Please note that LibreCat no longer supports Internet Explorer versions 8 or 9 (or earlier).

We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.




128 Publications

2020 | Preprint | IST-REx-ID: 7673   OA
Kavcic, Bor, Gašper Tkačik, and Tobias Bollenbach. “A Minimal Biophysical Model of Combined Antibiotic Action.” BioRxiv. Cold Spring Harbor Laboratory, 2020.
View | Download (ext.)
 
2020 | Journal Article | IST-REx-ID: 7251
Lombardi, Fabrizio, Manuel Gómez-Extremera, Pedro Bernaola-Galván, Ramalingam Vetrivelan, Clifford B. Saper, Thomas E. Scammell, and Plamen Ch. Ivanov. “Critical Dynamics and Coupling in Bursts of Cortical Rhythms Indicate Non-Homeostatic Mechanism for Sleep-Stage Transitions and Dual Role of VLPO Neurons in Both Sleep and Wake.” The Journal of Neuroscience 40, no. 1 (2020): 171–90. https://doi.org/10.1523/jneurosci.1278-19.2019.
View | DOI | PubMed | Europe PMC
 
2020 | Research Data | IST-REx-ID: 7383
Grah, Rok. Matlab Scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression Regulation. IST Austria, 2020. https://doi.org/10.15479/AT:ISTA:7383.
View | Files available | DOI
 
2020 | Journal Article | IST-REx-ID: 7656   OA
Berry, Michael J., and Gašper Tkačik. “Clustering of Neural Activity: A Design Principle for Population Codes.” Frontiers in Computational Neuroscience 14 (2020): 20. https://doi.org/10.3389/fncom.2020.00020.
View | Files available | DOI | PubMed | Europe PMC
 
2020 | Preprint | IST-REx-ID: 7675   OA
Grah, Rok, Benjamin Zoller, and Gašper Tkačik. “Normative Models of Enhancer Function.” BioRxiv. Cold Spring Harbor Laboratory, 2020.
View | Download (ext.)
 
2019 | Journal Article | IST-REx-ID: 6046   OA
Mitosch, Karin, Georg Rieckh, and Mark Tobias Bollenbach. “Temporal Order and Precision of Complex Stress Responses in Individual Bacteria.” Molecular Systems Biology 15, no. 2 (2019). https://doi.org/10.15252/msb.20188470.
View | DOI | Download (ext.) | PubMed | Europe PMC
 
2019 | Journal Article | IST-REx-ID: 7103   OA
Wang, Jilin W. J. L., Fabrizio Lombardi, Xiyun Zhang, Christelle Anaclet, and Plamen Ch. Ivanov. “Non-Equilibrium Critical Dynamics of Bursts in θ and δ Rhythms as Fundamental Characteristic of Sleep and Wake Micro-Architecture.” PLOS Computational Biology 15, no. 11 (2019). https://doi.org/10.1371/journal.pcbi.1007268.
View | Files available | DOI | PubMed | Europe PMC
 
2019 | Preprint | IST-REx-ID: 7083   OA
Kavcic, Bor, Gašper Tkačik, and Tobias Bollenbach. “Mechanistic Origin of Drug Interactions between Translation-Inhibiting Antibiotics.” BioRxiv. Cold Spring Harbor Laboratory, n.d.
View | Download (ext.)
 
2019 | Preprint | IST-REx-ID: 7552   OA
Bialek, William, Thomas Gregor, and Gašper Tkačik. “Action at a Distance in Transcriptional Regulation.” ArXiv:1912.08579. ArXiv, n.d.
View | Download (ext.) | arXiv
 
2019 | Journal Article | IST-REx-ID: 5817
Kavcic, Bor, A. Sakashita, H. Noguchi, and P. Ziherl. “Limiting Shapes of Confined Lipid Vesicles.” Soft Matter 15, no. 4 (2019): 602–14. https://doi.org/10.1039/c8sm01956h.
View | DOI
 
