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2400 Publications

2010 | Thesis | IST-REx-ID: 3962
H. Pflicke,   Dendritic cell migration across basement membranes in the skin. IST Austria, 2010.
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2010 | Conference Paper | IST-REx-ID: 4369   OA
D. Nickovic and N. Piterman, “From MTL to deterministic timed automata,” presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria, 2010, vol. 6246, pp. 152–167.
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2010 | Journal Article | IST-REx-ID: 474
N. H. Barton, J. Kelleher, and A. Etheridge, “A new model for extinction and recolonization in two dimensions: Quantifying phylogeography,” Evolution, vol. 64, no. 9, pp. 2701–2715, 2010.
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2010 | Conference Paper | IST-REx-ID: 4388
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, “GIST: A solver for probabilistic games,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 665–669.
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2010 | Conference Paper | IST-REx-ID: 4390
P. Cerny, A. Radhakrishna, D. Zufferey, S. Chaudhuri, and R. Alur, “Model checking of linearizability of concurrent list implementations,” presented at the CAV: Computer Aided Verification, Edinburgh, UK, 2010, vol. 6174, pp. 465–479.
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2010 | Conference (Editor) | IST-REx-ID: 3859
K. Chatterjee and T. A. Henzinger, Eds., Formal modeling and analysis of timed systems, vol. 6246. Springer, 2010.
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2010 | Journal Article | IST-REx-ID: 3789
E. Quesada-Hernández et al., “Stereotypical cell division orientation controls neural rod midline formation in zebrafish,” Current Biology, vol. 20, no. 21, pp. 1966–1972, 2010.
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2010 | Journal Article | IST-REx-ID: 3773   OA
N. H. Barton, “What role does natural selection play in speciation?,” Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, vol. 365, no. 1547, pp. 1825–1840, 2010.
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2010 | Journal Article | IST-REx-ID: 3785
F. Palero, P. Abello, E. Macpherson, C. Matthee, and M. Pascual, “Genetic diversity levels in fishery-exploited spiny lobsters of the Genus Palinurus (Decapoda: Achelata),” Journal of Crustacean Biology, vol. 30, no. 4, pp. 658–663, 2010.
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2010 | Conference Paper | IST-REx-ID: 3848
P. Bendich, H. Edelsbrunner, D. Morozov, and A. Patel, “The robustness of level sets,” presented at the ESA: European Symposium on Algorithms, Liverpool, UK, 2010, vol. 6346, pp. 1–10.
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2010 | Conference Paper | IST-REx-ID: 3850
E. Berberich, D. Halperin, M. Kerber, and R. Pogalnikova, “Polygonal reconstruction from approximate offsets,” presented at the EuroCG: European Workshop on Computational Geometry, Dortmund, Germany, 2010, pp. 12–23.
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2010 | Journal Article | IST-REx-ID: 3901   OA
P. Bendich, H. Edelsbrunner, and M. Kerber, “Computing robustness and persistence for images,” IEEE Transactions of Visualization and Computer Graphics, vol. 16, no. 6, pp. 1251–1260, 2010.
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2010 | Book | IST-REx-ID: 4346   OA
P. Danowski and J. Bergmann, Handbuch Bibliothek 2.0. De Gruyter, 2010.
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2010 | Book Chapter | IST-REx-ID: 4339   OA
J. Bergmann and P. Danowski, “Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch,” in Handbuch Bibliothek 2.0, J. Bergmann and P. Danowski, Eds. De Gruyter, 2010, pp. 5–20.
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2010 | Conference Paper | IST-REx-ID: 4396   OA
D. Beyer, T. A. Henzinger, G. Théoduloz, and D. Zufferey, “Shape refinement through explicit heap analysis,” presented at the FASE: Fundamental Approaches To Software Engineering, Paphos, Cyprus, 2010, vol. 6013, pp. 263–277.
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2010 | Conference Paper | IST-REx-ID: 4389   OA
L. Doyen, T. A. Henzinger, A. Legay, and D. Nickovic, “Robustness of sequential circuits,” presented at the ACSD: Application of Concurrency to System Design, 2010, pp. 77–84.
