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2684 Publications

2010 | Technical Report | IST-REx-ID: 5389
Cerny, P., Henzinger, T. A., & Radhakrishna, A. (2010). Simulation distances. IST Austria. https://doi.org/10.15479/AT:IST-2010-0003
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2010 | Technical Report | IST-REx-ID: 5391
Cerny, P., Radhakrishna, A., Zufferey, D., Chaudhuri, S., & Alur, R. (2010). Model checking of linearizability of concurrent list implementations. IST Austria. https://doi.org/10.15479/AT:IST-2010-0001
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2010 | Journal Article | IST-REx-ID: 3303   OA
Weissman, D., Feldman, M., & Fisher, D. (2010). The rate of fitness-valley crossing in sexual populations. Genetics, 186(4), 1389–1410. https://doi.org/10.1534/genetics.110.123240
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2010 | Conference Paper | IST-REx-ID: 3719   OA
Feret, J., Henzinger, T. A., Koeppl, H., & Petrov, T. (2010). Lumpability abstractions of rule-based systems (Vol. 40, pp. 142–161). Presented at the MECBIC: Membrane Computing and Biologically Inspired Process Calculi, Jena, Germany: Open Publishing Association.
View | Files available | arXiv
 
2010 | Journal Article | IST-REx-ID: 3776   OA
Barton, N. H. (2010). Genetic linkage and natural selection. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 365(1552), 2559–2569. https://doi.org/10.1098/rstb.2010.0106
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2010 | Journal Article | IST-REx-ID: 3783
Palero, F., González Candelas, F., & Pascual, M. (2010). Microsatelight – Pipeline to expedite microsatellite analysis. Journal of Heredity, 102(2), 247–249. https://doi.org/10.1093/jhered/esq111
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2010 | Journal Article | IST-REx-ID: 3788
Klopper, A., Krens, G., Grill, S., & Heisenberg, C.-P. J. (2010). Finite-size corrections to scaling behavior in sorted cell aggregates. The European Physical Journal E: Soft Matter and Biological Physics, 33(2), 99–103. https://doi.org/10.1140/epje/i2010-10642-y
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2010 | Journal Article | IST-REx-ID: 3790   OA
Diz Muñoz, A., Krieg, M., Bergert, M., Ibarlucea Benitez, I., Müller, D., Paluch, E., & Heisenberg, C.-P. J. (2010). Control of directed cell migration in vivo by membrane-to-cortex attachment. PLoS Biology, 8(11). https://doi.org/10.1371/journal.pbio.1000544
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2010 | Book Chapter | IST-REx-ID: 3795   OA
Edelsbrunner, H., Morozov, D., & Patel, A. (2010). The stability of the apparent contour of an orientable 2-manifold. In Topological Data Analysis and Visualization: Theory, Algorithms and Applications (pp. 27–42). Springer. https://doi.org/10.1007/978-3-642-15014-2_3
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2010 | Journal Article | IST-REx-ID: 3834   OA
Wolf, V., Goel, R., Mateescu, M., & Henzinger, T. A. (2010). Solving the chemical master equation using sliding windows. BMC Systems Biology, 4(42), 1–19. https://doi.org/10.1186/1752-0509-4-42
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2010 | Conference Paper | IST-REx-ID: 3839   OA
Henzinger, T. A., Hottelier, T., Kovács, L., & Voronkov, A. (2010). Invariant and type inference for matrices (Vol. 5944, pp. 163–179). Presented at the VMCAI: Verification, Model Checking and Abstract Interpretation, Madrid, Spain: Springer. https://doi.org/10.1007/978-3-642-11319-2_14
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2010 | Conference Paper | IST-REx-ID: 3853   OA
Chatterjee, K., Doyen, L., Edelsbrunner, H., Henzinger, T. A., & Rannou, P. (2010). Mean-payoff automaton expressions (Vol. 6269, pp. 269–283). Presented at the CONCUR: Concurrency Theory, Paris, France: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.1007/978-3-642-15375-4_19
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2010 | Conference Paper | IST-REx-ID: 3865
