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263 Publications

2014 | Conference Paper | IST-REx-ID: 2905 | OA
Edelsbrunner H, Morozovy D. 2014. Persistent homology: Theory and practice. ECM: European Congress of Mathematics, 31–50.
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2014 | Conference Paper | IST-REx-ID: 10892
Biedl T, Huber S, Palfrader P. 2014. Planar matchings for weighted straight skeletons. 25th International Symposium, ISAAC 2014. ISAAC: International Symposium on Algorithms and Computation, LNCS, vol. 8889, 117–127.
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2014 | Book | IST-REx-ID: 6853
Edelsbrunner H. 2014. A Short Course in Computational Geometry and Topology 1st ed., Cham: Springer Nature, IX, 110p.
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2014 | Conference Paper | IST-REx-ID: 10886
Zobel V, Reininghaus J, Hotz I. 2014. Visualization of two-dimensional symmetric positive definite tensor fields using the heat kernel signature. Topological Methods in Data Analysis and Visualization III . , Mathematics and Visualization, , 249–262.
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2014 | Book Chapter | IST-REx-ID: 10817
Günther D, Reininghaus J, Seidel H-P, Weinkauf T. 2014.Notes on the simplification of the Morse-Smale complex. In: Topological Methods in Data Analysis and Visualization III. , 135–150.
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2014 | Journal Article | IST-REx-ID: 2255 | OA
Edelsbrunner H, Pausinger F. 2014. Stable length estimates of tube-like shapes. Journal of Mathematical Imaging and Vision. 50(1), 164–177.
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2014 | Conference Paper | IST-REx-ID: 10894
Bauer U, Kerber M, Reininghaus J, Wagner H. 2014. PHAT – Persistent Homology Algorithms Toolbox. ICMS 2014: International Congress on Mathematical Software. ICMS: International Congress on Mathematical SoftwareLNCS vol. 8592, 137–143.
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2014 | Preprint | IST-REx-ID: 2012 | OA
Iglesias Ham M, Kerber M, Uhler C. Sphere packing with limited overlap. arXiv, 1401.0468.
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2013 | Conference Paper | IST-REx-ID: 2209
Biedl T, Held M, Huber S. 2013. Recognizing straight skeletons and Voronoi diagrams and reconstructing their input. ISVD: Voronoi Diagrams in Science and Engineering, 2013 10th International Symposium on Voronoi Diagrams in Science and Engineering (ISVD 2013) , , 37–46.
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2013 | Conference Paper | IST-REx-ID: 2210 | OA
Biedl T, Held M, Huber S. 2013. Reconstructing polygons from embedded straight skeletons. 29th European Workshop on Computational Geometry. EuroCG: European Workshop on Computational Geometry, 95–98.
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2013 | Journal Article | IST-REx-ID: 2304
Pausinger F. 2013. Van der Corput sequences and linear permutations. Electronic Notes in Discrete Mathematics. 43, 43–50.
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2013 | Conference Paper | IST-REx-ID: 2807 | OA
Čadek M, Krcál M, Matoušek J, Vokřínek L, Wagner U. 2013. Extending continuous maps: Polynomiality and undecidability. 45th Annual ACM Symposium on theory of computing. STOC: Symposium on the Theory of Computing, 595–604.
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2013 | Conference Paper | IST-REx-ID: 2812 | OA
Attali D, Bauer U, Devillers O, Glisse M, Lieutier A. 2013. Homological reconstruction and simplification in R3. Proceedings of the 29th annual symposium on Computational Geometry. SoCG: Symposium on Computational Geometry, 117–125.
