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3935 Publications

2018 | Journal Article | IST-REx-ID: 67 | OA
Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, Nature Ecology and Evolution 2 (2018) 1633–1643.
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2018 | Research Data | IST-REx-ID: 5585 | OA
Data for the paper Evolutionary potential of transcription factors for gene regulatory rewiring
C. Igler, M. Lagator, G. Tkačik, J.P. Bollback, C.C. Guet, (2018).
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2018 | Journal Article | IST-REx-ID: 422 | OA
Relaminarization by steady modification of the streamwise velocity profile in a pipe
J. Kühnen, D. Scarselli, M. Schaner, B. Hof, Flow Turbulence and Combustion 100 (2018) 919–942.
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2018 | Journal Article | IST-REx-ID: 461 | OA
Destabilizing turbulence in pipe flow
J. Kühnen, B. Song, D. Scarselli, N.B. Budanur, M. Riedl, A. Willis, M. Avila, B. Hof, Nature Physics 14 (2018) 386–390.
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2018 | Thesis | IST-REx-ID: 395 | OA
The branched chain amino acids in autism spectrum disorders
D.-C. Tarlungeanu, The Branched Chain Amino Acids in Autism Spectrum Disorders , IST Austria, 2018.
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2018 | Thesis | IST-REx-ID: 10 | OA
Role of genomic imprinting in cerebral cortex development
S. Laukoter, Role of Genomic Imprinting in Cerebral Cortex Development, IST Austria, 2018.
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2018 | Thesis | IST-REx-ID: 6266 | OA
Design and characterization of methods and biological components to realize synthetic neurotransmission
C. Mckenzie, Design and Characterization of Methods and Biological Components to Realize Synthetic Neurotransmission , IST Austria, 2018.
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2018 | Thesis | IST-REx-ID: 50 | OA
Optogenetic Frizzled 7 reveals a permissive function of Wnt/PCP signaling in directed mesenchymal cell migration
D. Capek, Optogenetic Frizzled 7 Reveals a Permissive Function of Wnt/PCP Signaling in Directed Mesenchymal Cell Migration, IST Austria, 2018.
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2018 | Thesis | IST-REx-ID: 26 | OA
The influence of sequence context on the evolution of bacterial gene expression
M. Steinrück, The Influence of Sequence Context on the Evolution of Bacterial Gene Expression, IST Austria, 2018.
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2018 | Journal Article | IST-REx-ID: 449 | OA
WRKY23 is a component of the transcriptional network mediating auxin feedback on PIN polarity
T. Prat, J. Hajny, W. Grunewald, M.K. Vasileva, G. Molnar, R. Tejos, M. Schmid, M. Sauer, J. Friml, PLoS Genetics 14 (2018).
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2018 | Journal Article | IST-REx-ID: 191 | OA
PID/WAG-mediated phosphorylation of the Arabidopsis PIN3 auxin transporter mediates polarity switches during gravitropism
P. Grones, M.F. Abas, J. Hajny, A. Jones, S. Waidmann, J. Kleine Vehn, J. Friml, Scientific Reports 8 (2018).
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2018 | Thesis | IST-REx-ID: 6263 | OA
Genetic determinants of antibiotic resistance evolution
M. Lukacisinova, Genetic Determinants of Antibiotic Resistance Evolution, IST Austria, 2018.
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2018 | Conference Paper | IST-REx-ID: 66 | OA
Ergodic mean-payoff games for the analysis of attacks in crypto-currencies
K. Chatterjee, A.K. Goharshady, R. Ibsen-Jensen, Y. Velner, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2018.
View | Files available | DOI | arXiv
 
2018 | Conference Paper | IST-REx-ID: 6340 | OA
Secure Credit Reporting on the Blockchain
A.K. Goharshady, A. Behrouz, K. Chatterjee, in:, Proceedings of the IEEE International Conference on Blockchain, IEEE, 2018, pp. 1343–1348.
View | Files available | DOI | arXiv
 
2018 | Journal Article | IST-REx-ID: 6009 | OA
Algorithms for algebraic path properties in concurrent systems of constant treewidth components
K. Chatterjee, R. Ibsen-Jensen, A.K. Goharshady, A. Pavlogiannis, ACM Transactions on Programming Languages and Systems 40 (2018).
View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2018 | Conference Paper | IST-REx-ID: 5977 | OA
Computational approaches for stochastic shortest path on succinct MDPs
K. Chatterjee, H. Fu, A.K. Goharshady, N. Okati, in:, Proceedings of the Twenty-Seventh International Joint Conference on Artificial Intelligence, IJCAI, 2018, pp. 4700–4707.
View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2018 | Conference Paper | IST-REx-ID: 311 | OA
Quantitative analysis of smart contracts
K. Chatterjee, A.K. Goharshady, Y. Velner, in:, Springer, 2018, pp. 739–767.
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2017 | Conference Paper | IST-REx-ID: 313 | OA
Experimental evidence for Wigner's tunneling time
N. Camus, E. Yakaboylu, L. Fechner, M. Klaiber, M. Laux, Y. Mi, K. Hatsagortsyan, T. Pfeifer, C. Keitel, R. Moshammer, in:, American Physical Society, 2017.
View | Files available | DOI | arXiv
 