Chatterjee, K., De Alfaro, L., Raman, V., & Sánchez, C. (2010). Analyzing the impact of change in multi-threaded programs. In D. Rosenblum & G. Taenzer (Eds.) (Vol. 6013, pp. 293–307). Presented at the FASE: Fundamental Approaches To Software Engineering, Paphos, Cyprus: Springer. https://doi.org/10.1007/978-3-642-12029-9_21
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2010 | Journal Article | IST-REx-ID: 4243   OA
Barton, N. H., Etheridge, A., & Véber, A. (2010). A new model for evolution in a spatial continuum. Electronic Journal of Probability, 15(7), 162–216. https://doi.org/10.1214/EJP.v15-741
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2010 | Conference Paper | IST-REx-ID: 4382   OA
Guerraoui, R., Henzinger, T. A., Kapalka, M., & Singh, V. (2010). Transactions in the jungle (pp. 263–272). Presented at the SPAA: ACM Symposium on Parallel Algorithms and Architectures, Santorini, Greece: ACM. https://doi.org/10.1145/1810479.1810529
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2010 | Conference Paper | IST-REx-ID: 3860   OA
Chatterjee, K., Doyen, L., Henzinger, T. A., & Raskin, J. (2010). Generalized mean-payoff and energy games (Vol. 8, pp. 505–516). Presented at the FSTTCS: Foundations of Software Technology and Theoretical Computer Science, Chennai, India: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.FSTTCS.2010.505
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2010 | Conference Paper | IST-REx-ID: 3858   OA
Chatterjee, K., & Doyen, L. (2010). The complexity of partial-observation parity games (Vol. 6397, pp. 1–14). Presented at the LPAR: Logic for Programming, Artificial Intelligence, and Reasoning, Yogyakarta, Indonesia: Springer. https://doi.org/10.1007/978-3-642-16242-8_1
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2010 | Journal Article | IST-REx-ID: 3772   OA
Barton, N. H. (2010). Understanding adaptation in large populations. PLoS Genetics, 6(6). https://doi.org/10.1371/journal.pgen.1000987
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2010 | Journal Article | IST-REx-ID: 3777   OA
Barton, N. H. (2010). Mutation and the evolution of recombination. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 365(1544), 1281–1294. https://doi.org/10.1098/rstb.2009.0320
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2010 | Journal Article | IST-REx-ID: 3789
Quesada-Hernández, E., Caneparo, L., Schneider, S., Winkler, S., Liebling, M., Fraser, S., & Heisenberg, C.-P. J. (2010). Stereotypical cell division orientation controls neural rod midline formation in zebrafish. Current Biology, 20(21), 1966–1972. https://doi.org/10.1016/j.cub.2010.10.009
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2010 | Conference Paper | IST-REx-ID: 3847   OA
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2010). SABRE: A tool for the stochastic analysis of biochemical reaction networks (pp. 193–194). Presented at the QEST: Quantitative Evaluation of Systems, Williamsburg, USA: IEEE. https://doi.org/10.1109/QEST.2010.33
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2010 | Conference Paper | IST-REx-ID: 3866   OA
Bloem, R., Chatterjee, K., Greimel, K., Henzinger, T. A., & Jobstmann, B. (2010). Robustness in the presence of liveness. In T. Touili, B. Cook, & P. Jackson (Eds.) (Vol. 6174, pp. 410–424). Presented at the CAV: Computer Aided Verification, Edinburgh, UK: Springer. https://doi.org/10.1007/978-3-642-14295-6_36
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2010 | Conference Paper | IST-REx-ID: 3854
Chatterjee, K., Horn, F., & Löding, C. (2010). Obliging games (Vol. 6269, pp. 284–296). Presented at the CONCUR: Concurrency Theory, Paris, France: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.1007/978-3-642-15375-4_20
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2010 | Conference (Editor) | IST-REx-ID: 3859
Chatterjee, K., & Henzinger, T. A. (Eds.). (2010). Formal modeling and analysis of timed systems (Vol. 6246). Presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria: Springer. https://doi.org/10.1007/978-3-642-15297-9
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2010 | Thesis | IST-REx-ID: 3962
Pflicke, H. (2010).   Dendritic cell migration across basement membranes in the skin. IST Austria.