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2013 | Journal Article | IST-REx-ID: 2822 | OA
Topp C, Iyer Pascuzzi A, Anderson J, Lee C, Zurek P, Symonova O, Zheng Y, Bucksch A, Mileyko Y, Galkovskyi T, Moore B, Harer J, Edelsbrunner H, Mitchell Olds T, Weitz J, Benfey P. 2013. 3D phenotyping and quantitative trait locus mapping identify core regions of the rice genome controlling root architecture. PNAS. 110(18), E1695–E1704.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 
2013 | Conference Paper | IST-REx-ID: 2843
Edelsbrunner H, Pausinger F. 2013. Stable length estimates of tube-like shapes. 17th IAPR International Conference on Discrete Geometry for Computer Imagery. DGCI: Discrete Geometry for Computer Imagery, LNCS, vol. 7749, XV–XIX.
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2013 | Journal Article | IST-REx-ID: 2859 | OA
Bendich P, Edelsbrunner H, Morozov D, Patel A. 2013. Homology and robustness of level and interlevel sets. Homology, Homotopy and Applications. 15(1), 51–72.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2013 | Journal Article | IST-REx-ID: 2887 | OA
Fang S, Clark R, Zheng Y, Iyer Pascuzzi A, Weitz J, Kochian L, Edelsbrunner H, Liao H, Benfey P. 2013. Genotypic recognition and spatial responses by rice roots. PNAS. 110(7), 2670–2675.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 
2013 | Conference Paper | IST-REx-ID: 2901 | OA
Chen C, Kolmogorov V, Yan Z, Metaxas D, Lampert C. 2013. Computing the M most probable modes of a graphical model. AISTATS: Conference on Uncertainty in Artificial Intelligence, JMLR: W&CP, vol. 31, 161–169.
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2013 | Conference Paper | IST-REx-ID: 2906 | OA
Kerber M, Edelsbrunner H. 2013. 3D kinetic alpha complexes and their implementation. 2013 Proceedings of the 15th Workshop on Algorithm Engineering and Experiments. ALENEX: Algorithm Engineering and Experiments, ALENEX, , 70–77.
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2013 | Journal Article | IST-REx-ID: 2815 | OA
Edelsbrunner H, Fasy BT, Rote G. 2013. Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions. Discrete & Computational Geometry. 49(4), 797–822.
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2013 | Journal Article | IST-REx-ID: 2939
Chen C, Kerber M. 2013. An output sensitive algorithm for persistent homology. Computational Geometry: Theory and Applications. 46(4), 435–447.
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2013 | Conference Paper | IST-REx-ID: 10897
Edelsbrunner H. 2013. Persistent homology in image processing. Graph-Based Representations in Pattern Recognition. GbRPR: Graph-based Representations in Pattern RecognitionLNCS vol. 7877, 182–183.
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2012 | Journal Article | IST-REx-ID: 2849 | OA
Edelsbrunner H, Strelkova N. 2012. On the configuration space of Steiner minimal trees. Russian Mathematical Surveys. 67(6), 1167–1168.
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2012 | Conference Paper | IST-REx-ID: 2903 | OA
Edelsbrunner H, Symonova O. 2012. The adaptive topology of a digital image. ISVD: International Symposium on Voronoi Diagrams in Science and Engineering, 41–48.
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2012 | Journal Article | IST-REx-ID: 2941 | OA
Dolbilin N, Edelsbrunner H, Musin O. 2012. On the optimality of functionals over triangulations of Delaunay sets. Russian Mathematical Surveys. 67(4), 781–783.
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2012 | Conference Paper | IST-REx-ID: 2971
Zankl G, Haxhimusa Y, Ion A. 2012. Interactive labeling of image segmentation hierarchies. Pattern Recognition vol. 7476, 11–20.
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2012 | Journal Article | IST-REx-ID: 3120 | OA
Brown G, Kerber M, Reid M. 2012. Fano 3 folds in codimension 4 Tom and Jerry Part I. Compositio Mathematica. 148(4), 1171–1194.
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2012 | Conference Paper | IST-REx-ID: 3133 | OA
Edelsbrunner H, Kerber M. 2012. Alexander duality for functions: The persistent behavior of land and water and shore. Proceedings of the twenty-eighth annual symposium on Computational geometry . SCG: Symposium on Computational Geometry, 249–258.
