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2890 Publications

2013 | Conference (Editor) | IST-REx-ID: 2288
Gupta, Ashutosh, and Thomas A Henzinger, eds. Computational Methods in Systems Biology. Vol. 8130. Springer, 2013. https://doi.org/10.1007/978-3-642-40708-6.
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2013 | Journal Article | IST-REx-ID: 2289 | OA
Henzinger, Thomas A. “Quantitative Reactive Modeling and Verification.” Computer Science Research and Development 28, no. 4 (2013): 331–44. https://doi.org/10.1007/s00450-013-0251-7.
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2013 | Journal Article | IST-REx-ID: 2290 | OA
Boutté, Yohann, Kristoffer Jonsson, Heather Mcfarlane, Errin Johnson, Delphine Gendre, Ranjan Swarup, Jirí Friml, Lacey Samuels, Stéphanie Robert, and Rishikesh Bhalerao. “ECHIDNA Mediated Post Golgi Trafficking of Auxin Carriers for Differential Cell Elongation.” PNAS 110, no. 40 (2013): 16259–64. https://doi.org/10.1073/pnas.1309057110.
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2013 | Conference Paper | IST-REx-ID: 2291 | OA
Ferrara, Anna, Georg Fuchsbauer, and Bogdan Warinschi. “Cryptographically Enforced RBAC,” 115–29. IEEE, 2013. https://doi.org/10.1109/CSF.2013.15.
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2013 | Conference (Editor) | IST-REx-ID: 2292
Chatterjee, Krishnendu, and Jiri Sgall, eds. Mathematical Foundations of Computer Science 2013. Vol. 8087. Lecture Notes in Computer Science. Springer, 2013. https://doi.org/10.1007/978-3-642-40313-2.
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2013 | Conference Paper | IST-REx-ID: 2293 | OA
Sharmanska, Viktoriia, Novi Quadrianto, and Christoph Lampert. “Learning to Rank Using Privileged Information,” 825–32. IEEE, 2013. https://doi.org/10.1109/ICCV.2013.107.
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2013 | Conference Paper | IST-REx-ID: 2294 | OA
Kazmar, Tomas, Evgeny Kvon, Alexander Stark, and Christoph Lampert. “Drosophila Embryo Stage Annotation Using Label Propagation.” IEEE, 2013. https://doi.org/10.1109/ICCV.2013.139.
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2013 | Conference Paper | IST-REx-ID: 2295 | OA
Chatterjee, Krishnendu, Martin Chmelik, and Mathieu Tracol. “What Is Decidable about Partially Observable Markov Decision Processes with Omega-Regular Objectives.” Leibniz International Proceedings in Informatics. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013. https://doi.org/10.4230/LIPIcs.CSL.2013.165.
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2013 | Journal Article | IST-REx-ID: 2297 | OA
Seiringer, Robert. “Hot Topics in Cold Gases: A Mathematical Physics Perspective.” Japanese Journal of Mathematics 8, no. 2 (2013): 185–232. https://doi.org/10.1007/s11537-013-1264-5.
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2013 | Conference Paper | IST-REx-ID: 2298 | OA
Dragoi, Cezara, Constantin Enea, and Mihaela Sighireanu. “Local Shape Analysis for Overlaid Data Structures,” 7935:150–71. Springer, 2013. https://doi.org/10.1007/978-3-642-38856-9_10.
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2013 | Journal Article | IST-REx-ID: 2299 | OA
Godhal, Yashdeep, Krishnendu Chatterjee, and Thomas A Henzinger. “Synthesis of AMBA AHB from Formal Specification: A Case Study.” International Journal on Software Tools for Technology Transfer 15, no. 5–6 (2013): 585–601. https://doi.org/10.1007/s10009-011-0207-9.
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2013 | Journal Article | IST-REx-ID: 2300 | OA
Giuliani, Alessandro, Élliott Lieb, and Robert Seiringer. “Realization of Stripes and Slabs in Two and Three Dimensions.” Physical Review B 88, no. 6 (2013). https://doi.org/10.1103/PhysRevB.88.064401.
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2013 | Conference Paper | IST-REx-ID: 2301
Desai, Ankush, Vivek Gupta, Ethan Jackson, Shaz Qadeer, Sriram Rajamani, and Damien Zufferey. “P: Safe Asynchronous Event-Driven Programming.” In Proceedings of the 34th ACM SIGPLAN Conference on Programming Language Design and Implementation, 321–31. ACM, 2013. https://doi.org/10.1145/2491956.2462184.