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2010 | Journal Article | IST-REx-ID: 3861
Chatterjee, K., Henzinger, T. A., & Piterman, N. (2010). Strategy logic. Information and Computation, 208(6), 677–693. https://doi.org/10.1016/j.ic.2009.07.004
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2010 | Conference Paper | IST-REx-ID: 4369   OA
Nickovic, D., & Piterman, N. (2010). From MTL to deterministic timed automata. In T. A. Henzinger & K. Chatterjee (Eds.) (Vol. 6246, pp. 152–167). Presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria: Springer. https://doi.org/10.1007/978-3-642-15297-9_13
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2010 | Journal Article | IST-REx-ID: 474
Barton, N. H., Kelleher, J., & Etheridge, A. (2010). A new model for extinction and recolonization in two dimensions: Quantifying phylogeography. Evolution, 64(9), 2701–2715. https://doi.org/10.1111/j.1558-5646.2010.01019.x
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2010 | Conference Paper | IST-REx-ID: 4388   OA
Chatterjee, K., Henzinger, T. A., Jobstmann, B., & Radhakrishna, A. (2010). GIST: A solver for probabilistic games (Vol. 6174, pp. 665–669). Presented at the CAV: Computer Aided Verification, Edinburgh, UK: Springer. https://doi.org/10.1007/978-3-642-14295-6_57
View | Files available | DOI | arXiv
 
2010 | Conference Paper | IST-REx-ID: 4390   OA
Cerny, P., Radhakrishna, A., Zufferey, D., Chaudhuri, S., & Alur, R. (2010). Model checking of linearizability of concurrent list implementations (Vol. 6174, pp. 465–479). Presented at the CAV: Computer Aided Verification, Edinburgh, UK: Springer. https://doi.org/10.1007/978-3-642-14295-6_41
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2010 | Journal Article | IST-REx-ID: 3842
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2010). Fast adaptive uniformization of the chemical master equation. IET Systems Biology, 4(6), 441–452. https://doi.org/10.1049/iet-syb.2010.0005
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2010 | Journal Article | IST-REx-ID: 3773   OA
Barton, N. H. (2010). What role does natural selection play in speciation? Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences, 365(1547), 1825–1840. https://doi.org/10.1098/rstb.2010.0001
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2010 | Journal Article | IST-REx-ID: 3785
Palero, F., Abello, P., Macpherson, E., Matthee, C., & Pascual, M. (2010). Genetic diversity levels in fishery-exploited spiny lobsters of the Genus Palinurus (Decapoda: Achelata). Journal of Crustacean Biology, 30(4), 658–663. https://doi.org/10.1651/09-3192.1
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2010 | Conference Paper | IST-REx-ID: 3848
Bendich, P., Edelsbrunner, H., Morozov, D., & Patel, A. (2010). The robustness of level sets (Vol. 6346, pp. 1–10). Presented at the ESA: European Symposium on Algorithms, Liverpool, UK: Springer. https://doi.org/10.1007/978-3-642-15775-2_1
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2010 | Conference Paper | IST-REx-ID: 3850
Berberich, E., Halperin, D., Kerber, M., & Pogalnikova, R. (2010). Polygonal reconstruction from approximate offsets (pp. 12–23). Presented at the EuroCG: European Workshop on Computational Geometry, Dortmund, Germany: TU Dortmund.
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2010 | Journal Article | IST-REx-ID: 3901   OA
Bendich, P., Edelsbrunner, H., & Kerber, M. (2010). Computing robustness and persistence for images. IEEE Transactions of Visualization and Computer Graphics, 16(6), 1251–1260. https://doi.org/10.1109/TVCG.2010.139
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2010 | Book | IST-REx-ID: 4346   OA
Danowski, P., & Bergmann, J. (2010). Handbuch Bibliothek 2.0. De Gruyter.