2019 | Thesis | IST-REx-ID: 6473
Cepeda Humerez, Sarah A. Estimating Information Flow in Single Cells. IST Austria, 2019. https://doi.org/10.15479/AT:ISTA:6473.
View | Files available | DOI
 
2019 | Journal Article | IST-REx-ID: 6049   OA
De Martino, Daniele. “Feedback-Induced Self-Oscillations in Large Interacting Systems Subjected to Phase Transitions.” Journal of Physics A: Mathematical and Theoretical 52, no. 4 (2019). https://doi.org/10.1088/1751-8121/aaf2dd.
View | Files available | DOI
 
2019 | Journal Article | IST-REx-ID: 6784   OA
Ruess, Jakob, Maros Pleska, Calin C Guet, and Gašper Tkačik. “Molecular Noise of Innate Immunity Shapes Bacteria-Phage Ecologies.” PLoS Computational Biology 15, no. 7 (2019). https://doi.org/10.1371/journal.pcbi.1007168.
View | Files available | DOI
 
2019 | Journal Article | IST-REx-ID: 5945
Petkova, Mariela D., Gasper Tkacik, William Bialek, Eric F. Wieschaus, and Thomas Gregor. “Optimal Decoding of Cellular Identities in a Genetic Network.” Cell 176, no. 4 (2019): 844–855.e15. https://doi.org/10.1016/j.cell.2019.01.007.
View | Files available | DOI
 
2019 | Journal Article | IST-REx-ID: 7422   OA
Sokolowski, Thomas R, Joris Paijmans, Laurens Bossen, Thomas Miedema, Martijn Wehrens, Nils B. Becker, Kazunari Kaizu, Koichi Takahashi, Marileen Dogterom, and Pieter Rein ten Wolde. “EGFRD in All Dimensions.” The Journal of Chemical Physics 150, no. 5 (2019): 054108. https://doi.org/10.1063/1.5064867.
View | DOI | Download (ext.) | arXiv
 
2019 | Journal Article | IST-REx-ID: 6900   OA
Cepeda Humerez, Sarah A, Jakob Ruess, and Gašper Tkačik. “Estimating Information in Time-Varying Signals.” PLoS Computational Biology 15, no. 9 (2019): e1007290. https://doi.org/10.1371/journal.pcbi.1007290.
View | Files available | DOI | PubMed | Europe PMC
 
2019 | Journal Article | IST-REx-ID: 6090   OA
Carballo-Pacheco, Martín, Jonathan Desponds, Tatyana Gavrilchenko, Andreas Mayer, Roshan Prizak, Gautam Reddy, Ilya Nemenman, and Thierry Mora. “Receptor Crosstalk Improves Concentration Sensing of Multiple Ligands.” Physical Review E 99, no. 2 (2019). https://doi.org/10.1103/PhysRevE.99.022423.
View | DOI | Download (ext.)
 
2019 | Thesis | IST-REx-ID: 6071
Prizak, Roshan. Coevolution of Transcription Factors and Their Binding Sites in Sequence Space. IST Austria, 2019. https://doi.org/10.15479/at:ista:th6071.
View | Files available | DOI
 
2019 | Conference Paper | IST-REx-ID: 7606   OA
Hledik, Michal, Thomas R Sokolowski, and Gašper Tkačik. “A Tight Upper Bound on Mutual Information.” In IEEE Information Theory Workshop, ITW 2019, 8989292. IEEE, 2019. https://doi.org/10.1109/ITW44776.2019.8989292.
View | DOI | Download (ext.) | arXiv
 
2018 | Journal Article | IST-REx-ID: 543   OA
Chalk, Matthew J, Olivier Marre, and Gasper Tkacik. “Toward a Unified Theory of Efficient, Predictive, and Sparse Coding.” PNAS 115, no. 1 (2018): 186–91. https://doi.org/10.1073/pnas.1711114115.
View | DOI | Download (ext.)
 

Search

Filter Publications

Display / Sort

Citation Style: Chicago

Export / Embed