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2887 Publications

2011 | Preprint | IST-REx-ID: 3339 | OA
Chatterjee, K., De Alfaro, L., & Pritam, R. (2011). Magnifying lens abstraction for stochastic games with discounted and long-run average objectives. ArXiv. ArXiv.
View | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3342 | OA
Chatterjee, K., Henzinger, M., Joglekar, M., & Nisarg, S. (2011). Symbolic algorithms for qualitative analysis of Markov decision processes with Büchi objectives. In G. Gopalakrishnan & S. Qadeer (Eds.) (Vol. 6806, pp. 260–276). Presented at the CAV: Computer Aided Verification, Snowbird, USA: Springer. https://doi.org/10.1007/978-3-642-22110-1_21
View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3343 | OA
Chatterjee, K., & Henzinger, M. (2011). Faster and dynamic algorithms for maximal end component decomposition and related graph problems in probabilistic verification (pp. 1318–1336). Presented at the SODA: Symposium on Discrete Algorithms, San Francisco, USA: SIAM. https://doi.org/10.1137/1.9781611973082.101
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2011 | Conference Paper | IST-REx-ID: 3344
Chatterjee, K. (2011). Graph games with reachability objectives. In G. Delzanno & I. Potapov (Eds.) (Vol. 6945, pp. 1–1). Presented at the RP: Reachability Problems, Genoa, Italy: Springer. https://doi.org/10.1007/978-3-642-24288-5_1
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2011 | Conference Paper | IST-REx-ID: 3345 | OA
Chatterjee, K., & Doyen, L. (2011). Energy and mean-payoff parity Markov Decision Processes (Vol. 6907, pp. 206–218). Presented at the MFCS: Mathematical Foundations of Computer Science, Warsaw, Poland: Springer. https://doi.org/10.1007/978-3-642-22993-0_21
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2011 | Conference Paper | IST-REx-ID: 3346 | OA
Brázdil, T., Brožek, V., Chatterjee, K., Forejt, V., & Kučera, A. (2011). Two views on multiple mean payoff objectives in Markov Decision Processes. Presented at the LICS: Logic in Computer Science, Toronto, Canada: IEEE. https://doi.org/10.1109/LICS.2011.10
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2011 | Conference Paper | IST-REx-ID: 3347 | OA
Chatterjee, K., & Fijalkow, N. (2011). Finitary languages (Vol. 6638, pp. 216–226). Presented at the LATA: Language and Automata Theory and Applications, Tarragona, Spain: Springer. https://doi.org/10.1007/978-3-642-21254-3_16
View | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3348 | OA
Chatterjee, K., & Prabhu, V. (2011). Synthesis of memory efficient real time controllers for safety objectives (pp. 221–230). Presented at the HSCC: Hybrid Systems - Computation and Control, Chicago, USA: Springer. https://doi.org/10.1145/1967701.1967734
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2011 | Conference Paper | IST-REx-ID: 3349 | OA
Chatterjee, K., & Fijalkow, N. (2011). A reduction from parity games to simple stochastic games (Vol. 54, pp. 74–86). Presented at the GandALF: Games, Automata, Logic, and Formal Verification, Minori, Italy: EPTCS. https://doi.org/10.4204/EPTCS.54.6
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2011 | Conference Paper | IST-REx-ID: 3350
Chatterjee, K., & Majumdar, R. (2011). Minimum attention controller synthesis for omega regular objectives. In U. Fahrenberg & S. Tripakis (Eds.) (Vol. 6919, pp. 145–159). Presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Aalborg, Denmark: Springer. https://doi.org/10.1007/978-3-642-24310-3_11
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2011 | Conference Paper | IST-REx-ID: 3351 | OA
Chatterjee, K., Doyen, L., & Singh, R. (2011). On memoryless quantitative objectives. In O. Owe, M. Steffen, & J. A. Telle (Eds.) (Vol. 6914, pp. 148–159). Presented at the FCT: Fundamentals of Computation Theory, Oslo, Norway: Springer. https://doi.org/10.1007/978-3-642-22953-4_13
