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2428 Publications

2010 | Conference Paper | IST-REx-ID: 4362
Singh V. Runtime verification for software transactional memories. In: Sokolsky O, Rosu G, Tilmann N, et al., eds. Vol 6418. Springer; 2010:421-435. doi:10.1007/978-3-642-16612-9_32
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2010 | Conference Paper | IST-REx-ID: 489   OA
Cristau J, David C, Horn F. How do we remember the past in randomised strategies? . In: Proceedings of GandALF 2010. Vol 25. Open Publishing Association; 2010:30-39. doi:10.4204/EPTCS.25.7
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2010 | Conference Paper | IST-REx-ID: 4393
Cerny P, Henzinger TA, Radhakrishna A. Simulation distances. In: Vol 6269. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:235-268. doi:10.1007/978-3-642-15375-4_18
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2010 | Technical Report | IST-REx-ID: 5389   OA
Cerny P, Henzinger TA, Radhakrishna A. Simulation Distances. IST Austria; 2010. doi:10.15479/AT:IST-2010-0003
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2010 | Conference Paper | IST-REx-ID: 3857
Chatterjee K, Henzinger TA. Probabilistic Automata on infinite words: decidability and undecidability results. In: Vol 6252. Springer; 2010:1-16. doi:10.1007/978-3-642-15643-4_1
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2010 | Technical Report | IST-REx-ID: 5391   OA
Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model Checking of Linearizability of Concurrent List Implementations. IST Austria; 2010. doi:10.15479/AT:IST-2010-0001
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2010 | Journal Article | IST-REx-ID: 3303   OA
Weissman D, Feldman M, Fisher D. The rate of fitness-valley crossing in sexual populations. Genetics. 2010;186(4):1389-1410. doi:10.1534/genetics.110.123240
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2010 | Conference Paper | IST-REx-ID: 3719   OA
Feret J, Henzinger TA, Koeppl H, Petrov T. Lumpability abstractions of rule-based systems. In: Vol 40. Open Publishing Association; 2010:142-161.
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2010 | Journal Article | IST-REx-ID: 3776   OA
Barton NH. Genetic linkage and natural selection. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1552):2559-2569. doi:10.1098/rstb.2010.0106
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2010 | Journal Article | IST-REx-ID: 3783
Palero F, González Candelas F, Pascual M. Microsatelight – Pipeline to expedite microsatellite analysis. Journal of Heredity. 2010;102(2):247-249. doi:10.1093/jhered/esq111
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2010 | Journal Article | IST-REx-ID: 3788
Klopper A, Krens G, Grill S, Heisenberg C-PJ. Finite-size corrections to scaling behavior in sorted cell aggregates. The European Physical Journal E: Soft Matter and Biological Physics. 2010;33(2):99-103. doi:10.1140/epje/i2010-10642-y
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2010 | Journal Article | IST-REx-ID: 3790   OA
Diz Muñoz A, Krieg M, Bergert M, et al. Control of directed cell migration in vivo by membrane-to-cortex attachment. PLoS Biology. 2010;8(11):e1000544. doi:10.1371/journal.pbio.1000544
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2010 | Book Chapter | IST-REx-ID: 3795   OA
Edelsbrunner H, Morozov D, Patel A. The stability of the apparent contour of an orientable 2-manifold. In: Topological Data Analysis and Visualization: Theory, Algorithms and Applications. Springer; 2010:27-42. doi:10.1007/978-3-642-15014-2_3
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2010 | Journal Article | IST-REx-ID: 3834   OA
Wolf V, Goel R, Mateescu M, Henzinger TA. Solving the chemical master equation using sliding windows. BMC Systems Biology. 2010;4(42):1-19. doi:10.1186/1752-0509-4-42