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2013 | Journal Article | IST-REx-ID: 2303
Hippenmeyer, Simon. “Dissection of Gene Function at Clonal Level Using Mosaic Analysis with Double Markers.” Frontiers in Biology 8, no. 6 (2013): 557–68. https://doi.org/10.1007/s11515-013-1279-6.
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2013 | Journal Article | IST-REx-ID: 2304
Pausinger, Florian. “Van Der Corput Sequences and Linear Permutations.” Electronic Notes in Discrete Mathematics 43 (2013): 43–50. https://doi.org/10.1016/j.endm.2013.07.008.
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2013 | Conference Paper | IST-REx-ID: 2305 | OA
Brázdil, Tomáš, Krishnendu Chatterjee, Vojtěch Forejt, and Antonín Kučera. “Trading Performance for Stability in Markov Decision Processes.” In 28th Annual ACM/IEEE Symposium, 331–40. IEEE, 2013. https://doi.org/10.1109/LICS.2013.39.
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2013 | Book | IST-REx-ID: 2306 | OA
Danowski, Patrick, and Adrian Pohl. (Open) Linked Data in Bibliotheken. Vol. 50. De Gruyter, 2013. https://doi.org/10.1515/9783110278736.
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2013 | Conference Paper | IST-REx-ID: 2327 | OA
Henzinger, Thomas A, and Jan Otop. “From Model Checking to Model Measuring.” Lecture Notes in Computer Science. Springer, 2013. https://doi.org/10.1007/978-3-642-40184-8_20.
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2013 | Conference Paper | IST-REx-ID: 2328 | OA
Henzinger, Thomas A, Ali Sezgin, and Viktor Vafeiadis. “Aspect-Oriented Linearizability Proofs.” Lecture Notes in Computer Science. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2013. https://doi.org/10.1007/978-3-642-40184-8_18.
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2013 | Conference Paper | IST-REx-ID: 2329 | OA
Chatterjee, Krishnendu, and Yaron Velner. “Hyperplane Separation Technique for Multidimensional Mean-Payoff Games.” Lecture Notes in Computer Science. Springer, 2013. https://doi.org/10.1007/978-3-642-40184-8_35.
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2013 | Journal Article | IST-REx-ID: 2410 | OA
Fernandes Redondo, Rodrigo A, Anne Kupczok, Gertraud Stift, and Jonathan P Bollback. “Complete Genome Sequence of the Novel Phage MG-B1 Infecting Bacillus Weihenstephanensis.” Genome Announcements 1, no. 3 (2013). https://doi.org/10.1128/genomeA.00216-13.
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2013 | Journal Article | IST-REx-ID: 2412 | OA
Kupczok, Anne, and Jonathan P Bollback. “Probabilistic Models for CRISPR Spacer Content Evolution .” BMC Evolutionary Biology 13, no. 1 (2013): 54–54. https://doi.org/10.1186/1471-2148-13-54.
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2013 | Book Chapter | IST-REx-ID: 2413
Valderrama, Mario, Vicente Botella Soler, and Michel Le Van Quyen. “Neuronal Oscillations Scale up and Scale down the Brain Dynamics .” In Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain, edited by Misha Meyer and Z. Pesenson. Wiley-VCH, 2013. https://doi.org/10.1002/9783527671632.ch08.
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2013 | Journal Article | IST-REx-ID: 2443
Simon, Sibu, Martin Kubeš, Pawel Baster, Stéphanie Robert, Petre Dobrev, Jirí Friml, Jan Petrášek, and Eva Zažímalová. “Defining the Selectivity of Processes along the Auxin Response Chain: A Study Using Auxin Analogues.” New Phytologist 200, no. 4 (2013): 1034–48. https://doi.org/10.1111/nph.12437.
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2013 | Conference Paper | IST-REx-ID: 2444 | OA
Chatterjee, Krishnendu, and Jakub Ła̧Cki. “Faster Algorithms for Markov Decision Processes with Low Treewidth.” Lecture Notes in Computer Science. Springer, 2013. https://doi.org/10.1007/978-3-642-39799-8_36.
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2013 | Conference Paper | IST-REx-ID: 2445 | OA
Cerny, Pavol, Thomas A Henzinger, Arjun Radhakrishna, Leonid Ryzhyk, and Thorsten Tarrach. “Efficient Synthesis for Concurrency by Semantics-Preserving Transformations,” 8044:951–67. Springer, 2013. https://doi.org/10.1007/978-3-642-39799-8_68.
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2013 | Conference Paper | IST-REx-ID: 2446 | OA
Chatterjee, Krishnendu, Andreas Gaiser, and Jan Kretinsky. “Automata with Generalized Rabin Pairs for Probabilistic Model Checking and LTL Synthesis.” Lecture Notes in Computer Science. Springer, 2013. https://doi.org/10.1007/978-3-642-39799-8_37.