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2011 | Journal Article | IST-REx-ID: 3352
Fisher, J., Harel, D., & Henzinger, T. A. (2011). Biology as reactivity. Communications of the ACM, 54(10), 72–82. https://doi.org/10.1145/2001269.2001289
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2011 | Journal Article | IST-REx-ID: 3353 | OA
Tripakis, S., Lickly, B., Henzinger, T. A., & Lee, E. (2011). A theory of synchronous relational interfaces. ACM Transactions on Programming Languages and Systems (TOPLAS), 33(4). https://doi.org/10.1145/1985342.1985345
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2011 | Journal Article | IST-REx-ID: 3354
Chatterjee, K., De Alfaro, L., & Henzinger, T. A. (2011). Qualitative concurrent parity games. ACM Transactions on Computational Logic (TOCL), 12(4). https://doi.org/10.1145/1970398.1970404
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2011 | Conference Paper | IST-REx-ID: 3355 | OA
Halalai, R., Henzinger, T. A., & Singh, V. (2011). Quantitative evaluation of BFT protocols (pp. 255–264). Presented at the QEST: Quantitative Evaluation of Systems, Aachen, Germany: IEEE. https://doi.org/10.1109/QEST.2011.40
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2011 | Conference Paper | IST-REx-ID: 3356 | OA
Boker, U., Chatterjee, K., Henzinger, T. A., & Kupferman, O. (2011). Temporal specifications with accumulative values. Presented at the LICS: Logic in Computer Science, Toronto, Canada: IEEE. https://doi.org/10.1109/LICS.2011.33
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2011 | Conference Paper | IST-REx-ID: 3357
Chatterjee, K., Henzinger, T. A., & Horn, F. (2011). The complexity of request-response games. In A.-H. Dediu, S. Inenaga, & C. Martín-Vide (Eds.) (Vol. 6638, pp. 227–237). Presented at the LATA: Language and Automata Theory and Applications, Tarragona, Spain: Springer. https://doi.org/10.1007/978-3-642-21254-3_17
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2011 | Conference Paper | IST-REx-ID: 3358 | OA
Henzinger, T. A., Singh, V., Wies, T., & Zufferey, D. (2011). Scheduling large jobs by abstraction refinement (pp. 329–342). Presented at the EuroSys, Salzburg, Austria: ACM. https://doi.org/10.1145/1966445.1966476
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2011 | Conference Paper | IST-REx-ID: 3359
Cerny, P., & Henzinger, T. A. (2011). From boolean to quantitative synthesis (pp. 149–154). Presented at the EMSOFT: Embedded Software , Taipei; Taiwan: ACM. https://doi.org/10.1145/2038642.2038666
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2011 | Conference Paper | IST-REx-ID: 3360 | OA
Boker, U., & Henzinger, T. A. (2011). Determinizing discounted-sum automata (Vol. 12, pp. 82–96). Presented at the CSL: Computer Science Logic, Bergen, Norway: Springer. https://doi.org/10.4230/LIPIcs.CSL.2011.82
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2011 | Conference Paper | IST-REx-ID: 3361 | OA
Cerny, P., Chatterjee, K., & Henzinger, T. A. (2011). The complexity of quantitative information flow problems (pp. 205–217). Presented at the CSF: Computer Security Foundations, Cernay-la-Ville, France: IEEE. https://doi.org/10.1109/CSF.2011.21
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2011 | Conference Paper | IST-REx-ID: 3362 | OA
Fisher, J., Henzinger, T. A., Nickovic, D., Piterman, N., Singh, A., & Vardi, M. (2011). Dynamic reactive modules (Vol. 6901, pp. 404–418). Presented at the CONCUR: Concurrency Theory, Aachen, Germany: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.1007/978-3-642-23217-6_27
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2011 | Preprint | IST-REx-ID: 3363 | OA
Chatterjee, K., Henzinger, T. A., & Tracol, M. (n.d.). The decidability frontier for probabilistic automata on infinite words. ArXiv.
