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3882 Publications
2022 | Journal Article | IST-REx-ID: 11411 | 
Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus
P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, Genetics (2022).
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P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, Genetics (2022).
2022 | Research Data | IST-REx-ID: 11321 |
Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus
P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, (2022).
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P. Surendranadh, L.S. Arathoon, C. Baskett, D. Field, M. Pickup, N.H. Barton, (2022).
2022 | Conference Paper | IST-REx-ID: 11428 |
A cautionary tale: Burning the medial axis is unstable
E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
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E. Chambers, C.D. Fillmore, E.R. Stephenson, M. Wintraecken, in:, X. Goaoc, M. Kerber (Eds.), 38th International Symposium on Computational Geometry, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022, p. 66:1-66:9.
2022 | Journal Article | IST-REx-ID: 10922 |
Worst-case rigidity analysis and optimization for assemblies with mechanical joints
Z. Liu, J. Hu, H. Xu, P. Song, R. Zhang, B. Bickel, C.-W. Fu, Computer Graphics Forum 41 (2022) 507–519.
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Z. Liu, J. Hu, H. Xu, P. Song, R. Zhang, B. Bickel, C.-W. Fu, Computer Graphics Forum 41 (2022) 507–519.
2022 | Journal Article | IST-REx-ID: 11432 |
Coupling 3D liquid simulation with 2D wave propagation for large scale water surface animation using the equivalent sources method
C. Schreck, C. Wojtan, Computer Graphics Forum 41 (2022) 343–353.
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C. Schreck, C. Wojtan, Computer Graphics Forum 41 (2022) 343–353.
2022 | Journal Article | IST-REx-ID: 11435 |
A quantitative Helly-type theorem: Containment in a homothet
G. Ivanov, M. Naszodi, SIAM Journal on Discrete Mathematics 36 (2022) 951–957.
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| arXiv
G. Ivanov, M. Naszodi, SIAM Journal on Discrete Mathematics 36 (2022) 951–957.
2022 | Journal Article | IST-REx-ID: 10335 |
Even maps, the Colin de Verdière number and representations of graphs
V. Kaluza, M. Tancer, Combinatorica (2022).
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| arXiv
V. Kaluza, M. Tancer, Combinatorica (2022).
2022 | Journal Article | IST-REx-ID: 11434
Role of the eastern equatorial Indian Ocean warming in the Indian summer monsoon rainfall trend
B.B. GOSWAMI, Climate Dynamics (2022).
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B.B. GOSWAMI, Climate Dynamics (2022).
2022 | Book Chapter | IST-REx-ID: 11440 |
The persistent homology of dual digital image constructions
B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
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B. Bleile, A. Garin, T. Heiss, K. Maggs, V. Robins, in:, E. Gasparovic, V. Robins, K. Turner (Eds.), Research in Computational Topology 2, 1st ed., Springer Nature, Cham, 2022, pp. 1–26.
2022 | Journal Article | IST-REx-ID: 11444 |
From the prefect’s desk: Gerard van Swieten’s library correspondence
C.A. Chlebak, P.H. Reid, Library and Information History 38 (2022) 23–41.
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C.A. Chlebak, P.H. Reid, Library and Information History 38 (2022) 23–41.
2022 | Journal Article | IST-REx-ID: 11438 |
Laser frequency-offset locking at 10-Hz-level instability using hybrid electronic filters
V. Li, F.R. Diorico, O. Hosten, Physical Review Applied 17 (2022).
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V. Li, F.R. Diorico, O. Hosten, Physical Review Applied 17 (2022).
2022 | Journal Article | IST-REx-ID: 11443
Extension complexity of low-dimensional polytopes
M.A. Kwan, L. Sauermann, Y. Zhao, Transactions of the American Mathematical Society 375 (2022) 4209–4250.
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M.A. Kwan, L. Sauermann, Y. Zhao, Transactions of the American Mathematical Society 375 (2022) 4209–4250.
