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2800 Publications

2011 | Conference Paper | IST-REx-ID: 3358 | OA
Henzinger, T. A., Singh, V., Wies, T., & Zufferey, D. (2011). Scheduling large jobs by abstraction refinement (pp. 329–342). Presented at the EuroSys, Salzburg, Austria: ACM. https://doi.org/10.1145/1966445.1966476
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2011 | Conference Paper | IST-REx-ID: 3359
Cerny, P., & Henzinger, T. A. (2011). From boolean to quantitative synthesis (pp. 149–154). Presented at the EMSOFT: Embedded Software , Taipei; Taiwan: ACM. https://doi.org/10.1145/2038642.2038666
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2011 | Conference Paper | IST-REx-ID: 3360 | OA
Boker, U., & Henzinger, T. A. (2011). Determinizing discounted-sum automata (Vol. 12, pp. 82–96). Presented at the CSL: Computer Science Logic, Bergen, Norway: Springer. https://doi.org/10.4230/LIPIcs.CSL.2011.82
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2011 | Conference Paper | IST-REx-ID: 3361 | OA
Cerny, P., Chatterjee, K., & Henzinger, T. A. (2011). The complexity of quantitative information flow problems (pp. 205–217). Presented at the CSF: Computer Security Foundations, Cernay-la-Ville, France: IEEE. https://doi.org/10.1109/CSF.2011.21
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2011 | Conference Paper | IST-REx-ID: 3362 | OA
Fisher, J., Henzinger, T. A., Nickovic, D., Piterman, N., Singh, A., & Vardi, M. (2011). Dynamic reactive modules (Vol. 6901, pp. 404–418). Presented at the CONCUR: Concurrency Theory, Aachen, Germany: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.1007/978-3-642-23217-6_27
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2011 | Preprint | IST-REx-ID: 3363 | OA
Chatterjee, K., Henzinger, T. A., & Tracol, M. (n.d.). The decidability frontier for probabilistic automata on infinite words. ArXiv.
View | Download Preprint (ext.) | arXiv
 
2011 | Journal Article | IST-REx-ID: 3364 | OA
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2011). Approximation of event probabilities in noisy cellular processes. Theoretical Computer Science, 412(21), 2128–2141. https://doi.org/10.1016/j.tcs.2010.10.022
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
Chatterjee, K., Henzinger, T. A., Jobstmann, B., & Singh, R. (2011). QUASY: quantitative synthesis tool (Vol. 6605, pp. 267–271). Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Saarbrucken, Germany: Springer. https://doi.org/10.1007/978-3-642-19835-9_24
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2011 | Conference Paper | IST-REx-ID: 3366 | OA
Cerny, P., Chatterjee, K., Henzinger, T. A., Radhakrishna, A., & Singh, R. (2011). Quantitative synthesis for concurrent programs. In G. Gopalakrishnan & S. Qadeer (Eds.) (Vol. 6806, pp. 243–259). Presented at the CAV: Computer Aided Verification, Snowbird, USA: Springer. https://doi.org/10.1007/978-3-642-22110-1_20
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2011 | Conference Paper | IST-REx-ID: 3367
Chen, C., & Kerber, M. (2011). An output sensitive algorithm for persistent homology (pp. 207–216). Presented at the SoCG: Symposium on Computational Geometry, Paris, France: ACM. https://doi.org/10.1145/1998196.1998228
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2011 | Journal Article | IST-REx-ID: 3368 | OA
Krens, G., Möllmert, S., & Heisenberg, C.-P. J. (2011). Enveloping cell layer differentiation at the surface of zebrafish germ layer tissue explants. PNAS, 108(3), E9–E10. https://doi.org/10.1073/pnas.1010767108
View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2011 | Journal Article | IST-REx-ID: 3369
Pernia-Andrade, A., & Jonas, P. M. (2011). The multiple faces of RIM. Neuron, 69(2), 185–187. https://doi.org/10.1016/j.neuron.2011.01.010
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2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, A. (2011). Consequences of different null models on the tree shape bias of supertree methods. Systematic Biology, 60(2), 218–225. https://doi.org/10.1093/sysbio/syq086
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt, M. K., & Parent, C. (2011). Cells on the move in Philadelphia. Molecular Biology and Evolution, 22(6), 724. https://doi.org/10.1091/mbc.E10-12-0958
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot, P., Abe, J., Alcock, J., Alizon, S., Alpedrinha, J., Andersson, M., … Zink, A. (2011). Inclusive fitness theory and eusociality. Nature, 471(7339), E1–E4. https://doi.org/10.1038/nature09831
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2011 | Journal Article | IST-REx-ID: 3373 | OA
Jahnel, M., Behrndt, M., Jannasch, A., Schaeffer, E., & Grill, S. (2011). Measuring the complete force field of an optical trap. Optics Letters, 36(7), 1260–1262. https://doi.org/10.1364/OL.36.001260
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2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkacik, G., & Walczak, A. (2011). Information transmission in genetic regulatory networks a review. Journal of Physics: Condensed Matter, 23(15). https://doi.org/10.1088/0953-8984/23/15/153102