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2010 | Conference Paper | IST-REx-ID: 3839   OA
Henzinger TA, Hottelier T, Kovács L, Voronkov A. Invariant and type inference for matrices. In: Vol 5944. Springer; 2010:163-179. doi:10.1007/978-3-642-11319-2_14
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2010 | Conference Paper | IST-REx-ID: 3858
Chatterjee K, Doyen L. The complexity of partial-observation parity games. In: Fermüller C, Voronkov A, eds. Vol 6397. Springer; 2010:1-14. doi:10.1007/978-3-642-16242-8_1
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2010 | Conference Paper | IST-REx-ID: 3860   OA
Chatterjee K, Doyen L, Henzinger TA, Raskin J. Generalized mean-payoff and energy games. In: Vol 8. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:505-516. doi:10.4230/LIPIcs.FSTTCS.2010.505
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2010 | Conference Paper | IST-REx-ID: 3853   OA
Chatterjee K, Doyen L, Edelsbrunner H, Henzinger TA, Rannou P. Mean-payoff automaton expressions. In: Vol 6269. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:269-283. doi:10.1007/978-3-642-15375-4_19
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2010 | Journal Article | IST-REx-ID: 4243   OA
Barton NH, Etheridge A, Véber A. A new model for evolution in a spatial continuum. Electronic Journal of Probability. 2010;15(7):162-216. doi:10.1214/EJP.v15-741
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2010 | Conference Paper | IST-REx-ID: 3865
Chatterjee K, De Alfaro L, Raman V, Sánchez C. Analyzing the impact of change in multi-threaded programs. In: Rosenblum D, Taenzer G, eds. Vol 6013. Springer; 2010:293-307. doi:10.1007/978-3-642-12029-9_21
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2010 | Conference Paper | IST-REx-ID: 4382   OA
Guerraoui R, Henzinger TA, Kapalka M, Singh V. Transactions in the jungle. In: ACM; 2010:263-272. doi:10.1145/1810479.1810529
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2010 | Journal Article | IST-REx-ID: 3772   OA
Barton NH. Understanding adaptation in large populations. PLoS Genetics. 2010;6(6):e1000987. doi:10.1371/journal.pgen.1000987
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2010 | Journal Article | IST-REx-ID: 3777   OA
Barton NH. Mutation and the evolution of recombination. Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1544):1281-1294. doi:10.1098/rstb.2009.0320
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2010 | Journal Article | IST-REx-ID: 3789
Quesada-Hernández E, Caneparo L, Schneider S, et al. Stereotypical cell division orientation controls neural rod midline formation in zebrafish. Current Biology. 2010;20(21):1966-1972. doi:10.1016/j.cub.2010.10.009
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2010 | Conference Paper | IST-REx-ID: 3847   OA
Didier F, Henzinger TA, Mateescu M, Wolf V. SABRE: A tool for the stochastic analysis of biochemical reaction networks. In: IEEE; 2010:193-194. doi:10.1109/QEST.2010.33
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2010 | Journal Article | IST-REx-ID: 3842
Didier F, Henzinger TA, Mateescu M, Wolf V. Fast adaptive uniformization of the chemical master equation. IET Systems Biology. 2010;4(6):441-452. doi:10.1049/iet-syb.2010.0005
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2010 | Conference Paper | IST-REx-ID: 3854
Chatterjee K, Horn F, Löding C. Obliging games. In: Vol 6269. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:284-296. doi:10.1007/978-3-642-15375-4_20
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2010 | Thesis | IST-REx-ID: 3962
Pflicke H.   Dendritic Cell Migration across Basement Membranes in the Skin. IST Austria; 2010.