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2013 | Conference Paper | IST-REx-ID: 2447 | OA
Piskac, Ruzica, Thomas Wies, and Damien Zufferey. “Automating Separation Logic Using SMT.” Lecture Notes in Computer Science. Springer, 2013. https://doi.org/10.1007/978-3-642-39799-8_54.
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2013 | Journal Article | IST-REx-ID: 2448 | OA
Remy, Estelle, Pawel Baster, Jirí Friml, and Paula Duque. “ZIFL1.1 Transporter Modulates Polar Auxin Transport by Stabilizing Membrane Abundance of Multiple PINs in Arabidopsis Root Tip.” Plant Signaling & Behavior 8, no. 10 (2013). https://doi.org/10.4161/psb.25688.
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2013 | Journal Article | IST-REx-ID: 2449
Nodzyński, Tomasz, Murguel Feraru, Sibylle Hirsch, Riet De Rycke, Claudiu Nicuales, Jelle Van Leene, Geert De Jaeger, Steffen Vanneste, and Jirí Friml. “Retromer Subunits VPS35A and VPS29 Mediate Prevacuolar Compartment (PVC) Function in Arabidopsis.” Molecular Plant 6, no. 6 (2013): 1849–62. https://doi.org/10.1093/mp/sst044.
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2013 | Journal Article | IST-REx-ID: 2466 | OA
Ando, Ryoichi, Nils Thuerey, and Christopher J Wojtan. “Highly Adaptive Liquid Simulations on Tetrahedral Meshes.” ACM Transactions on Graphics 32, no. 4 (2013). https://doi.org/10.1145/2461912.2461982.
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2013 | Journal Article | IST-REx-ID: 2467 | OA
Bernstein, Gilbert, and Christopher J Wojtan. “Putting Holes in Holey Geometry: Topology Change for Arbitrary Surfaces.” ACM Transactions on Graphics 32, no. 4 (2013). https://doi.org/10.1145/2461912.2462027.
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2013 | Journal Article | IST-REx-ID: 2468 | OA
Bojsen-Hansen, Morten, and Christopher J Wojtan. “Liquid Surface Tracking with Error Compensation.” ACM Transactions on Graphics 32, no. 4 (2013). https://doi.org/10.1145/2461912.2461991.
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2013 | Journal Article | IST-REx-ID: 2469 | OA
Maître, Jean-Léon, and Carl-Philipp J Heisenberg. “Three Functions of Cadherins in Cell Adhesion.” Current Biology 23, no. 14 (2013): R626–33. https://doi.org/10.1016/j.cub.2013.06.019.
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2013 | Journal Article | IST-REx-ID: 2470 | OA
Čovanová, Milada, Michael Sauer, Jan Rychtář, Jiří Friml, Jan Petrášek, and Eva Zažímalová. “Overexpression of the Auxin Binding PROTEIN1 Modulates PIN-Dependent Auxin Transport in Tobacco Cells.” PLoS One 8, no. 7 (2013). https://doi.org/10.1371/journal.pone.0070050.
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2013 | Journal Article | IST-REx-ID: 2471 | OA
Sanchez-Romero, Inmaculada, Antonio Ariza, Keith Wilson, Michael Skjøt, Jesper Vind, Leonardo De Maria, Lars Skov, and Jose Sánchez Ruiz. “Mechanism of Protein Kinetic Stabilization by Engineered Disulfide Crosslinks.” PLoS One 8, no. 7 (2013). https://doi.org/10.1371/journal.pone.0070013.
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2013 | Journal Article | IST-REx-ID: 2472 | OA
Cazzonelli, Christopher, Marleen Vanstraelen, Sibu Simon, Kuide Yin, Ashley Carron Arthur, Nazia Nisar, Gauri Tarle, et al. “Role of the Arabidopsis PIN6 Auxin Transporter in Auxin Homeostasis and Auxin-Mediated Development.” PLoS One 8, no. 7 (2013). https://doi.org/10.1371/journal.pone.0070069.
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2013 | Journal Article | IST-REx-ID: 2473 | OA
Barton, Nicholas H, Alison Etheridge, Jerome Kelleher, and Amandine Véber. “Genetic Hitch-Hiking in Spatially Extended Populations.” Theoretical Population Biology 87, no. 8 (2013): 75–89. https://doi.org/10.1016/j.tpb.2012.12.001.