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2010 | Journal Article | IST-REx-ID: 533
J. Hoenicke, K. Leino, A. Podelski, M. Schäf, and T. Wies, “Doomed program points,” Formal Methods in System Design, vol. 37, no. 2–3, pp. 171–199, 2010.
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2010 | Conference Paper | IST-REx-ID: 3855
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Qualitative analysis of partially-observable Markov Decision Processes,” presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic, 2010, vol. 6281, pp. 258–269.
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2010 | Journal Article | IST-REx-ID: 3867
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Expressiveness and closure properties for quantitative languages,” Logical Methods in Computer Science, vol. 6, no. 3, pp. 1–23, 2010.
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2010 | Journal Article | IST-REx-ID: 2409   OA
A. Kupczok, H. Schmidt, and A. Von Haeseler, “Accuracy of phylogeny reconstruction methods combining overlapping gene data sets ,” Algorithms for Molecular Biology, vol. 5, no. 1, p. 37, 2010.
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2010 | Journal Article | IST-REx-ID: 3774
H. Senn, G. Swanson, S. Goodman, N. H. Barton, and J. Pemberton, “Phenotypic correlates of hybridisation between red and sika deer (genus Cervus),” Journal of Animal Ecology, vol. 79, no. 2, pp. 414–425, 2010.
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2010 | Journal Article | IST-REx-ID: 3779   OA
U. Rosas, N. H. Barton, L. Copsey, P. Barbier De Reuille, and E. Coen, “Cryptic variation between species and the basis of hybrid performance,” PLoS Biology, vol. 8, no. 7, p. e1000429, 2010.
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2010 | Conference Paper | IST-REx-ID: 3793
S. Nowozin, P. Gehler, and C. Lampert, “On parameter learning in CRF-based approaches to object class image segmentation,” presented at the ECCV: European Conference on Computer Vision, Heraklion, Crete, Greece, 2010, vol. 6316, pp. 98–111.
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2010 | Journal Article | IST-REx-ID: 3604
H. Senn, S. Goodman, G. Swanson, N. H. Barton, and J. Pemberton, “Investigating temporal changes in hybridisation and introgression between invasive sika (Cervus nippon) and native red deer (Cervus elaphus) on the Kintyre Peninsula, Scotland,” Molecular Ecology, vol. 19, no. 5, pp. 910–924, 2010.
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2010 | Conference Paper | IST-REx-ID: 3849   OA
P. Bendich, H. Edelsbrunner, M. Kerber, and A. Patel, “Persistent homology under non-uniform error,” presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic, 2010, vol. 6281, pp. 12–23.
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2010 | Conference Paper | IST-REx-ID: 3856   OA
K. Chatterjee, L. Doyen, H. Gimbert, and T. A. Henzinger, “Randomness for free,” presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic, 2010, vol. 6281, pp. 246–257.
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2010 | Journal Article | IST-REx-ID: 3868   OA
K. Chatterjee, L. De Alfaro, R. Majumdar, and V. Raman, “Algorithms for game metrics,” Logical Methods in Computer Science, vol. 6, no. 3, pp. 1–27, 2010.
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2010 | Journal Article | IST-REx-ID: 3863
D. Berwanger, K. Chatterjee, M. De Wulf, L. Doyen, and T. A. Henzinger, “Strategy construction for parity games with imperfect information,” Information and Computation, vol. 208, no. 10, pp. 1206–1220, 2010.
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2010 | Conference Paper | IST-REx-ID: 4378   OA
V. Kuncak, R. Piskac, P. Suter, and T. Wies, “Building a calculus of data structures,” presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain, 2010, vol. 5944, pp. 26–44.
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2010 | Book Chapter | IST-REx-ID: 4392
P. Cerny, T. A. Henzinger, and A. Radhakrishna, “Quantitative Simulation Games,” in Time For Verification: Essays in Memory of Amir Pnueli, vol. 6200, Z. Manna and D. Peled, Eds. Springer, 2010, pp. 42–60.
