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2676 Publications

2020 | Research Data | IST-REx-ID: 7383
Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation
R. Grah, Matlab Scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression Regulation, IST Austria, 2020.
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2020 | Journal Article | IST-REx-ID: 7472
Replay of behavioral sequences in the medial prefrontal cortex during rule switching
K. Käfer, M. Nardin, K. Blahna, J.L. Csicsvari, Neuron 106 (2020) 154–165.e6.
View | Files available | DOI | PubMed | Europe PMC
 
2020 | Thesis | IST-REx-ID: 7629   OA
Gradient flows in spaces of probability measures for finite-volume schemes, metric graphs and non-reversible Markov chains
D.L. Forkert, Gradient Flows in Spaces of Probability Measures for Finite-Volume Schemes, Metric Graphs and Non-Reversible Markov Chains, IST Austria, 2020.
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2020 | Journal Article | IST-REx-ID: 7686
Neo-gibberellin signaling: Guiding the next generation of the green revolution
H. Xue, Y. Zhang, G. Xiao, Trends in Plant Science (2020).
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2020 | Conference Paper | IST-REx-ID: 7802   OA
Graph sparsification for derandomizing massively parallel computation with low space
A. Czumaj, P. Davies, M. Parter, in:, Proceedings of the 32nd ACM Symposium on Parallelism in Algorithms and Architectures (SPAA 2020), Association for Computing Machinery, n.d.
View | Download (ext.) | arXiv
 
2020 | Conference Paper | IST-REx-ID: 7807   OA
Connectivity of triangulation flip graphs in the plane (Part I: Edge flips)
U. Wagner, E. Welzl, in:, Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms, SIAM, 2020, pp. 2823–2841.
View | DOI | Download (ext.) | arXiv
 