View | Download Preprint (ext.) | arXiv
 
2011 | Journal Article | IST-REx-ID: 3364 | OA
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2011). Approximation of event probabilities in noisy cellular processes. Theoretical Computer Science, 412(21), 2128–2141. https://doi.org/10.1016/j.tcs.2010.10.022
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
Chatterjee, K., Henzinger, T. A., Jobstmann, B., & Singh, R. (2011). QUASY: quantitative synthesis tool (Vol. 6605, pp. 267–271). Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Saarbrucken, Germany: Springer. https://doi.org/10.1007/978-3-642-19835-9_24
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2011 | Conference Paper | IST-REx-ID: 3366 | OA
Cerny, P., Chatterjee, K., Henzinger, T. A., Radhakrishna, A., & Singh, R. (2011). Quantitative synthesis for concurrent programs. In G. Gopalakrishnan & S. Qadeer (Eds.) (Vol. 6806, pp. 243–259). Presented at the CAV: Computer Aided Verification, Snowbird, USA: Springer. https://doi.org/10.1007/978-3-642-22110-1_20
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2011 | Conference Paper | IST-REx-ID: 3367
Chen, C., & Kerber, M. (2011). An output sensitive algorithm for persistent homology (pp. 207–216). Presented at the SoCG: Symposium on Computational Geometry, Paris, France: ACM. https://doi.org/10.1145/1998196.1998228
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2011 | Journal Article | IST-REx-ID: 3368 | OA
Krens, G., Möllmert, S., & Heisenberg, C.-P. J. (2011). Enveloping cell layer differentiation at the surface of zebrafish germ layer tissue explants. PNAS, 108(3), E9–E10. https://doi.org/10.1073/pnas.1010767108
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2011 | Journal Article | IST-REx-ID: 3369
Pernia-Andrade, A., & Jonas, P. M. (2011). The multiple faces of RIM. Neuron, 69(2), 185–187. https://doi.org/10.1016/j.neuron.2011.01.010
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2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, A. (2011). Consequences of different null models on the tree shape bias of supertree methods. Systematic Biology, 60(2), 218–225. https://doi.org/10.1093/sysbio/syq086
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt, M. K., & Parent, C. (2011). Cells on the move in Philadelphia. Molecular Biology and Evolution, 22(6), 724. https://doi.org/10.1091/mbc.E10-12-0958
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot, P., Abe, J., Alcock, J., Alizon, S., Alpedrinha, J., Andersson, M., … Zink, A. (2011). Inclusive fitness theory and eusociality. Nature, 471(7339), E1–E4. https://doi.org/10.1038/nature09831
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2011 | Journal Article | IST-REx-ID: 3373 | OA
Jahnel, M., Behrndt, M., Jannasch, A., Schaeffer, E., & Grill, S. (2011). Measuring the complete force field of an optical trap. Optics Letters, 36(7), 1260–1262. https://doi.org/10.1364/OL.36.001260
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2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkacik, G., & Walczak, A. (2011). Information transmission in genetic regulatory networks a review. Journal of Physics: Condensed Matter, 23(15). https://doi.org/10.1088/0953-8984/23/15/153102
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2011 | Journal Article | IST-REx-ID: 3375 | OA
de Vladar, H., & Barton, N. H. (2011). The statistical mechanics of a polygenic character under stabilizing selection mutation and drift. Journal of the Royal Society Interface, 8(58), 720–739. https://doi.org/10.1098/rsif.2010.0438
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2011 | Journal Article | IST-REx-ID: 3376 | OA
Bollenbach, M. T., & Kishony, R. (2011). Resolution of gene regulatory conflicts caused by combinations of antibiotics. Molecular Cell, 42(4), 413–425. https://doi.org/10.1016/j.molcel.2011.04.016