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2010 | Conference Paper | IST-REx-ID: 488   OA
R. Alur and P. Cerny, “Expressiveness of streaming string transducers,” presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India, 2010, vol. 8, pp. 1–12.
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2010 | Technical Report | IST-REx-ID: 5388   OA
K. Chatterjee, P. Cerny, T. A. Henzinger, A. Radhakrishna, and R. Singh, Quantitative synthesis for concurrent programs. IST Austria, 2010.
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2010 | Technical Report | IST-REx-ID: 5390   OA
K. Chatterjee and N. Fijalkow, Topological, automata-theoretic and logical characterization of finitary languages. IST Austria, 2010.
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2010 | Conference Paper | IST-REx-ID: 4361
T. Wies, D. Zufferey, and T. A. Henzinger, “Forward analysis of depth-bounded processes,” presented at the FoSSaCS: Foundations of Software Science and Computation Structures, Paphos, Cyprus, 2010, vol. 6014, pp. 94–108.
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2010 | Conference Paper | IST-REx-ID: 4380   OA
T. A. Henzinger, A. Tomar, V. Singh, T. Wies, and D. Zufferey, “A marketplace for cloud resources,” presented at the EMSOFT: Embedded Software , Arizona, USA, 2010, pp. 1–8.
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2010 | Journal Article | IST-REx-ID: 3832   OA
J. Guzmán and P. M. Jonas, “Beyond TARPs: The growing list of auxiliary AMPAR subunits,” Neuron, vol. 66, no. 1, pp. 8–10, 2010.
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2010 | Journal Article | IST-REx-ID: 4157   OA
E. Papusheva and C.-P. J. Heisenberg, “Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis,” EMBO Journal, vol. 29, no. 16, pp. 2753–2768, 2010.
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2010 | Conference Paper | IST-REx-ID: 3851
K. Chatterjee and L. Doyen, “Energy parity games,” presented at the ICALP: Automata, Languages and Programming, 37th International Colloquium, Bordeaux, France, 2010, vol. 6199, pp. 599–610.
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2009 | Journal Article | IST-REx-ID: 3775   OA
N. H. Barton and J. Coe, “On the application of statistical physics to evolutionary biology,” Journal of Theoretical Biology, vol. 259, no. 2, pp. 317–324, 2009.
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2009 | Conference Paper | IST-REx-ID: 3871   OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Probabilistic weighted automata,” presented at the CONCUR: Concurrency Theory, Bologna, Italy, 2009, vol. 5710, pp. 244–258.
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2009 | Journal Article | IST-REx-ID: 4242   OA
N. H. Barton and M. De Cara, “The evolution of strong reproductive isolation,” Evolution; International Journal of Organic Evolution, vol. 63, no. 5, pp. 1171–1190, 2009.
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2009 | Conference Paper | IST-REx-ID: 4545   OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “A survey of stochastic games with limsup and liminf objectives,” presented at the ICALP: Automata, Languages and Programming, Rhodos, Greece, 2009, vol. 5556, pp. 1–15.
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2009 | Conference Paper | IST-REx-ID: 4569   OA
R. Bloem, K. Chatterjee, T. A. Henzinger, and B. Jobstmann, “Better quality in synthesis through quantitative objectives,” presented at the CAV: Computer Aided Verification, Grenoble, France, 2009, vol. 5643, pp. 140–156.
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2009 | Book Chapter | IST-REx-ID: 3675
N. H. Barton, “Why sex and recombination? ,” in Cold Spring Harbor Symposia on Quantitative Biology, vol. 74, Cold Spring Harbor Laboratory Press, 2009, pp. 187–195.
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2009 | Conference Paper | IST-REx-ID: 3841   OA
T. A. Henzinger, B. Jobstmann, and V. Wolf, “Formalisms for specifying Markovian population models,” presented at the RP: Reachability Problems, Palaiseau, France, 2009, vol. 5797, pp. 3–23.