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2013 | Journal Article | IST-REx-ID: 2516
Lampert, Christoph, Hannes Nickisch, and Stefan Harmeling. “Attribute-Based Classification for Zero-Shot Learning of Object Categories.” IEEE Transactions on Pattern Analysis and Machine Intelligence 36, no. 3 (2013): 453–65. https://doi.org/10.1109/TPAMI.2013.140.
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2013 | Conference Paper | IST-REx-ID: 2517 | OA
Almagor, Shaull, Udi Boker, and Orna Kupferman. “Formalizing and Reasoning about Quality.” Lecture Notes in Computer Science. Springer, 2013. https://doi.org/10.1007/978-3-642-39212-2_3.
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2013 | Conference Paper | IST-REx-ID: 2518 | OA
Kolmogorov, Vladimir. “The Power of Linear Programming for Finite-Valued CSPs: A Constructive Characterization,” 7965:625–36. Springer, 2013. https://doi.org/10.1007/978-3-642-39206-1_53.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2013 | Conference Paper | IST-REx-ID: 2520 | OA
Quadrianto, Novi, Viktoriia Sharmanska, David Knowles, and Zoubin Ghahramani. “The Supervised IBP: Neighbourhood Preserving Infinite Latent Feature Models.” In Proceedings of the 29th Conference Uncertainty in Artificial Intelligence, 527–36. AUAI Press, 2013.
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2013 | Journal Article | IST-REx-ID: 450 | OA
Pickup, Melinda, David Field, David Rowell, and Andrew Young. “Source Population Characteristics Affect Heterosis Following Genetic Rescue of Fragmented Plant Populations.” Proceedings of the Royal Society of London Series B Biological Sciences 280, no. 1750 (2013). https://doi.org/10.1098/rspb.2012.2058.
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2013 | Journal Article | IST-REx-ID: 476 | OA
Dickerson, Desiree, and David Bilkey. “Aberrant Neural Synchrony in the Maternal Immune Activation Model: Using Translatable Measures to Explore Targeted Interventions.” Frontiers in Behavioral Neuroscience 7, no. DEC (2013). https://doi.org/10.3389/fnbeh.2013.00217.
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2013 | Journal Article | IST-REx-ID: 499
Wakamoto, Yurichi, Neraaj Dhar, Remy P Chait, Katrin Schneider, François Signorino Gelo, Stanislas Leibler, and John Mckinney. “Dynamic Persistence of Antibiotic-Stressed Mycobacteria.” Science 339, no. 6115 (2013): 91–95. https://doi.org/10.1126/science.1229858.
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2013 | Journal Article | IST-REx-ID: 500 | OA
Ward, Melissa, Samantha Lycett, Dorita Avila, Jonathan P Bollback, and Andrew Leigh Brown. “Evolutionary Interactions between Haemagglutinin and Neuraminidase in Avian Influenza.” BMC Evolutionary Biology 13, no. 1 (2013). https://doi.org/10.1186/1471-2148-13-222.
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2013 | Journal Article | IST-REx-ID: 501 | OA
Cozzuol, Mario, Camila Clozato, Elizete Holanda, Flávio Rodrigues, Samuel Nienow, Benoit De Thoisy, Rodrigo A Fernandes Redondo, and Fabrício Santos. “A New Species of Tapir from the Amazon.” Journal of Mammalogy 94, no. 6 (2013): 1331–45. https://doi.org/10.1644/12-MAMM-A-169.1.
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2013 | Journal Article | IST-REx-ID: 502
Blazy, Olivier, Georg Fuchsbauer, David Pointcheval, and Damien Vergnaud. “Short Blind Signatures.” Journal of Computer Security 21, no. 5 (2013): 627–61. https://doi.org/10.3233/JCS-130477.
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2013 | Journal Article | IST-REx-ID: 505
Greimel, Katrin, Veronika Perz, Klaus Koren, Roland Feola, Armin Temel, Christian Sohar, Enrique Herrero Acero, Ingo Klimant, and Georg Guebitz. “Banning Toxic Heavy-Metal Catalysts from Paints: Enzymatic Cross-Linking of Alkyd Resins.” Green Chemistry 15, no. 2 (2013): 381–88. https://doi.org/10.1039/c2gc36666e.
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2013 | Journal Article | IST-REx-ID: 507 | OA
Kim, Soo, Zheng Xu, Kyungyoung Song, Dae Kim, Hyangju Kang, Ilka Reichardt, Eun Sohn, Jirí Friml, Gerd Juergens, and Inhwan Hwang. “Adaptor Protein Complex 2-Mediated Endocytosis Is Crucial for Male Reproductive Organ Development in Arabidopsis.” Plant Cell 25, no. 8 (2013): 2970–85. https://doi.org/10.1105/tpc.113.114264.
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