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2010 | Conference Paper | IST-REx-ID: 3866   OA
Bloem R, Chatterjee K, Greimel K, Henzinger TA, Jobstmann B. Robustness in the presence of liveness. In: Touili T, Cook B, Jackson P, eds. Vol 6174. Springer; 2010:410-424. doi:10.1007/978-3-642-14295-6_36
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2010 | Conference (Editor) | IST-REx-ID: 3859
Chatterjee K, Henzinger TA, eds. Formal Modeling and Analysis of Timed Systems. Vol 6246. Springer; 2010. doi:10.1007/978-3-642-15297-9
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2010 | Journal Article | IST-REx-ID: 3861   OA
Chatterjee K, Henzinger TA, Piterman N. Strategy logic. Information and Computation. 2010;208(6):677-693. doi:10.1016/j.ic.2009.07.004
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2010 | Conference Paper | IST-REx-ID: 4369   OA
Nickovic D, Piterman N. From MTL to deterministic timed automata. In: Henzinger TA, Chatterjee K, eds. Vol 6246. Springer; 2010:152-167. doi:10.1007/978-3-642-15297-9_13
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2010 | Journal Article | IST-REx-ID: 474
Barton NH, Kelleher J, Etheridge A. A new model for extinction and recolonization in two dimensions: Quantifying phylogeography. Evolution. 2010;64(9):2701-2715. doi:10.1111/j.1558-5646.2010.01019.x
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2010 | Conference Paper | IST-REx-ID: 4388
Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. GIST: A solver for probabilistic games. In: Vol 6174. Springer; 2010:665-669. doi:10.1007/978-3-642-14295-6_57
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2010 | Conference Paper | IST-REx-ID: 4390
Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model checking of linearizability of concurrent list implementations. In: Vol 6174. Springer; 2010:465-479. doi:10.1007/978-3-642-14295-6_41
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2010 | Journal Article | IST-REx-ID: 3773   OA
Barton NH. What role does natural selection play in speciation? Philosophical Transactions of the Royal Society of London Series B, Biological Sciences. 2010;365(1547):1825-1840. doi:10.1098/rstb.2010.0001
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2010 | Journal Article | IST-REx-ID: 3785
Palero F, Abello P, Macpherson E, Matthee C, Pascual M. Genetic diversity levels in fishery-exploited spiny lobsters of the Genus Palinurus (Decapoda: Achelata). Journal of Crustacean Biology. 2010;30(4):658-663. doi:10.1651/09-3192.1
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2010 | Journal Article | IST-REx-ID: 3901   OA
Bendich P, Edelsbrunner H, Kerber M. Computing robustness and persistence for images. IEEE Transactions of Visualization and Computer Graphics. 2010;16(6):1251-1260. doi:10.1109/TVCG.2010.139
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2010 | Conference Paper | IST-REx-ID: 3848
Bendich P, Edelsbrunner H, Morozov D, Patel A. The robustness of level sets. In: Vol 6346. Springer; 2010:1-10. doi:10.1007/978-3-642-15775-2_1
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2010 | Conference Paper | IST-REx-ID: 3850
Berberich E, Halperin D, Kerber M, Pogalnikova R. Polygonal reconstruction from approximate offsets. In: TU Dortmund; 2010:12-23.
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2010 | Journal Article | IST-REx-ID: 3867   OA
Chatterjee K, Doyen L, Henzinger TA. Expressiveness and closure properties for quantitative languages. Logical Methods in Computer Science. 2010;6(3):1-23. doi:10.2168/LMCS-6(3:10)2010
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2010 | Book Chapter | IST-REx-ID: 4339   OA
Bergmann J, Danowski P. Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch. In: Bergmann J, Danowski P, eds. Handbuch Bibliothek 2.0. Bibliotheks- und Informationspraxis 41. De Gruyter; 2010:5-20. doi:10.1515/9783110232103
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2010 | Book | IST-REx-ID: 4346   OA
Danowski P, Bergmann J. Handbuch Bibliothek 2.0. De Gruyter; 2010.