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2012 | Conference Paper | IST-REx-ID: 3134
Edelsbrunner H, Fasy B, Rote G. 2012. Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions. Proceedings of the twenty-eighth annual symposium on Computational geometry . SCG: Symposium on Computational Geometry, 91–100.
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2012 | Journal Article | IST-REx-ID: 3256 | OA
Edelsbrunner H, Kerber M. 2012. Dual complexes of cubical subdivisions of ℝn. Discrete & Computational Geometry. 47(2), 393–414.
[Submitted Version] View | Files available | DOI
 
2012 | Conference Paper | IST-REx-ID: 3265
Ion A, Carreira J, Sminchisescu C. 2012. Image segmentation by figure-ground composition into maximal cliques. ICCV: International Conference on Computer Vision, 6126486.
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2012 | Journal Article | IST-REx-ID: 3115 | OA
Berberich E, Halperin D, Kerber M, Pogalnikova R. 2012. Deconstructing approximate offsets. Discrete & Computational Geometry. 48(4), 964–989.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2012 | Journal Article | IST-REx-ID: 3331 | OA
Kerber M, Sagraloff M. 2012. A worst case bound for topology computation of algebraic curves. Journal of Symbolic Computation. 47(3), 239–258.
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2012 | Conference Paper | IST-REx-ID: 3129 | OA
Busaryev O, Cabello S, Chen C, Dey T, Wang Y. 2012. Annotating simplices with a homology basis and its applications. SWAT: Symposium and Workshops on Algorithm Theory, LNCS, vol. 7357, 189–200.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2012 | Journal Article | IST-REx-ID: 3159 | OA
Mileyko Y, Edelsbrunner H, Price C, Weitz J. 2012. Hierarchical ordering of reticular networks. PLoS One. 7(6), e36715.
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2012 | Journal Article | IST-REx-ID: 3310 | OA
Bendich P, Cabello S, Edelsbrunner H. 2012. A point calculus for interlevel set homology. Pattern Recognition Letters. 33(11), 1436–1444.
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2012 | Journal Article | IST-REx-ID: 6588 | OA
Pausinger F. 2012. Elementary solutions of the Bernstein problem on two intervals. Journal of Mathematical Physics, Analysis, Geometry. 8(1), 63–78.
[Published Version] View | Download Published Version (ext.) | WoS
 
2012 | Journal Article | IST-REx-ID: 2912
Edelsbrunner H, Strelkova N. 2012. On the configuration space for the shortest networks. Russian Mathematical Surveys. 67(6), 1167–1168.
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2012 | Conference Paper | IST-REx-ID: 3127 | OA
Quadrianto N, Lampert C, Chen C. 2012. The most persistent soft-clique in a set of sampled graphs. Proceedings of the 29th International Conference on Machine Learning. ICML: International Conference on Machine Learning, 211–218.
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2012 | Journal Article | IST-REx-ID: 2904 | OA
Pausinger F. 2012. Weak multipliers for generalized van der Corput sequences. Journal de Theorie des Nombres des Bordeaux. 24(3), 729–749.
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2012 | Journal Article | IST-REx-ID: 2902 | OA
Edelsbrunner H, Musin O, Ukhalov A, Yakimova O, Alexeev V, Bogaevskaya V, Gorohov A, Preobrazhenskaya M. 2012. Fractal and computational geometry for generalizing cartographic objects. Modeling and Analysis of Information Systems. 19(6), 152–160.
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2011 | Conference Paper | IST-REx-ID: 3266
Ion A, Carreira J, Sminchisescu C. 2011. Probabilistic joint image segmentation and labeling. NIPS Proceedings. NIPS: Neural Information Processing Systems vol. 24, 1827–1835.
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2011 | Journal Article | IST-REx-ID: 3269 | OA
Sheng Y, Cutler B, Chen C, Nasman J. 2011. Perceptual global illumination cancellation in complex projection environments. Computer Graphics Forum. 30(4), 1261–1268.
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2011 | Journal Article | IST-REx-ID: 3267
Chen C, Freedman D. 2011. Hardness results for homology localization. Discrete & Computational Geometry. 45(3), 425–448.