2022 | Journal Article | IST-REx-ID: 10841 |
Proteomic characterization of isolated Arabidopsis clathrin-coated vesicles reveals evolutionarily conserved and plant-specific components
D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell 34 (2022) 2150–2173.
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| PubMed | Europe PMC
D. Dahhan, G. Reynolds, J. Cárdenas, D. Eeckhout, A.J. Johnson, K. Yperman, W. Kaufmann, N. Vang, X. Yan, I. Hwang, A. Heese, G. De Jaeger, J. Friml, D. Van Damme, J. Pan, S. Bednarek, Plant Cell 34 (2022) 2150–2173.
2022 | Journal Article | IST-REx-ID: 11155 |
Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs
M. Obr, W.J.H. Hagen, R.A. Dick, L. Yu, A. Kotecha, F.K. Schur, Journal of Structural Biology 214 (2022).
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M. Obr, W.J.H. Hagen, R.A. Dick, L. Yu, A. Kotecha, F.K. Schur, Journal of Structural Biology 214 (2022).
2022 | Journal Article | IST-REx-ID: 10016 |
Fourteen stations of auxin
J. Friml, Cold Spring Harbor Perspectives in Biology 14 (2022).
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J. Friml, Cold Spring Harbor Perspectives in Biology 14 (2022).
2022 | Journal Article | IST-REx-ID: 11451 |
The chemistry of Cu3 N and Cu3 PdN nanocrystals
M. Parvizian, A. Duràn Balsa, R. Pokratath, C. Kalha, S. Lee, D. Van Den Eynden, M. Ibáñez, A. Regoutz, J. De Roo, Angewandte Chemie - International Edition (2022).
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M. Parvizian, A. Duràn Balsa, R. Pokratath, C. Kalha, S. Lee, D. Van Den Eynden, M. Ibáñez, A. Regoutz, J. De Roo, Angewandte Chemie - International Edition (2022).
2022 | Journal Article | IST-REx-ID: 11449
Simultaneous brain cell type and lineage determined by scRNA-seq reveals stereotyped cortical development
D.J. Anderson, F. Pauler, A. Mckenna, J. Shendure, S. Hippenmeyer, M.S. Horwitz, Cell Systems 13 (2022) 438–453.e5.
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| PubMed | Europe PMC
D.J. Anderson, F. Pauler, A. Mckenna, J. Shendure, S. Hippenmeyer, M.S. Horwitz, Cell Systems 13 (2022) 438–453.e5.
2022 | Journal Article | IST-REx-ID: 10548 |
Scaling limit of the homogenization commutator for Gaussian coefficient fields
M. Duerinckx, J.L. Fischer, A. Gloria, Annals of Applied Probability 32 (2022) 1179–1209.
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M. Duerinckx, J.L. Fischer, A. Gloria, Annals of Applied Probability 32 (2022) 1179–1209.
2022 | Journal Article | IST-REx-ID: 11448 |
Heterogeneity of the GFP fitness landscape and data-driven protein design
L. Gonzalez Somermeyer, A. Fleiss, A.S. Mishin, N.G. Bozhanova, A.A. Igolkina, J. Meiler, M.-E. Alaball Pujol, E.V. Putintseva, K.S. Sarkisyan, F. Kondrashov, ELife 11 (2022).
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L. Gonzalez Somermeyer, A. Fleiss, A.S. Mishin, N.G. Bozhanova, A.A. Igolkina, J. Meiler, M.-E. Alaball Pujol, E.V. Putintseva, K.S. Sarkisyan, F. Kondrashov, ELife 11 (2022).
2022 | Journal Article | IST-REx-ID: 11447 |
Relation between the number of peaks and the number of reciprocal sign epistatic interactions
R.J. Saona Urmeneta, F. Kondrashov, K. Khudiakova, Bulletin of Mathematical Biology 84 (2022).
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R.J. Saona Urmeneta, F. Kondrashov, K. Khudiakova, Bulletin of Mathematical Biology 84 (2022).