2020 | Journal Article | IST-REx-ID: 7814   OA
SCOPES: Sparking curiosity through Open-Source platforms in education and science
R.J. Beattie, S. Hippenmeyer, F. Pauler, Frontiers in Education 5 (2020) 48.
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2020 | Journal Article | IST-REx-ID: 6563   OA
Are two given maps homotopic? An algorithmic viewpoint
M. Filakovský, L. Vokřínek, Foundations of Computational Mathematics 20 (2020) 311–330.
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2020 | Journal Article | IST-REx-ID: 6796   OA
Partial coherence and frustration in self-organizing spherical grids
F. Stella, E. Urdapilleta, Y. Luo, A. Treves, Hippocampus 30 (2020) 302–313.
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2020 | Journal Article | IST-REx-ID: 7883   OA
Regulation of size and scale in vertebrate spinal cord development
K. Kuzmicz-Kowalska, A. Kicheva, Wiley Interdisciplinary Reviews: Developmental Biology (2020) e383.
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2020 | Journal Article | IST-REx-ID: 7888   OA
Zebrafish embryonic explants undergo genetically encoded self-assembly
A. Schauer, D.C. Nunes Pinheiro, R. Hauschild, C.-P.J. Heisenberg, ELife 9 (2020) e55190.
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2020 | Journal Article | IST-REx-ID: 7600   OA
The lipid code-dependent phosphoswitch PDK1–D6PK activates PIN-mediated auxin efflux in Arabidopsis
S. Tan, X. Zhang, W. Kong, X.-L. Yang, G. Molnar, Z. Vondráková, R. Filepová, J. Petrášek, J. Friml, H.-W. Xue, Nature Plants 6 (2020) 556–569.
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2020 | Journal Article | IST-REx-ID: 7876
T cells: Bridge-and-channel commute to the white pulp
M.K. Sixt, T. Lämmermann, Immunity 52 (2020) 721–723.
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2020 | Journal Article | IST-REx-ID: 7864
Precision medicine in clinical oncology: the journey from IgG antibody to IgE
J. Singer, J. Singer, E. Jensen-Jarolim, Current Opinion in Allergy and Clinical Immunology 20 (2020) 282–289.
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2020 | Journal Article | IST-REx-ID: 6918
An efficient algorithm for computing network reliability in small treewidth
A.K. Goharshady, F. Mohammadi, Reliability Engineering and System Safety 193 (2020).
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2020 | Journal Article | IST-REx-ID: 7149
Chromatinopathies: A focus on Cornelia de Lange syndrome
L. Avagliano, I. Parenti, P. Grazioli, E. Di Fede, C. Parodi, M. Mariani, F.J. Kaiser, A. Selicorni, C. Gervasini, V. Massa, Clinical Genetics 97 (2020) 3–11.
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2020 | Journal Article | IST-REx-ID: 7339   OA
Microtubule and actin differentially regulate synaptic vesicle cycling to maintain high-frequency neurotransmission
L. Piriya Ananda Babu, H.Y. Wang, K. Eguchi, L. Guillaud, T. Takahashi, The Journal of Neuroscience 40 (2020) 131–142.
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2020 | Journal Article | IST-REx-ID: 6761
Dynamic resource allocation games
G. Avni, T.A. Henzinger, O. Kupferman, Theoretical Computer Science 807 (2020) 42–55.
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2020 | Preprint | IST-REx-ID: 7389   OA
Isometric study of Wasserstein spaces - the real line
G.P. Geher, T. Titkos, D. Virosztek, (n.d.).
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2020 | Journal Article | IST-REx-ID: 7428   OA
Effect of Zeeman coupling on the Majorana vortex modes in iron-based topological superconductors
A. Ghazaryan, P.L.S. Lopes, P. Hosur, M.J. Gilbert, P. Ghaemi, Physical Review B 101 (2020) 020504.
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2020 | Journal Article | IST-REx-ID: 7466   OA
Muscle function and homeostasis require cytokine inhibition of AKT activity in Drosophila
K. Kierdorf, F. Hersperger, J. Sharrock, C.M. Vincent, P. Ustaoglu, J. Dou, A. György, O. Groß, D.E. Siekhaus, M.S. Dionne, ELife 9 (2020) e51595.
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2020 | Journal Article | IST-REx-ID: 7473   OA View | Files available | DOI | Download (ext.)
 
2020 | Journal Article | IST-REx-ID: 7219
Adaptive growth: Shaping auxin-mediated root system architecture
G. Xiao, Y. Zhang, Trends in Plant Science 25 (2020) 121–123.
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2020 | Journal Article | IST-REx-ID: 7512   OA
Local laws for polynomials of Wigner matrices
L. Erdös, T.H. Krüger, Y. Nemish, Journal of Functional Analysis (n.d.) 108507.
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2020 | Journal Article | IST-REx-ID: 7497
Colonization of endophyte Acremonium sp. D212 in Panax notoginseng and rice mediated by auxin and jasmonic acid
L. Han, X. Zhou, Y. Zhao, S. Zhu, L. Wu, Y. He, X. Ping, X. Lu, W. Huang, J. Qian, L. Zhang, X. Jiang, D. Zhu, C. Luo, S. Li, Q. Dong, Q. Fu, K. Deng, X. Wang, L. Wang, S. Peng, J. Wu, W. Li, J. Friml, Y. Zhu, X. He, Y. Du, Journal of Integrative Plant Biology (2020).
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2020 | Journal Article | IST-REx-ID: 7500   OA View | DOI | Download (ext.) | PubMed | Europe PMC
 
2020 | Journal Article | IST-REx-ID: 7567   OA
Coxeter triangulations have good quality
A. Choudhary, S. Kachanovich, M. Wintraecken, Mathematics in Computer Science (2020).
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2020 | Conference Paper | IST-REx-ID: 7346   OA
The evolutionary price of anarchy: Locally bounded agents in a dynamic virus game
L. Schmid, K. Chatterjee, S. Schmid, in:, Proceedings of the 23rd International Conference on Principles of Distributed Systems, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, p. 21.
View | Files available | DOI | arXiv
 