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2011 | Book Chapter | IST-REx-ID: 3335 | OA
Van De Weygaert R, Vegter G, Edelsbrunner H, Jones B, Pranav P, Park C, Hellwing W, Eldering B, Kruithof N, Bos P, Hidding J, Feldbrugge J, Ten Have E, Van Engelen M, Caroli M, Teillaud M. 2011.Alpha, Betti and the Megaparsec Universe: On the topology of the Cosmic Web. In: Transactions on Computational Science XIV. LNCS, vol. 6970, 60–101.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3329 | OA
Berberich E, Halperin D, Kerber M, Pogalnikova R. 2011. Deconstructing approximate offsets. Proceedings of the twenty-seventh annual symposium on Computational geometry. SCG: Symposium on Computational Geometry, 187–196.
[Preprint] View | Files available | DOI | Download Preprint (ext.)
 
2011 | Journal Article | IST-REx-ID: 3332 | OA
Kerber M, Sagraloff M. 2011. A note on the complexity of real algebraic hypersurfaces. Graphs and Combinatorics. 27(3), 419–430.
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2011 | Conference Paper | IST-REx-ID: 3330 | OA
Kerber M, Sagraloff M. 2011. Root refinement for real polynomials. ISSAC: International Symposium on Symbolic and Algebraic Computation, 209–216.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 
2011 | Conference Paper | IST-REx-ID: 3328 | OA
Berberich E, Hemmer M, Kerber M. 2011. A generic algebraic kernel for non linear geometric applications. SCG: Symposium on Computational Geometry, 179–186.
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2011 | Journal Article | IST-REx-ID: 3334
Edelsbrunner H, Pach J, Ziegler G. 2011. Letter from the new editors-in-chief. Discrete & Computational Geometry. 45(1), 1–2.
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2011 | Conference Paper | IST-REx-ID: 3367
Chen C, Kerber M. 2011. An output sensitive algorithm for persistent homology. SoCG: Symposium on Computational Geometry, 207–216.
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2011 | Journal Article | IST-REx-ID: 3781
Fasy BT. 2011. The difference in length of curves in R^n. Acta Sci. Math. (Szeged). 77(1–2), 359–367.
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2011 | Book Chapter | IST-REx-ID: 3796 | OA
Edelsbrunner H, Kerber M. 2011.Covering and packing with spheres by diagonal distortion in R^n. In: Rainbow of Computer Science. LNCS, vol. 6570, 20–35.
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2011 | Journal Article | IST-REx-ID: 3965
Wang B, Edelsbrunner H, Morozov D. 2011. Computing elevation maxima by searching the Gauss sphere. Journal of Experimental Algorithmics. 16(2.2), 1–13.
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2011 | Book Chapter | IST-REx-ID: 3271
Wagner H, Chen C, Vuçini E. 2011.Efficient computation of persistent homology for cubical data. In: Topological Methods in Data Analysis and Visualization II. Theory, Algorithms, and Applications, , 91–106.
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2011 | Conference Paper | IST-REx-ID: 3270
Chen C, Kerber M. 2011. Persistent homology computation with a twist. EuroCG: European Workshop on Computational Geometry, 197–200.
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2011 | Conference Poster | IST-REx-ID: 3312 | OA
Zheng Y, Gu S, Edelsbrunner H, Tomasi C, Benfey P. 2011. Detailed reconstruction of 3D plant root shape, IEEE,p.
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2011 | Conference Paper | IST-REx-ID: 3313 | OA
Chen C, Edelsbrunner H. 2011. Diffusion runs low on persistence fast. Proceedings of the IEEE International Conference on Computer Vision. ICCV: International Conference on Computer Vision, 6126271.
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2011 | Book Chapter | IST-REx-ID: 3311 | OA
Edelsbrunner H.Alpha shapes - a survey. In: Tessellations in the Sciences: Virtues, Techniques and Applications of Geometric Tilings. .