2017 | Conference Paper | IST-REx-ID: 791 | OA
The power of choice in priority scheduling
D.-A. Alistarh, J. Kopinsky, J. Li, G. Nadiradze, in:, Proceedings of the ACM Symposium on Principles of Distributed Computing, ACM, 2017, pp. 283–292.
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2017 | Journal Article | IST-REx-ID: 792 | OA
Relative periodic orbits form the backbone of turbulent pipe flow
N.B. Budanur, K. Short, M. Farazmand, A. Willis, P. Cvitanović, Journal of Fluid Mechanics 833 (2017) 274–301.
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2017 | Journal Article | IST-REx-ID: 793 | OA
On the existence of ordinary triangles
R. Fulek, H. Mojarrad, M. Naszódi, J. Solymosi, S. Stich, M. Szedlák, Computational Geometry: Theory and Applications 66 (2017) 28–31.
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2017 | Journal Article | IST-REx-ID: 794 | OA
C-planarity of embedded cyclic c-graphs
R. Fulek, Computational Geometry: Theory and Applications 66 (2017) 1–13.
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2017 | Journal Article | IST-REx-ID: 795 | OA
Unified Hanani Tutte theorem
R. Fulek, J. Kynčl, D. Pálvölgyi, Electronic Journal of Combinatorics 24 (2017).
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2017 | Journal Article | IST-REx-ID: 796 | OA
Al transmon qubits on silicon on insulator for quantum device integration
A.J. Keller, P. Dieterle, M. Fang, B. Berger, J.M. Fink, O. Painter, Applied Physics Letters 111 (2017).
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2017 | Journal Article | IST-REx-ID: 797
Photonenblockade aufgelöst
J.M. Fink, Physik in Unserer Zeit 48 (2017) 111–113.
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2017 | Journal Article | IST-REx-ID: 798 | OA
Mechanical on chip microwave circulator
S. Barzanjeh, M. Wulf, M. Peruzzo, M. Kalaee, P. Dieterle, O. Painter, J.M. Fink, Nature Communications 8 (2017).
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2017 | Journal Article | IST-REx-ID: 799 | OA
BEN3/BIG2 ARF GEF is involved in brefeldin a-sensitive trafficking at the trans-Golgi network/early endosome in Arabidopsis thaliana
S. Kitakura, M. Adamowski, Y. Matsuura, L. Santuari, H. Kouno, K. Arima, C. Hardtke, J. Friml, T. Kakimoto, H. Tanaka, Plant and Cell Physiology 58 (2017).
View | Files available | DOI | PubMed | Europe PMC
 