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2011 | Journal Article | IST-REx-ID: 3375 | OA
de Vladar, H., & Barton, N. H. (2011). The statistical mechanics of a polygenic character under stabilizing selection mutation and drift. Journal of the Royal Society Interface, 8(58), 720–739. https://doi.org/10.1098/rsif.2010.0438
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2011 | Journal Article | IST-REx-ID: 3376 | OA
Bollenbach, M. T., & Kishony, R. (2011). Resolution of gene regulatory conflicts caused by combinations of antibiotics. Molecular Cell, 42(4), 413–425. https://doi.org/10.1016/j.molcel.2011.04.016
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Edelsbrunner, H., Morozov, D., & Patel, A. (2011). Quantifying transversality by measuring the robustness of intersections. Foundations of Computational Mathematics, 11(3), 345–361. https://doi.org/10.1007/s10208-011-9090-8
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2011 | Journal Article | IST-REx-ID: 3378
Bendich, P., & Harer, J. (2011). Persistent intersection homology. Foundations of Computational Mathematics, 11(3), 305–336. https://doi.org/10.1007/s10208-010-9081-1
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2011 | Journal Article | IST-REx-ID: 3379 | OA
Row, R., Maître, J.-L., Martin, B., Stockinger, P., Heisenberg, C.-P. J., & Kimelman, D. (2011). Completion of the epithelial to mesenchymal transition in zebrafish mesoderm requires Spadetail. Developmental Biology, 354(1), 102–110. https://doi.org/10.1016/j.ydbio.2011.03.025
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2011 | Journal Article | IST-REx-ID: 3380 | OA
Logeswaran, S., & Barton, N. H. (2011). Mapping Mendelian traits in asexual progeny using changes in marker allele frequency. Genetical Research, 93(3), 221–232. https://doi.org/10.1017/S0016672311000115
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2011 | Journal Article | IST-REx-ID: 3381 | OA
Henzinger, T. A., Jobstmann, B., & Wolf, V. (2011). Formalisms for specifying Markovian population models. IJFCS: International Journal of Foundations of Computer Science, 22(4), 823–841. https://doi.org/10.1142/S0129054111008441
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2011 | Journal Article | IST-REx-ID: 3382
Kroemer, O., Lampert, C., & Peters, J. (2011). Learning dynamic tactile sensing with robust vision based training. IEEE Transactions on Robotics, 27(3), 545–557. https://doi.org/10.1109/TRO.2011.2121130
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2011 | Journal Article | IST-REx-ID: 3383
Heisenberg, C.-P. J. (2011). Invited Lectures ‐ Symposia Area. FEBS Journal, 278(S1), 24–24. https://doi.org/10.1111/j.1742-4658.2011.08136.x
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2011 | Journal Article | IST-REx-ID: 3384 | OA
Tkačik, G., Garrigan, P., Ratliff, C., Milcinski, G., Klein, J., Seyfarth, L., … Balasubramanian, V. (2011). Natural images from the birthplace of the human eye. PLoS One, 6(6). https://doi.org/10.1371/journal.pone.0020409
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2011 | Journal Article | IST-REx-ID: 3385
Sixt, M. K. (2011). Interstitial locomotion of leukocytes. Immunology Letters, 138(1), 32–34. https://doi.org/10.1016/j.imlet.2011.02.013
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2011 | Journal Article | IST-REx-ID: 3386
Schrempf, A., Cremer, S., & Heinze, J. (2011). Social influence on age and reproduction reduced lifespan and fecundity in multi queen ant colonies. Journal of Evolutionary Biology, 24(7), 1455–1461. https://doi.org/10.1111/j.1420-9101.2011.02278.x
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2011 | Journal Article | IST-REx-ID: 3387 | OA
Kupczok, A. (2011). Split based computation of majority rule supertrees. BMC Evolutionary Biology, 11(205). https://doi.org/10.1186/1471-2148-11-205
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2011 | Journal Article | IST-REx-ID: 3388 | OA
Ugelvig, L. V., Nielsen, P., Boomsma, J., & Nash, D. (2011). Reconstructing eight decades of genetic variation in an isolated Danish population of the large blue butterfly Maculinea arion. BMC Evolutionary Biology, 11(201). https://doi.org/10.1186/1471-2148-11-201
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2011 | Journal Article | IST-REx-ID: 3389
Blaschko, M., Shelton, J., Bartels, A., Lampert, C., & Gretton, A. (2011). Semi supervised kernel canonical correlation analysis with application to human fMRI. Pattern Recognition Letters, 32(11), 1572–1583. https://doi.org/10.1016/j.patrec.2011.02.011
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, N. H., & Etheridge, A. (2011). The relation between reproductive value and genetic contribution. Genetics, 188(4), 953–973. https://doi.org/10.1534/genetics.111.127555
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2011 | Journal Article | IST-REx-ID: 3391 | OA
de Vladar, H., & Barton, N. H. (2011). The contribution of statistical physics to evolutionary biology. Trends in Ecology and Evolution, 26(8), 424–432. https://doi.org/10.1016/j.tree.2011.04.002