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2011 | Journal Article | IST-REx-ID: 3377 | OA
Edelsbrunner H, Morozov D, Patel A. 2011. Quantifying transversality by measuring the robustness of intersections. Foundations of Computational Mathematics. 11(3), 345–361.
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2011 | Journal Article | IST-REx-ID: 3378
Bendich P, Harer J. 2011. Persistent intersection homology. Foundations of Computational Mathematics. 11(3), 305–336.
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2011 | Conference Paper | IST-REx-ID: 3336
Chen C, Freedman D, Lampert C. 2011. Enforcing topological constraints in random field image segmentation. CVPR: Computer Vision and Pattern Recognition. CVPR: Conference on Computer Vision and Pattern Recognition, 2089–2096.
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2011 | Conference Paper | IST-REx-ID: 9648 | OA
Gonzalez-Diaz R, Ion A, Jimenez MJ, Poyatos R. 2011. Incremental-decremental algorithm for computing AT-models and persistent homology. Computer Analysis of Images and Patterns. CAIP: International Conference on Computer Analysis of Images and Patterns, LNCS, vol. 6854, 286–293.
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2011 | Conference Paper | IST-REx-ID: 10907
Artner NM, Ion A, Kropatsch WG. 2011. Spatio-temporal extraction of articulated models in a graph pyramid. Graph-Based Representations in Pattern Recognition. GbRPR: Graph-based Representations in Pattern RecognitionLNIP, LNCS, vol. 6658, 215–224.
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2010 | Conference Paper | IST-REx-ID: 10909
Chen C, Freedman D. 2010. Hardness results for homology localization. Proceedings of the 2010 Annual ACM-SIAM Symposium on Discrete Algorithms. SODA: Symposium on Discrete Algorithms, 1594–1604.
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2010 | Conference Paper | IST-REx-ID: 3782
Chen C, Freedman D. 2010. Topology noise removal for curve  and surface evolution. Conference proceedings MCV 2010. MCV: Medical Computer Vision, LNCS, vol. 6533, 31–42.
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2010 | Book Chapter | IST-REx-ID: 3795 | OA
Edelsbrunner H, Morozov D, Patel A. 2010.The stability of the apparent contour of an orientable 2-manifold. In: Topological Data Analysis and Visualization: Theory, Algorithms and Applications. Mathematics and Visualization, , 27–42.
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2010 | Conference Paper | IST-REx-ID: 3848
Bendich P, Edelsbrunner H, Morozov D, Patel A. 2010. The robustness of level sets. ESA: European Symposium on Algorithms, LNCS, vol. 6346, 1–10.
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2010 | Conference Paper | IST-REx-ID: 3853 | OA
Chatterjee K, Doyen L, Edelsbrunner H, Henzinger TA, Rannou P. 2010. Mean-payoff automaton expressions. CONCUR: Concurrency Theory, LNCS, vol. 6269, 269–283.
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2010 | Conference Paper | IST-REx-ID: 3849 | OA
Bendich P, Edelsbrunner H, Kerber M, Patel A. 2010. Persistent homology under non-uniform error. MFCS: Mathematical Foundations of Computer Science, LNCS, vol. 6281, 12–23.
[Submitted Version] View | Files available | DOI
 
2010 | Conference Paper | IST-REx-ID: 3850
Berberich E, Halperin D, Kerber M, Pogalnikova R. 2010. Polygonal reconstruction from approximate offsets. EuroCG: European Workshop on Computational Geometry, 12–23.
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2010 | Journal Article | IST-REx-ID: 3901 | OA
Bendich P, Edelsbrunner H, Kerber M. 2010. Computing robustness and persistence for images. IEEE Transactions of Visualization and Computer Graphics. 16(6), 1251–1260.
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2009 | Conference Paper | IST-REx-ID: 3968 | OA
Edelsbrunner H, Harer J. 2009. The persistent Morse complex segmentation of a 3-manifold. 3DPH: Modelling the Physiological Human, LNCS, vol. 5903, 36–50.
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