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2010 | Conference Paper | IST-REx-ID: 4396   OA
Beyer D, Henzinger TA, Théoduloz G, Zufferey D. Shape refinement through explicit heap analysis. In: Rosenblum D, Taenzer G, eds. Vol 6013. Springer; 2010:263-277. doi:10.1007/978-3-642-12029-9_19
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2010 | Conference Paper | IST-REx-ID: 4389   OA
Doyen L, Henzinger TA, Legay A, Nickovic D. Robustness of sequential circuits. In: IEEE; 2010:77-84. doi:10.1109/ACSD.2010.26
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2010 | Journal Article | IST-REx-ID: 533
Hoenicke J, Leino K, Podelski A, Schäf M, Wies T. Doomed program points. Formal Methods in System Design. 2010;37(2-3):171-199. doi:10.1007/s10703-010-0102-0
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2010 | Conference Paper | IST-REx-ID: 3855
Chatterjee K, Doyen L, Henzinger TA. Qualitative analysis of partially-observable Markov Decision Processes. In: Vol 6281. Springer; 2010:258-269. doi:10.1007/978-3-642-15155-2_24
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2010 | Journal Article | IST-REx-ID: 2409   OA
Kupczok A, Schmidt H, Von Haeseler A. Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology. 2010;5(1):37. doi:10.1186/1748-7188-5-37
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2010 | Journal Article | IST-REx-ID: 3774
Senn H, Swanson G, Goodman S, Barton NH, Pemberton J. Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology. 2010;79(2):414-425. doi:10.1111/j.1365-2656.2009.01633.x
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2010 | Journal Article | IST-REx-ID: 3779   OA
Rosas U, Barton NH, Copsey L, Barbier De Reuille P, Coen E. Cryptic variation between species and the basis of hybrid performance. PLoS Biology. 2010;8(7):e1000429. doi:10.1371/journal.pbio.1000429
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2010 | Conference Paper | IST-REx-ID: 3793
Nowozin S, Gehler P, Lampert C. On parameter learning in CRF-based approaches to object class image segmentation. In: Vol 6316. Springer; 2010:98-111. doi:10.1007/978-3-642-15567-3_8
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2010 | Journal Article | IST-REx-ID: 3832   OA
Guzmán J, Jonas PM. Beyond TARPs: The growing list of auxiliary AMPAR subunits. Neuron. 2010;66(1):8-10. doi:10.1016/j.neuron.2010.04.003
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2010 | Journal Article | IST-REx-ID: 3604
Senn H, Goodman S, Swanson G, Barton NH, Pemberton J. Investigating temporal changes in hybridisation and introgression between invasive sika (Cervus nippon) and native red deer (Cervus elaphus) on the Kintyre Peninsula, Scotland. Molecular Ecology. 2010;19(5):910-924. doi:10.1111/j.1365-294X.2009.04497.x
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2010 | Conference Paper | IST-REx-ID: 3851   OA
Chatterjee K, Doyen L. Energy parity games. In: Vol 6199. Springer; 2010:599-610. doi:10.1007/978-3-642-14162-1_50
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2010 | Conference Paper | IST-REx-ID: 3849   OA
Bendich P, Edelsbrunner H, Kerber M, Patel A. Persistent homology under non-uniform error. In: Vol 6281. Springer; 2010:12-23. doi:10.1007/978-3-642-15155-2_2
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2010 | Journal Article | IST-REx-ID: 3868   OA
Chatterjee K, De Alfaro L, Majumdar R, Raman V. Algorithms for game metrics. Logical Methods in Computer Science. 2010;6(3):1-27. doi:10.2168/LMCS-6(3:13)2010
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2010 | Journal Article | IST-REx-ID: 4157   OA
Papusheva E, Heisenberg C-PJ. Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis. EMBO Journal. 2010;29(16):2753-2768. doi:10.1038/emboj.2010.182
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2010 | Journal Article | IST-REx-ID: 3863   OA
Berwanger D, Chatterjee K, De Wulf M, Doyen L, Henzinger TA. Strategy construction for parity games with imperfect information. Information and Computation. 2010;208(10):1206-1220. doi:10.1016/j.ic.2009.09.006