2022 | Book Chapter | IST-REx-ID: 11456
Proteomic Analysis of C. Elegans Neurons Using TurboID-Based Proximity Labeling
M. Artan, M. de Bono, in:, D. Yamamoto (Ed.), Behavioral Neurogenetics, Springer Nature, New York, 2022, pp. 277–294.
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M. Artan, M. de Bono, in:, D. Yamamoto (Ed.), Behavioral Neurogenetics, Springer Nature, New York, 2022, pp. 277–294.
2022 | Journal Article | IST-REx-ID: 11460 |
WDFY3 mutation alters laminar position and morphology of cortical neurons
Z.A. Schaaf, L. Tat, N. Cannizzaro, R. Green, T. Rülicke, S. Hippenmeyer, K.S. Zarbalis, Molecular Autism 13 (2022).
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Z.A. Schaaf, L. Tat, N. Cannizzaro, R. Green, T. Rülicke, S. Hippenmeyer, K.S. Zarbalis, Molecular Autism 13 (2022).
2022 | Journal Article | IST-REx-ID: 11462
Combining of synthetic VHH and immune scFv libraries for pregnancy-associated glycoproteins ELISA development
D. Dormeshkin, M. Shapira, A. Karputs, A. Kavaleuski, I. Kuzminski, E. Stepanova, A. Gilep, Applied Microbiology and Biotechnology (2022).
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| PubMed | Europe PMC
D. Dormeshkin, M. Shapira, A. Karputs, A. Kavaleuski, I. Kuzminski, E. Stepanova, A. Gilep, Applied Microbiology and Biotechnology (2022).
2022 | Conference Paper | IST-REx-ID: 11459 |
Differential cost analysis with simultaneous potentials and anti-potentials
D. Zikelic, B.-Y.E. Chang, P. Bolignano, F. Raimondi, in:, Proceedings of the 43rd ACM SIGPLAN International Conference on Programming Language Design and Implementation, Association for Computing Machinery, 2022, pp. 442–457.
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| arXiv
D. Zikelic, B.-Y.E. Chang, P. Bolignano, F. Raimondi, in:, Proceedings of the 43rd ACM SIGPLAN International Conference on Programming Language Design and Implementation, Association for Computing Machinery, 2022, pp. 442–457.
2022 | Journal Article | IST-REx-ID: 11442 |
Closed-loop control of direct ink writing via reinforcement learning
M. Piovarci, M. Foshey, J. Xu, T. Erps, V. Babaei, P. Didyk, S. Rusinkiewicz, W. Matusik, B. Bickel, ACM Transactions on Graphics 41 (n.d.).
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| arXiv
M. Piovarci, M. Foshey, J. Xu, T. Erps, V. Babaei, P. Didyk, S. Rusinkiewicz, W. Matusik, B. Bickel, ACM Transactions on Graphics 41 (n.d.).
2022 | Journal Article | IST-REx-ID: 11471 |
Avoiding barren plateaus using classical shadows
S. Sack, R.A. Medina Ramos, A. Michailidis, R. Kueng, M. Serbyn, PRX Quantum 3 (2022).
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| DOI
| arXiv
S. Sack, R.A. Medina Ramos, A. Michailidis, R. Kueng, M. Serbyn, PRX Quantum 3 (2022).
2022 | Journal Article | IST-REx-ID: 11469 |
Localization of a mobile impurity interacting with an Anderson insulator
P. Brighi, A. Michailidis, K. Kirova, D.A. Abanin, M. Serbyn, Physical Review B 105 (2022).
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| arXiv
P. Brighi, A. Michailidis, K. Kirova, D.A. Abanin, M. Serbyn, Physical Review B 105 (2022).
2022 | Journal Article | IST-REx-ID: 11470 |
Propagation of many-body localization in an Anderson insulator
P. Brighi, A.A. Michailidis, D.A. Abanin, M. Serbyn, Physical Review B 105 (2022).
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| arXiv
P. Brighi, A.A. Michailidis, D.A. Abanin, M. Serbyn, Physical Review B 105 (2022).
2022 | Conference Paper | IST-REx-ID: 11476 |
CoCoA: Concurrent continuous group key agreement
J. Alwen, B. Auerbach, M. Cueto Noval, K. Klein, G. Pascual Perez, K.Z. Pietrzak, M. Walter, in:, Advances in Cryptology – EUROCRYPT 2022, Springer Nature, Cham, 2022, pp. 815–844.