2020 | Preprint | IST-REx-ID: 7601   OA
Plasmodesmata-like intercellular connections by plant remorin in animal cells
Z. Wei, S. Tan, T. Liu, Y. Wu, J.-G. Lei, Z. Chen, J. Friml, H.-W. Xue, K. Liao, BioRxiv (2020).
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2020 | Journal Article | IST-REx-ID: 7586   OA
Uncoupling endosomal CLC chloride/proton exchange causes severe neurodegeneration
S. Weinert, N. Gimber, D. Deuschel, T. Stuhlmann, D. Puchkov, Z. Farsi, C.F. Ludwig, G. Novarino, K.I. López-Cayuqueo, R. Planells-Cases, T.J. Jentsch, EMBO Journal (n.d.) e103358.
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2020 | Journal Article | IST-REx-ID: 7593   OA
LIS1 determines cleavage plane positioning by regulating actomyosin-mediated cell membrane contractility
H.M. Moon, S. Hippenmeyer, L. Luo, A. Wynshaw-Boris, ELife 9 (2020) 51512.
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2020 | Conference Paper | IST-REx-ID: 7505
Outside the box: Abstraction-based monitoring of neural networks
T.A. Henzinger, A. Lukina, C. Schilling, in:, 24th European Conference on Artificial Intelligence, n.d.
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2020 | Journal Article | IST-REx-ID: 7618   OA
Quantum Hellinger distances revisited
J. Pitrik, D. Virosztek, Letters in Mathematical Physics (2020).
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2020 | Journal Article | IST-REx-ID: 7632   OA
Action representation in the mouse parieto-frontal network
T. Tombaz, B.A. Dunn, K. Hovde, R.J. Cubero, B. Mimica, P. Mamidanna, Y. Roudi, J.R. Whitlock, Scientific Reports 10 (2020) 5559.
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2020 | Journal Article | IST-REx-ID: 7637   OA
From weakly interacting particles to a regularised Dean-Kawasaki model
F. Cornalba, T. Shardlow, J. Zimmer, Nonlinearity 33 (2020) 864–891.
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2020 | Journal Article | IST-REx-ID: 7656   OA
Clustering of neural activity: A design principle for population codes
M.J. Berry, G. Tkačik, Frontiers in Computational Neuroscience 14 (2020) 20.
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2020 | Journal Article | IST-REx-ID: 7651   OA
A developmentally descriptive method for quantifying shape in gastropod shells
J. Larsson, A.M. Westram, S. Bengmark, T. Lundh, R.K. Butlin, Journal of The Royal Society Interface 17 (2020) 20190721.
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2020 | Journal Article | IST-REx-ID: 7663   OA
Wood deformation leads to rearrangement of molecules at the nanoscale
M. Felhofer, P. Bock, A. Singh, B. Prats Mateu, R. Zirbs, N. Gierlinger, Nano Letters 20 (2020) 2647–2653.
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2020 | Preprint | IST-REx-ID: 7675   OA
Normative models of enhancer function
R. Grah, B. Zoller, G. Tkačik, BioRxiv (2020).
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2020 | Journal Article | IST-REx-ID: 7790   OA
The free energy of the two-dimensional dilute Bose gas. I. Lower bound
A. Deuchert, S. Mayer, R. Seiringer, Forum of Mathematics, Sigma 8 (2020) e20.
View | Files available | DOI | arXiv
 