2017 | Journal Article | IST-REx-ID: 800 | OA
Distance-dependent inhibition facilitates focality of gamma oscillations in the dentate gyrus
M. Strüber, J. Sauer, P.M. Jonas, M. Bartos, Nature Communications 8 (2017).
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2017 | Journal Article | IST-REx-ID: 803 | OA
DNA cross-bridging shapes a single nucleus from a set of mitotic chromosomes
M. Samwer, M. Schneider, R. Hoefler, P.S. Schmalhorst, J. Jude, J. Zuber, D. Gerlic, Cell 170 (2017) 956–972.
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2017 | Journal Article | IST-REx-ID: 804 | OA
Overcoming the limitations of the MARTINI force field in simulations of polysaccharides
P.S. Schmalhorst, F. Deluweit, R. Scherrers, C.-P.J. Heisenberg, M.K. Sikora, Journal of Chemical Theory and Computation 13 (2017) 5039–5053.
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2017 | Journal Article | IST-REx-ID: 805
The E2A splice variant E47 regulates the differentiation of projection neurons via p57(KIP2) during cortical development
S. Pfurr, Y. Chu, C. Bohrer, F. Greulich, R.J. Beattie, K. Mammadzada, M. Hils, S. Arnold, V. Taylor, K. Schachtrup, N.H. Uhlenhaut, C. Schachtrup, Development 144 (2017) 3917–3931.
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2017 | Journal Article | IST-REx-ID: 807 | OA
Der Springer Compact-Deal – Ein erster Einblick in die Evaluierung einer Offsetting-Vereinbarung
M. Andrae, M. Villányi, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen Und Bibliothekare 70 (2017) 274–280.
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2017 | Thesis | IST-REx-ID: 818 | OA
Timing, variability and cross-protection in bacteria – insights from dynamic gene expression responses to antibiotics
K. Mitosch, Timing, Variability and Cross-Protection in Bacteria – Insights from Dynamic Gene Expression Responses to Antibiotics, IST Austria, 2017.
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2017 | Thesis | IST-REx-ID: 819 | OA
Disease defence in garden ants
C. Pull, Disease Defence in Garden Ants, IST Austria, 2017.
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2017 | Thesis | IST-REx-ID: 820 | OA
The lac operon in the wild
F. Jesse, The Lac Operon in the Wild, IST Austria, 2017.
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2017 | Thesis | IST-REx-ID: 821 | OA
Algorithmic advances in program analysis and their applications
A. Pavlogiannis, Algorithmic Advances in Program Analysis and Their Applications, IST Austria, 2017.
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2017 | Journal Article | IST-REx-ID: 822 | OA
Interaction networks, ecological stability, and collective antibiotic tolerance in polymicrobial infections
M. de Vos, M.P. Zagórski, A. Mcnally, M.T. Bollenbach, PNAS 114 (2017) 10666–10671.
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2017 | Journal Article | IST-REx-ID: 823 | OA
Phase transitions in integer linear problems
S. Colabrese, D. De Martino, L. Leuzzi, E. Marinari, Journal of Statistical Mechanics: Theory and Experiment 2017 (2017).
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2017 | Journal Article | IST-REx-ID: 824 | OA
Heteroclinic path to spatially localized chaos in pipe flow
N.B. Budanur, B. Hof, Journal of Fluid Mechanics 827 (2017).
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2017 | Journal Article | IST-REx-ID: 825 | OA
Metadata for research data in practice
B. Petritsch, Mitteilungen Der Vereinigung Österreichischer Bibliothekarinnen & Bibliothekare 70 (2017) 200–207.
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2017 | Conference Paper | IST-REx-ID: 833 | OA
Streaming algorithm for Euler characteristic curves of multidimensional images
T. Heiss, H. Wagner, in:, M. Felsberg, A. Heyden, N. Krüger (Eds.), Springer, 2017, pp. 397–409.
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2017 | Journal Article | IST-REx-ID: 834 | OA
Thouless energy and multifractality across the many-body localization transition
M. Serbyn, P. Zlatko, D. Abanin, Physical Review B - Condensed Matter and Materials Physics 96 (2017).
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2017 | Conference Paper | IST-REx-ID: 836
Finding eigenvalues of self-maps with the Kronecker canonical form
M. Ethier, G. Jablonski, M. Mrozek, in:, Special Sessions in Applications of Computer Algebra, Springer, 2017, pp. 119–136.
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2017 | Thesis | IST-REx-ID: 837 | OA
Reactivation of the hippocampal cognitive map in goal-directed spatial tasks
H. Xu, Reactivation of the Hippocampal Cognitive Map in Goal-Directed Spatial Tasks, IST Austria, 2017.
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2017 | Thesis | IST-REx-ID: 838 | OA
(The exact security of) Message authentication codes
M. Rybar, (The Exact Security of) Message Authentication Codes, IST Austria, 2017.
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2017 | Thesis | IST-REx-ID: 839 | OA
Brittle fracture simulation with boundary elements for computer graphics
D. Hahn, Brittle Fracture Simulation with Boundary Elements for Computer Graphics, IST Austria, 2017.
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2017 | Book Chapter | IST-REx-ID: 84
Computational topology for structural molecular biology
H. Edelsbrunner, P. Koehl, in:, C. Toth, J. O’Rourke, J. Goodman (Eds.), Handbook of Discrete and Computational Geometry, Third Edition, CRC Press, 2017, pp. 1709–1735.
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2017 | Book Chapter | IST-REx-ID: 444
Structure of respiratory complex I: “Minimal” bacterial and “de luxe” mammalian versions
L.A. Sazanov, in:, M. Wikström (Ed.), Mechanisms of Primary Energy Transduction in Biology , Royal Society of Chemistry, 2017, pp. 25–59.
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2017 | Journal Article | IST-REx-ID: 447 | OA
Fluctuations of the competition interface in presence of shocks
P. Ferrari, P. Nejjar, Revista Latino-Americana de Probabilidade e Estatística 9 (2017) 299–325.
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2017 | Journal Article | IST-REx-ID: 453 | OA
Ensembles of bidirectional kinesin Cin8 produce additive forces in both directions of movement
T. Fallesen, J. Roostalu, C.F. Düllberg, G. Pruessner, T. Surrey, Biophysical Journal 113 (2017) 2055–2067.
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