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J. Alwen, B. Auerbach, M. Cueto Noval, K. Klein, G. Pascual Perez, K.Z. Pietrzak, M. Walter, in:, Advances in Cryptology – EUROCRYPT 2022, Springer Nature, Cham, 2022, pp. 815–844.
2022 | Journal Article | IST-REx-ID: 10564 |
Polaron models with regular interactions at strong coupling
K. Mysliwy, R. Seiringer, Journal of Statistical Physics 186 (2022).
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| arXiv
K. Mysliwy, R. Seiringer, Journal of Statistical Physics 186 (2022).
2021 | Journal Article | IST-REx-ID: 7900 |
Bosonic collective excitations in Fermi gases
N.P. Benedikter, Reviews in Mathematical Physics 33 (2021).
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| arXiv
N.P. Benedikter, Reviews in Mathematical Physics 33 (2021).
2021 | Book Chapter | IST-REx-ID: 7941
Simple multi-color super-resolution by X10 microscopy
S.M. Truckenbrodt, S.O. Rizzoli, in:, Methods in Cell Biology, Elsevier, 2021, pp. 33–56.
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| PubMed | Europe PMC
S.M. Truckenbrodt, S.O. Rizzoli, in:, Methods in Cell Biology, Elsevier, 2021, pp. 33–56.
2021 | Journal Article | IST-REx-ID: 8198 |
Impact of drive harmonics on the stability of Floquet many-body localization
A.A. Diringer, T. Gulden, Physical Review B 103 (2021).
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| arXiv
A.A. Diringer, T. Gulden, Physical Review B 103 (2021).
2021 | Journal Article | IST-REx-ID: 8253 |
The remarkable robustness of surrogate gradient learning for instilling complex function in spiking neural networks
F. Zenke, T.P. Vogels, Neural Computation 33 (2021) 899–925.
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| PubMed | Europe PMC
F. Zenke, T.P. Vogels, Neural Computation 33 (2021) 899–925.
2021 | Journal Article | IST-REx-ID: 8286 |
Dynamic averaging load balancing on cycles
D.-A. Alistarh, G. Nadiradze, A. Sabour, Algorithmica (2021).
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| arXiv
D.-A. Alistarh, G. Nadiradze, A. Sabour, Algorithmica (2021).
2021 | Journal Article | IST-REx-ID: 8317 |
Folding polyominoes with holes into a cube
O. Aichholzer, H.A. Akitaya, K.C. Cheung, E.D. Demaine, M.L. Demaine, S.P. Fekete, L. Kleist, I. Kostitsyna, M. Löffler, Z. Masárová, K. Mundilova, C. Schmidt, Computational Geometry: Theory and Applications 93 (2021).
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| arXiv
O. Aichholzer, H.A. Akitaya, K.C. Cheung, E.D. Demaine, M.L. Demaine, S.P. Fekete, L. Kleist, I. Kostitsyna, M. Löffler, Z. Masárová, K. Mundilova, C. Schmidt, Computational Geometry: Theory and Applications 93 (2021).