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2010 | Book Chapter | IST-REx-ID: 4339   OA
Bergmann, J., & Danowski, P. (2010). Ist Bibliothek 2.0 überhaupt noch relevant? – Eine Einleitung in das Handbuch. In J. Bergmann & P. Danowski (Eds.), Handbuch Bibliothek 2.0 (pp. 5–20). De Gruyter. https://doi.org/10.1515/9783110232103
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2010 | Conference Paper | IST-REx-ID: 4396   OA
Beyer, D., Henzinger, T. A., Théoduloz, G., & Zufferey, D. (2010). Shape refinement through explicit heap analysis. In D. Rosenblum & G. Taenzer (Eds.) (Vol. 6013, pp. 263–277). Presented at the FASE: Fundamental Approaches To Software Engineering, Paphos, Cyprus: Springer. https://doi.org/10.1007/978-3-642-12029-9_19
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2010 | Conference Paper | IST-REx-ID: 4389   OA
Doyen, L., Henzinger, T. A., Legay, A., & Nickovic, D. (2010). Robustness of sequential circuits (pp. 77–84). Presented at the ACSD: Application of Concurrency to System Design, IEEE. https://doi.org/10.1109/ACSD.2010.26
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2010 | Journal Article | IST-REx-ID: 3867
Chatterjee, K., Doyen, L., & Henzinger, T. A. (2010). Expressiveness and closure properties for quantitative languages. Logical Methods in Computer Science, 6(3), 1–23. https://doi.org/10.2168/LMCS-6(3:10)2010
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2010 | Journal Article | IST-REx-ID: 533
Hoenicke, J., Leino, K., Podelski, A., Schäf, M., & Wies, T. (2010). Doomed program points. Formal Methods in System Design, 37(2–3), 171–199. https://doi.org/10.1007/s10703-010-0102-0
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2010 | Conference Paper | IST-REx-ID: 3855
Chatterjee, K., Doyen, L., & Henzinger, T. A. (2010). Qualitative analysis of partially-observable Markov Decision Processes (Vol. 6281, pp. 258–269). Presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic: Springer. https://doi.org/10.1007/978-3-642-15155-2_24
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2010 | Journal Article | IST-REx-ID: 2409   OA
Kupczok, A., Schmidt, H., & Von Haeseler, A. (2010). Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology, 5(1). https://doi.org/10.1186/1748-7188-5-37
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2010 | Journal Article | IST-REx-ID: 3774
Senn, H., Swanson, G., Goodman, S., Barton, N. H., & Pemberton, J. (2010). Phenotypic correlates of hybridisation between red and sika deer (genus Cervus). Journal of Animal Ecology, 79(2), 414–425. https://doi.org/10.1111/j.1365-2656.2009.01633.x
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2010 | Journal Article | IST-REx-ID: 3779   OA
Rosas, U., Barton, N. H., Copsey, L., Barbier De Reuille, P., & Coen, E. (2010). Cryptic variation between species and the basis of hybrid performance. PLoS Biology, 8(7). https://doi.org/10.1371/journal.pbio.1000429
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2010 | Journal Article | IST-REx-ID: 3604
Senn, H., Goodman, S., Swanson, G., Barton, N. H., & Pemberton, J. (2010). Investigating temporal changes in hybridisation and introgression between invasive sika (Cervus nippon) and native red deer (Cervus elaphus) on the Kintyre Peninsula, Scotland. Molecular Ecology, 19(5), 910–924. https://doi.org/10.1111/j.1365-294X.2009.04497.x
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2010 | Journal Article | IST-REx-ID: 3832   OA
Guzmán, J., & Jonas, P. M. (2010). Beyond TARPs: The growing list of auxiliary AMPAR subunits. Neuron, 66(1), 8–10. https://doi.org/10.1016/j.neuron.2010.04.003
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2010 | Conference Paper | IST-REx-ID: 3849   OA
Bendich, P., Edelsbrunner, H., Kerber, M., & Patel, A. (2010). Persistent homology under non-uniform error (Vol. 6281, pp. 12–23). Presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic: Springer. https://doi.org/10.1007/978-3-642-15155-2_2
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2010 | Journal Article | IST-REx-ID: 3868   OA
Chatterjee, K., De Alfaro, L., Majumdar, R., & Raman, V. (2010). Algorithms for game metrics. Logical Methods in Computer Science, 6(3), 1–27. https://doi.org/10.2168/LMCS-6(3:13)2010
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