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Edelsbrunner, H., Morozov, D., & Patel, A. (2011). Quantifying transversality by measuring the robustness of intersections. Foundations of Computational Mathematics, 11(3), 345–361. https://doi.org/10.1007/s10208-011-9090-8
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2011 | Journal Article | IST-REx-ID: 3378
Bendich, P., & Harer, J. (2011). Persistent intersection homology. Foundations of Computational Mathematics, 11(3), 305–336. https://doi.org/10.1007/s10208-010-9081-1
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Row, R., Maître, J.-L., Martin, B., Stockinger, P., Heisenberg, C.-P. J., & Kimelman, D. (2011). Completion of the epithelial to mesenchymal transition in zebrafish mesoderm requires Spadetail. Developmental Biology, 354(1), 102–110. https://doi.org/10.1016/j.ydbio.2011.03.025
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Logeswaran, S., & Barton, N. H. (2011). Mapping Mendelian traits in asexual progeny using changes in marker allele frequency. Genetical Research, 93(3), 221–232. https://doi.org/10.1017/S0016672311000115
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2011 | Journal Article | IST-REx-ID: 3381 | OA
Henzinger, T. A., Jobstmann, B., & Wolf, V. (2011). Formalisms for specifying Markovian population models. IJFCS: International Journal of Foundations of Computer Science, 22(4), 823–841. https://doi.org/10.1142/S0129054111008441
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2011 | Journal Article | IST-REx-ID: 3382
Kroemer, O., Lampert, C., & Peters, J. (2011). Learning dynamic tactile sensing with robust vision based training. IEEE Transactions on Robotics, 27(3), 545–557. https://doi.org/10.1109/TRO.2011.2121130
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2011 | Journal Article | IST-REx-ID: 3383
Heisenberg, C.-P. J. (2011). Invited Lectures ‐ Symposia Area. FEBS Journal, 278(S1), 24–24. https://doi.org/10.1111/j.1742-4658.2011.08136.x
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2011 | Journal Article | IST-REx-ID: 3384 | OA
Tkačik, G., Garrigan, P., Ratliff, C., Milcinski, G., Klein, J., Seyfarth, L., … Balasubramanian, V. (2011). Natural images from the birthplace of the human eye. PLoS One, 6(6). https://doi.org/10.1371/journal.pone.0020409
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2011 | Journal Article | IST-REx-ID: 3385
Sixt, M. K. (2011). Interstitial locomotion of leukocytes. Immunology Letters, 138(1), 32–34. https://doi.org/10.1016/j.imlet.2011.02.013
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2011 | Journal Article | IST-REx-ID: 3386
Schrempf, A., Cremer, S., & Heinze, J. (2011). Social influence on age and reproduction reduced lifespan and fecundity in multi queen ant colonies. Journal of Evolutionary Biology, 24(7), 1455–1461. https://doi.org/10.1111/j.1420-9101.2011.02278.x
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2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok, A. (2011). Split based computation of majority rule supertrees. BMC Evolutionary Biology, 11(205). https://doi.org/10.1186/1471-2148-11-205
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2011 | Journal Article | IST-REx-ID: 3388 | OA
Ugelvig, L. V., Nielsen, P., Boomsma, J., & Nash, D. (2011). Reconstructing eight decades of genetic variation in an isolated Danish population of the large blue butterfly Maculinea arion. BMC Evolutionary Biology, 11(201). https://doi.org/10.1186/1471-2148-11-201
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2011 | Journal Article | IST-REx-ID: 3389
Blaschko, M., Shelton, J., Bartels, A., Lampert, C., & Gretton, A. (2011). Semi supervised kernel canonical correlation analysis with application to human fMRI. Pattern Recognition Letters, 32(11), 1572–1583. https://doi.org/10.1016/j.patrec.2011.02.011
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, N. H., & Etheridge, A. (2011). The relation between reproductive value and genetic contribution. Genetics, 188(4), 953–973. https://doi.org/10.1534/genetics.111.127555
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