. Chmelik, and M. Tracol, What is decidable about partially observable Markov decision processes with ω-regular objectives. IST Austria, 2013.
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2013 | Report | IST-REx-ID: 5401 |

J. Porsche, Initiatives and projects related to RD. IST Austria, 2013.
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2013 | Technical Report | IST-REx-ID: 5402 |

T. A. Henzinger and A. Sezgin, How free is your linearizable concurrent data structure? IST Austria, 2013.
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2013 | Conference Paper | IST-REx-ID: 2295 |

K. Chatterjee, M. Chmelik, and M. Tracol, “What is decidable about partially observable Markov decision processes with omega-regular objectives,” vol. 23. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, pp. 165–180, 2013.
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2013 | Technical Report | IST-REx-ID: 5403 |

K. Chatterjee and R. Ibsen-Jensen, Qualitative analysis of concurrent mean-payoff games. IST Austria, 2013.
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2013 | Technical Report | IST-REx-ID: 5404 |

K. Chatterjee and R. Ibsen-Jensen, The complexity of ergodic games. IST Austria, 2013.
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2013 | Technical Report | IST-REx-ID: 5410 |

U. Ahmed, K. Chatterjee, and S. Gulwani, Automatic generation of alternative starting positions for traditional board games. IST Austria, 2013.
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2013 | Technical Report | IST-REx-ID: 5409 |

K. Chatterjee, R. Ibsen-Jensen, and R. Majumdar, Edit distance for timed automata. IST Austria, 2013.
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2013 | Technical Report | IST-REx-ID: 5406 |

K. Chatterjee, T. A. Henzinger, J. Otop, and A. Pavlogiannis, Distributed synthesis for LTL Fragments. IST Austria, 2013.
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2013 | Report | IST-REx-ID: 5407 |

J. Porsche, Technical requirements and features. IST Austria, 2013.
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2013 | Conference Paper | IST-REx-ID: 1376
K. Chatterjee, T. A. Henzinger, J. Otop, and A. Pavlogiannis, “Distributed synthesis for LTL fragments,” in 13th International Conference on Formal Methods in Computer-Aided Design, Portland, OR, United States, 2013, pp. 18–25.
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2013 | Technical Report | IST-REx-ID: 5405 |

K. Chatterjee, L. Doyen, H. Gimbert, and Y. Oualhadj, Perfect-information stochastic mean-payoff parity games. IST Austria, 2013.
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2013 | Technical Report | IST-REx-ID: 5408 |

K. Chatterjee, L. Doyen, S. Nain, and M. Vardi, The complexity of partial-observation stochastic parity games with finite-memory strategies. IST Austria, 2013.
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2013 | Conference Paper | IST-REx-ID: 2327 |

T. A. Henzinger and J. Otop, “From model checking to model measuring,” vol. 8052. Springer, pp. 273–287, 2013.
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2013 | Book Chapter | IST-REx-ID: 5747 |

C. Dragoi, A. Gupta, and T. A. Henzinger, “Automatic Linearizability Proofs of Concurrent Objects with Cooperating Updates,” in Computer Aided Verification, vol. 8044, Berlin, Heidelberg: Springer Berlin Heidelberg, 2013, pp. 174–190.
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2013 | Technical Report | IST-REx-ID: 6440 |

T. A. Henzinger, H. Payer, and A. Sezgin, Replacing competition with cooperation to achieve scalable lock-free FIFO queues . IST Austria, 2013.
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