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2009 | Journal Article | IST-REx-ID: 4231
N. H. Barton and H. De Vladar, “Statistical mechanics and the evolution of polygenic quantitative traits,” Genetics, vol. 181, no. 3, pp. 997–1011, 2009.
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2009 | Technical Report | IST-REx-ID: 5392   OA
K. Chatterjee, Probabilistic automata on infinite words: Decidability and undecidability results. IST Austria, 2009.
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2009 | Conference Paper | IST-REx-ID: 4542   OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, “Alternating weighted automata,” presented at the FCT: Fundamentals of Computation Theory, Wroclaw, Poland, 2009, vol. 5699, pp. 3–13.
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2009 | Journal Article | IST-REx-ID: 4136
J. Polechova, N. H. Barton, and G. Marion, “Species’ range: Adaptation in space and time,” American Naturalist, vol. 174, no. 5, pp. E186–E204, 2009.
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2009 | Technical Report | IST-REx-ID: 5393   OA
K. Chatterjee, T. A. Henzinger, B. Jobstmann, and A. Radhakrishna, Gist: A solver for probabilistic games. IST Austria, 2009.
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2009 | Journal Article | IST-REx-ID: 3780   OA
A. Davison, N. H. Barton, and B. Clarke, “The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails,” Journal of Evolutionary Biology, vol. 22, no. 8, pp. 1624–1635, 2009.
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2009 | Conference Paper | IST-REx-ID: 3843
F. Didier, T. A. Henzinger, M. Mateescu, and V. Wolf, “Fast adaptive uniformization of the chemical master equation,” presented at the HIBI: High-Performance Computational Systems Biology, Trento, Italy, 2009, vol. 4, no. 6, pp. 118–127.
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2009 | Conference Paper | IST-REx-ID: 3968   OA
H. Edelsbrunner and J. Harer, “The persistent Morse complex segmentation of a 3-manifold,” presented at the 3DPH: Modelling the Physiological Human, Zermatt, Switzerland, 2009, vol. 5903, pp. 36–50.
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2009 | Conference Paper | IST-REx-ID: 4543
K. Chatterjee, T. A. Henzinger, and F. Horn, “Stochastic games with finitary objectives,” presented at the MFCS: Mathematical Foundations of Computer Science, High Tatras, Slovakia, 2009, vol. 5734, pp. 34–54.
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2009 | Technical Report | IST-REx-ID: 5394   OA
K. Chatterjee, T. A. Henzinger, and F. Horn, Improved lower bounds for request-response and finitary Streett games. IST Austria, 2009.
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2009 | Conference Paper | IST-REx-ID: 3837   OA
S. Tripakis, B. Lickly, T. A. Henzinger, and E. Lee, “On relational interfaces,” in EMSOFT ’09 Proceedings of the seventh ACM international conference on Embedded software, Grenoble, France, 2009, pp. 67–76.
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2009 | Conference Paper | IST-REx-ID: 3844   OA
T. A. Henzinger, C. Kirsch, E. Marques, and A. Sokolova, “Distributed, modular HTL,” presented at the RTSS: Real-Time Systems Symposium, Washington, DC, United States, 2009, pp. 171–180.
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2009 | Journal Article | IST-REx-ID: 3870   OA
K. Chatterjee, T. A. Henzinger, and F. Horn, “Finitary winning in omega-regular games,” ACM Transactions on Computational Logic (TOCL), vol. 11, no. 1, 2009.
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2009 | Technical Report | IST-REx-ID: 5395   OA
K. Chatterjee, L. Doyen, and T. A. Henzinger, Qualitative analysis of partially-observable Markov decision processes. IST Austria, 2009.
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2008 | Journal Article | IST-REx-ID: 517
N. H. Barton, “Identity and coalescence in structured populations: A commentary on ‘Inbreeding coefficients and coalescence times’ by Montgomery Slatkin,” Genetical Research, vol. 89, no. 5–6, pp. 475–477, 2008.
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