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2011 | Journal Article | IST-REx-ID: 3392
Soriano, S., Hons, M., Schumann, K., Kumar, V., Dennier, T., Lyck, R., … Stein, J. (2011). In vivo analysis of uropod function during physiological T cell trafficking. Journal of Immunology, 187(5), 2356–2364. https://doi.org/10.4049/jimmunol.1100935
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2011 | Journal Article | IST-REx-ID: 3393 | OA
Barton, N. H., & Turelli, M. (2011). Spatial waves of advance with bistable dynamics: Cytoplasmic and genetic analogues of Allee effects. American Naturalist, 178(3), E48–E75. https://doi.org/10.1086/661246
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2011 | Journal Article | IST-REx-ID: 3394 | OA
Polechova, J., & Barton, N. H. (2011). Genetic drift widens the expected cline but narrows the expected cline width. Genetics, 189(1), 227–235. https://doi.org/10.1534/genetics.111.129817
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2011 | Journal Article | IST-REx-ID: 3395
Palero, F., Abello, P., Macpherson, E., Beaumont, M., & Pascual, M. (2011). Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster Palinurus elephas . Biological Journal of the Linnean Society, 104(2), 407–418. https://doi.org/10.1111/j.1095-8312.2011.01728.x
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Stockinger, P., Heisenberg, C.-P. J., & Maître, J.-L. (2011). Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube. Development, 138(21), 4673–4683. https://doi.org/10.1242/dev.071233
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2011 | Journal Article | IST-REx-ID: 3397 | OA
Maître, J.-L., & Heisenberg, C.-P. J. (2011). The role of adhesion energy in controlling cell-cell contacts. Current Opinion in Cell Biology, 23(5), 508–514. https://doi.org/10.1016/j.ceb.2011.07.004
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2011 | Journal Article | IST-REx-ID: 3399 | OA
Cremer, S., Schrempf, A., & Heinze, J. (2011). Competition and opportunity shape the reproductive tactics of males in the ant Cardiocondyla obscurior. PLoS One, 6(3). https://doi.org/10.1371/journal.pone.0017323
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2011 | Journal Article | IST-REx-ID: 3405 | OA
Janovjak, H. L., Sandoz, G., & Isacoff, E. (2011). Modern ionotropic glutamate receptor with a K+ selectivity signature sequence. Nature Communications, 2(232), 1–6. https://doi.org/10.1038/ncomms1231
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2011 | Journal Article | IST-REx-ID: 3429
Plachta, N., Bollenbach, M. T., Pease, S., Fraser, S., & Pantazis, P. (2011). Oct4 kinetics predict cell lineage patterning in the early mammalian embryo. Nature Cell Biology, 13(2), 117–123. https://doi.org/10.1038/ncb2154
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2011 | Journal Article | IST-REx-ID: 3505 | OA
Sixt, M. K., & Lämmermann, T. (2011). In vitro analysis of chemotactic leukocyte migration in 3D environments. Cell Migration, 769, 149–165. https://doi.org/10.1007/978-1-61779-207-6_11
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2011 | Journal Article | IST-REx-ID: 3771
Pavan, A., Martins, F., Santos, F., Ditchfield, A., & Fernandes Redondo, R. A. (2011). Patterns of diversification in two species of short-tailed bats (Carollia Gray, 1838): the effects of historical fragmentation of Brazilian rainforests. Biological Journal of the Linnean Society, 102(3), 527–539. https://doi.org/10.1111/j.1095-8312.2010.01601.x
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2011 | Journal Article | IST-REx-ID: 3778 | OA
Barton, N. H. (2011). Estimating linkage disequilibria. Heredity, 106(2), 205–206. https://doi.org/10.1038/hdy.2010.67
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2011 | Journal Article | IST-REx-ID: 3781
Fasy, B. T. (2011). The difference in length of curves in R^n. Acta Sci. Math. (Szeged), 77(1–2), 359–367.
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2011 | Journal Article | IST-REx-ID: 3784 | OA
Palero, F., Guerao, G., Clark, P., & Abello, P. (2011). Scyllarus arctus (Crustacea: Decapoda: Scyllaridae) final stage phyllosoma identified by DNA analysis, with morphological description. Journal of the Marine Biological Association of the United Kingdom, 91(2), 485–492. https://doi.org/10.1017/S0025315410000287
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2011 | Book Chapter | IST-REx-ID: 3791
Krens, G., & Heisenberg, C.-P. J. (2011). Cell sorting in development. In M. Labouesse (Ed.), Current Topics in Developmental Biology (Vol. 95, pp. 189–213). Elsevier. https://doi.org/10.1016/B978-0-12-385065-2.00006-2
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
Edelsbrunner, H., & Kerber, M. (2011). Covering and packing with spheres by diagonal distortion in R^n. In C. Calude, G. Rozenberg, & A. Salomaa (Eds.), Rainbow of Computer Science (Vol. 6570, pp. 20–35). Springer. https://doi.org/10.1007/978-3-642-19391-0_2
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