2020 | Journal Article | IST-REx-ID: 7788   OA
NDUFS4 deletion triggers loss of NDUFA12 in Ndufs4−/− mice and Leigh syndrome patients: A stabilizing role for NDUFAF2
M.J.W. Adjobo-Hermans, R. De Haas, P.H.G.M. Willems, A. Wojtala, S.E. Van Emst-De Vries, J.A. Wagenaars, M. Van Den Brand, R.J. Rodenburg, J.A.M. Smeitink, L.G. Nijtmans, L.A. Sazanov, M.R. Wieckowski, W.J.H. Koopman, Biochimica et Biophysica Acta - Bioenergetics 1861 (2020) 148213.
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2020 | Journal Article | IST-REx-ID: 7687   OA
(Core Trust) Seal your repository!
D. Ernst, G. Novotny, E.M. Schönher, Mitteilungen der Vereinigung Österreichischer Bibliothekarinnen und Bibliothekare 73 (2020).
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2020 | Conference Paper | IST-REx-ID: 7803
Simple, deterministic, constant-round coloring in the congested clique
A. Czumaj, P. Davies, M. Parter, in:, Proceedings of the 2020 ACM Symposium on Principles of Distributed Computing (PODC 2020), Association for Computing Machinery, n.d.
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2020 | Journal Article | IST-REx-ID: 7815   OA
Lineage tracing and clonal analysis in developing cerebral cortex using mosaic analysis with double markers (MADM)
R.J. Beattie, C. Streicher, N. Amberg, G.T. Cheung, X. Contreras, A.H. Hansen, S. Hippenmeyer, Journal of Visual Experiments (JoVE) (2020) e61147.
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2020 | Journal Article | IST-REx-ID: 6184   OA
Correlated random matrices: Band rigidity and edge universality
J. Alt, L. Erdös, T.H. Krüger, D.J. Schröder, Annals of Probability 48 (2020) 963–1001.
View | Files available | Download (ext.) | arXiv
 
2020 | Journal Article | IST-REx-ID: 7889
Plants with genetically encoded autoluminescence
T. Mitiouchkina, A.S. Mishin, L. Gonzalez Somermeyer, N.M. Markina, T.V. Chepurnyh, E.B. Guglya, T.A. Karataeva, K.A. Palkina, E.S. Shakhova, L.I. Fakhranurova, S.V. Chekova, A.S. Tsarkova, Y.V. Golubev, V.V. Negrebetsky, S.A. Dolgushin, P.V. Shalaev, D. Shlykov, O.A. Melnik, V.O. Shipunova, S.M. Deyev, A.I. Bubyrev, A.S. Pushin, V.V. Choob, S.V. Dolgov, F.A. Kondrashov, I.V. Yampolsky, K.S. Sarkisyan, Nature Biotechnology (2020).
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2020 | Journal Article | IST-REx-ID: 7877   OA
MAU2 and NIPBL variants impair the heterodimerization of the cohesin loader subunits and cause Cornelia de Lange syndrome
I. Parenti, F. Diab, S.R. Gil, E. Mulugeta, V. Casa, R. Berutti, R.W.W. Brouwer, V. Dupé, J. Eckhold, E. Graf, B. Puisac, F. Ramos, T. Schwarzmayr, M.M. Gines, T. Van Staveren, W.F.J. Van Ijcken, T.M. Strom, J. Pié, E. Watrin, F.J. Kaiser, K.S. Wendt, Cell Reports 31 (2020) 107647.
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2020 | Conference Paper | IST-REx-ID: 7808   OA
How many bits does it take to quantize your neural network?
M. Giacobbe, T.A. Henzinger, M. Lechner, in:, International Conference on Tools and Algorithms for the Construction and Analysis of Systems, Springer Nature, 2020, pp. 79–97.
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2020 | Conference Paper | IST-REx-ID: 7810   OA
Optimal and perfectly parallel algorithms for on-demand data-flow analysis
K. Chatterjee, A.K. Goharshady, R. Ibsen-Jensen, A. Pavlogiannis, in:, European Symposium on Programming, Springer Nature, 2020, pp. 112–140.
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2020 | Thesis | IST-REx-ID: 7896   OA
On the average-case hardness of total search problems
C. Kamath Hosdurg, On the Average-Case Hardness of Total Search Problems, IST Austria, 2020.
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