2021 | Journal Article | IST-REx-ID: 8373 |
A divergence center interpretation of general symmetric Kubo-Ando means, and related weighted multivariate operator means
J. Pitrik, D. Virosztek, Linear Algebra and Its Applications 609 (2021) 203–217.
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| arXiv
J. Pitrik, D. Virosztek, Linear Algebra and Its Applications 609 (2021) 203–217.
2021 | Journal Article | IST-REx-ID: 8430 |
Genomic architecture and prediction of censored time-to-event phenotypes with a Bayesian genome-wide analysis
S.E. Ojavee, A. Kousathanas, D. Trejo Banos, E.J. Orliac, M. Patxot, K. Lall, R. Magi, K. Fischer, Z. Kutalik, M.R. Robinson, Nature Communications 12 (2021).
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S.E. Ojavee, A. Kousathanas, D. Trejo Banos, E.J. Orliac, M. Patxot, K. Lall, R. Magi, K. Fischer, Z. Kutalik, M.R. Robinson, Nature Communications 12 (2021).
2021 | Journal Article | IST-REx-ID: 8544 |
GluD2- and Cbln1-mediated competitive synaptogenesis shapes the dendritic arbors of cerebellar Purkinje cells
Y.H. Takeo, S.A. Shuster, L. Jiang, M. Hu, D.J. Luginbuhl, T. Rülicke, X. Contreras, S. Hippenmeyer, M.J. Wagner, S. Ganguli, L. Luo, Neuron 109 (2021) P629–644.E8.
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Y.H. Takeo, S.A. Shuster, L. Jiang, M. Hu, D.J. Luginbuhl, T. Rülicke, X. Contreras, S. Hippenmeyer, M.J. Wagner, S. Ganguli, L. Luo, Neuron 109 (2021) P629–644.E8.
2021 | Journal Article | IST-REx-ID: 8546 |
Generation of excitatory and inhibitory neurons from common progenitors via Notch signaling in the cerebellum
T. Zhang, T. Liu, N. Mora, J. Guegan, M. Bertrand, X. Contreras, A.H. Hansen, C. Streicher, M. Anderle, N. Danda, L. Tiberi, S. Hippenmeyer, B.A. Hassan, Cell Reports 35 (2021).
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| PubMed | Europe PMC
T. Zhang, T. Liu, N. Mora, J. Guegan, M. Bertrand, X. Contreras, A.H. Hansen, C. Streicher, M. Anderle, N. Danda, L. Tiberi, S. Hippenmeyer, B.A. Hassan, Cell Reports 35 (2021).
2021 | Journal Article | IST-REx-ID: 8582 |
Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana
H. Li, D. von Wangenheim, X. Zhang, S. Tan, N. Darwish-Miranda, S. Naramoto, K.T. Wabnik, R. de Rycke, W. Kaufmann, D.J. Gütl, R. Tejos, P. Grones, M. Ke, X. Chen, J. Dettmer, J. Friml, New Phytologist 229 (2021) 351–369.
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H. Li, D. von Wangenheim, X. Zhang, S. Tan, N. Darwish-Miranda, S. Naramoto, K.T. Wabnik, R. de Rycke, W. Kaufmann, D.J. Gütl, R. Tejos, P. Grones, M. Ke, X. Chen, J. Dettmer, J. Friml, New Phytologist 229 (2021) 351–369.
2021 | Journal Article | IST-REx-ID: 8602 |
Theory of mechanochemical patterning and optimal migration in cell monolayers
D.R. Boocock, N. Hino, N. Ruzickova, T. Hirashima, E.B. Hannezo, Nature Physics 17 (2021) 267–274.
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D.R. Boocock, N. Hino, N. Ruzickova, T. Hirashima, E.B. Hannezo, Nature Physics 17 (2021) 267–274.
2021 | Journal Article | IST-REx-ID: 8603 |
Quantum corrections to the Pekar asymptotics of a strongly coupled polaron
R. Frank, R. Seiringer, Communications on Pure and Applied Mathematics 74 (2021) 544–588.
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R. Frank, R. Seiringer, Communications on Pure and Applied Mathematics 74 (2021) 544–588.