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2010 | Conference Paper | IST-REx-ID: 3856   OA
Chatterjee K, Doyen L, Gimbert H, Henzinger TA. Randomness for free. In: Vol 6281. Springer; 2010:246-257. doi:10.1007/978-3-642-15155-2_23
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2010 | Conference Paper | IST-REx-ID: 4361   OA
Wies T, Zufferey D, Henzinger TA. Forward analysis of depth-bounded processes. In: Ong L, ed. Vol 6014. Springer; 2010:94-108. doi:10.1007/978-3-642-12032-9_8
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2010 | Conference Paper | IST-REx-ID: 4378   OA
Kuncak V, Piskac R, Suter P, Wies T. Building a calculus of data structures. In: Barthe G, Hermenegildo M, eds. Vol 5944. Springer; 2010:26-44. doi:10.1007/978-3-642-11319-2_6
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2010 | Conference Paper | IST-REx-ID: 4380   OA
Henzinger TA, Tomar A, Singh V, Wies T, Zufferey D. A marketplace for cloud resources. In: ACM; 2010:1-8. doi:10.1145/1879021.1879022
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2010 | Book Chapter | IST-REx-ID: 4392
Cerny P, Henzinger TA, Radhakrishna A. Quantitative Simulation Games. In: Manna Z, Peled D, eds. Time For Verification: Essays in Memory of Amir Pnueli. Vol 6200. Essays in Memory of Amir Pnueli. Springer; 2010:42-60. doi:10.1007/978-3-642-13754-9_3
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2010 | Conference Paper | IST-REx-ID: 488   OA
Alur R, Cerny P. Expressiveness of streaming string transducers. In: Vol 8. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:1-12. doi:10.4230/LIPIcs.FSTTCS.2010.1
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2010 | Technical Report | IST-REx-ID: 5388   OA
Chatterjee K, Cerny P, Henzinger TA, Radhakrishna A, Singh R. Quantitative Synthesis for Concurrent Programs. IST Austria; 2010. doi:10.15479/AT:IST-2010-0004
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2010 | Technical Report | IST-REx-ID: 5390   OA
Chatterjee K, Fijalkow N. Topological, Automata-Theoretic and Logical Characterization of Finitary Languages. IST Austria; 2010. doi:10.15479/AT:IST-2010-0002
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2009 | Journal Article | IST-REx-ID: 3775   OA
Barton NH, Coe J. On the application of statistical physics to evolutionary biology. Journal of Theoretical Biology. 2009;259(2):317-324. doi:10.1016/j.jtbi.2009.03.019
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2009 | Conference Paper | IST-REx-ID: 3871   OA
Chatterjee K, Doyen L, Henzinger TA. Probabilistic weighted automata. In: Vol 5710. Springer; 2009:244-258. doi:10.1007/978-3-642-04081-8_17
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2009 | Journal Article | IST-REx-ID: 4242   OA
Barton NH, De Cara M. The evolution of strong reproductive isolation. Evolution; International Journal of Organic Evolution. 2009;63(5):1171-1190. doi:10.1111/j.1558-5646.2009.00622.x
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2009 | Conference Paper | IST-REx-ID: 4545   OA
Chatterjee K, Doyen L, Henzinger TA. A survey of stochastic games with limsup and liminf objectives. In: Vol 5556. Springer; 2009:1-15. doi:10.1007/978-3-642-02930-1_1
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2009 | Conference Paper | IST-REx-ID: 4569   OA
Bloem R, Chatterjee K, Henzinger TA, Jobstmann B. Better quality in synthesis through quantitative objectives. In: Vol 5643. Springer; 2009:140-156. doi:10.1007/978-3-642-02658-4_14
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2009 | Book Chapter | IST-REx-ID: 3675
Barton NH. Why sex and recombination? . In: Cold Spring Harbor Symposia on Quantitative Biology. Vol 74. Cold Spring Harbor Laboratory Press; 2009:187-195. doi:10.1101/sqb.2009.74.030
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2009 | Conference Paper | IST-REx-ID: 3841   OA
Henzinger TA, Jobstmann B, Wolf V. Formalisms for specifying Markovian population models. In: Vol 5797. Springer; 2009:3-23. doi:10.1007/978-3-642-04420-5_2
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2009 | Journal Article | IST-REx-ID: 4231
Barton NH, De Vladar H. Statistical mechanics and the evolution of polygenic quantitative traits. Genetics. 2009;181(3):997-1011. doi:10.1534/genetics.108.099309
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2009 | Technical Report | IST-REx-ID: 5392   OA
Chatterjee K. Probabilistic Automata on Infinite Words: Decidability and Undecidability Results. IST Austria; 2009. doi:10.15479/AT:IST-2009-0004
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2009 | Conference Paper | IST-REx-ID: 4542   OA
Chatterjee K, Doyen L, Henzinger TA. Alternating weighted automata. In: Vol 5699. Springer; 2009:3-13. doi:10.1007/978-3-642-03409-1_2
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2009 | Journal Article | IST-REx-ID: 4136
Polechova J, Barton NH, Marion G. Species’ range: Adaptation in space and time. American Naturalist. 2009;174(5):E186-E204. doi:10.1086/605958
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2009 | Technical Report | IST-REx-ID: 5393   OA
Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. Gist: A Solver for Probabilistic Games. IST Austria; 2009. doi:10.15479/AT:IST-2009-0003
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2009 | Journal Article | IST-REx-ID: 3780   OA
Davison A, Barton NH, Clarke B. The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails. Journal of Evolutionary Biology. 2009;22(8):1624-1635. doi:10.1111/j.1420-9101.2009.01770.x
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2009 | Conference Paper | IST-REx-ID: 3843
Didier F, Henzinger TA, Mateescu M, Wolf V. Fast adaptive uniformization of the chemical master equation. In: Vol 4. IEEE; 2009:118-127. doi:10.1109/HiBi.2009.23
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2009 | Conference Paper | IST-REx-ID: 3968   OA
Edelsbrunner H, Harer J. The persistent Morse complex segmentation of a 3-manifold. In: Vol 5903. Springer; 2009:36-50. doi:10.1007/978-3-642-10470-1_4
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2009 | Conference Paper | IST-REx-ID: 4543
Chatterjee K, Henzinger TA, Horn F. Stochastic games with finitary objectives. In: Vol 5734. Springer; 2009:34-54. doi:10.1007/978-3-642-03816-7_4
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2009 | Technical Report | IST-REx-ID: 5394   OA
Chatterjee K, Henzinger TA, Horn F. Improved Lower Bounds for Request-Response and Finitary Streett Games. IST Austria; 2009. doi:10.15479/AT:IST-2009-0002
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2009 | Conference Paper | IST-REx-ID: 3837   OA
Tripakis S, Lickly B, Henzinger TA, Lee E. On relational interfaces. In: EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software. ACM; 2009:67-76. doi:10.1145/1629335.1629346
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2009 | Conference Paper | IST-REx-ID: 3844   OA
Henzinger TA, Kirsch C, Marques E, Sokolova A. Distributed, modular HTL. In: IEEE; 2009:171-180. doi:10.1109/RTSS.2009.9
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2009 | Journal Article | IST-REx-ID: 3870   OA
Chatterjee K, Henzinger TA, Horn F. Finitary winning in omega-regular games. ACM Transactions on Computational Logic (TOCL). 2009;11(1). doi:10.1145/1614431.1614432
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2009 | Technical Report | IST-REx-ID: 5395   OA
Chatterjee K, Doyen L, Henzinger TA. Qualitative Analysis of Partially-Observable Markov Decision Processes. IST Austria; 2009. doi:10.15479/AT:IST-2009-0001
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2008 | Journal Article | IST-REx-ID: 517
Barton NH. Identity and coalescence in structured populations: A commentary on “Inbreeding coefficients and coalescence times” by Montgomery Slatkin. Genetical Research. 2008;89(5-6):475-477. doi:10.1017/S0016672308009683
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