2021 | Journal Article | IST-REx-ID: 8606 |
GhARF16-1 modulates leaf development by transcriptionally regulating the GhKNOX2-1 gene in cotton
P. He, Y. Zhang, H. Li, X. Fu, H. Shang, C. Zou, J. Friml, G. Xiao, Plant Biotechnology Journal 19 (2021) 548–562.
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| PubMed | Europe PMC
P. He, Y. Zhang, H. Li, X. Fu, H. Shang, C. Zou, J. Friml, G. Xiao, Plant Biotechnology Journal 19 (2021) 548–562.
2021 | Journal Article | IST-REx-ID: 8608 |
Salicylic acid regulates PIN2 auxin transporter hyper-clustering and root gravitropic growth via Remorin-dependent lipid nanodomain organization in Arabidopsis thaliana
M. Ke, Z. Ma, D. Wang, Y. Sun, C. Wen, D. Huang, Z. Chen, L. Yang, S. Tan, R. Li, J. Friml, Y. Miao, X. Chen, New Phytologist 229 (2021) 963–978.
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| PubMed | Europe PMC
M. Ke, Z. Ma, D. Wang, Y. Sun, C. Wen, D. Huang, Z. Chen, L. Yang, S. Tan, R. Li, J. Friml, Y. Miao, X. Chen, New Phytologist 229 (2021) 963–978.
2021 | Journal Article | IST-REx-ID: 6965 |
The positivity of local equivariant Hirzebruch class for toric varieties
K.P. Rychlewicz, Bulletin of the London Mathematical Society 53 (2021) 560–574.
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| arXiv
K.P. Rychlewicz, Bulletin of the London Mathematical Society 53 (2021) 560–574.
2021 | Technical Report | IST-REx-ID: 6995 |
Identification of neural oscillations and epileptiform changes in human brain organoids
R.A. Samarasinghe, O. Miranda, J.E. Buth, S. Mitchell, I. Ferando, M. Watanabe, A. Kurdian, P. Golshani, K. Plath, W.E. Lowry, J.M. Parent, I. Mody, B.G. Novitch, Identification of Neural Oscillations and Epileptiform Changes in Human Brain Organoids, Springer Nature, 2021.
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| PubMed | Europe PMC
R.A. Samarasinghe, O. Miranda, J.E. Buth, S. Mitchell, I. Ferando, M. Watanabe, A. Kurdian, P. Golshani, K. Plath, W.E. Lowry, J.M. Parent, I. Mody, B.G. Novitch, Identification of Neural Oscillations and Epileptiform Changes in Human Brain Organoids, Springer Nature, 2021.
2021 | Journal Article | IST-REx-ID: 7463 |
Long-range temporal correlations in the broadband resting state activity of the human brain revealed by neuronal avalanches
F. Lombardi, O. Shriki, H.J. Herrmann, L. de Arcangelis, Neurocomputing 461 (2021) 657–666.
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F. Lombardi, O. Shriki, H.J. Herrmann, L. de Arcangelis, Neurocomputing 461 (2021) 657–666.
2021 | Journal Article | IST-REx-ID: 7551 |
Ventro-dorsal hippocampal pathway gates novelty-induced contextual memory formation
F.A. Fredes Tolorza, M.A. Silva Sifuentes, P. Koppensteiner, K. Kobayashi, M.A. Jösch, R. Shigemoto, Current Biology 31 (2021) P25–38.E5.
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F.A. Fredes Tolorza, M.A. Silva Sifuentes, P. Koppensteiner, K. Kobayashi, M.A. Jösch, R. Shigemoto, Current Biology 31 (2021) P25–38.E5.
2021 | Journal Article | IST-REx-ID: 7553 |
Statistical analysis and optimality of neural systems
W.F. Mlynarski, M. Hledik, T.R. Sokolowski, G. Tkačik, Neuron 109 (2021) 1227–1241.e5.
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W.F. Mlynarski, M. Hledik, T.R. Sokolowski, G. Tkačik, Neuron 109 (2021) 1227–1241.e5.