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167 Publications

2021 | Journal Article | IST-REx-ID: 10535 | OA
Bod’ová, K., Szep, E., & Barton, N. H. (2021). Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1009661
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2020 | Journal Article | IST-REx-ID: 8084 | OA
Lombardi, F., Gómez-Extremera, M., Bernaola-Galván, P., Vetrivelan, R., Saper, C. B., Scammell, T. E., & Ivanov, P. C. (2020). Critical dynamics and coupling in bursts of cortical rhythms indicate non-homeostatic mechanism for sleep-stage transitions and dual role of VLPO neurons in both sleep and wake. Journal of Neuroscience. Society for Neuroscience. https://doi.org/10.1523/jneurosci.1278-19.2019
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2020 | Research Data | IST-REx-ID: 8097 | OA
Kavcic, B. (2020). Analysis scripts and research data for the paper “Mechanisms of drug interactions between translation-inhibiting antibiotics.” IST Austria. https://doi.org/10.15479/AT:ISTA:8097
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2020 | Journal Article | IST-REx-ID: 8105 | OA
Lombardi, F., Wang, J. W. J. L., Zhang, X., & Ivanov, P. C. (2020). Power-law correlations and coupling of active and quiet states underlie a class of complex systems with self-organization at criticality. EPJ Web of Conferences. EDP Sciences. https://doi.org/10.1051/epjconf/202023000005
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2020 | Thesis | IST-REx-ID: 8155 | OA
Grah, R. (2020). Gene regulation across scales – how biophysical constraints shape evolution. IST Austria. https://doi.org/10.15479/AT:ISTA:8155
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2020 | Research Data | IST-REx-ID: 7383 | OA
Grah, R. (2020). Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation. IST Austria. https://doi.org/10.15479/AT:ISTA:7383
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2020 | Journal Article | IST-REx-ID: 7490 | OA
Narasimhan, M., Johnson, A. J., Prizak, R., Kaufmann, W., Tan, S., Casillas Perez, B. E., & Friml, J. (2020). Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants. ELife. eLife Sciences Publications. https://doi.org/10.7554/eLife.52067
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2020 | Journal Article | IST-REx-ID: 7569 | OA
Grah, R., & Friedlander, T. (2020). The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007642
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2020 | Journal Article | IST-REx-ID: 7656 | OA
Berry, M. J., & Tkačik, G. (2020). Clustering of neural activity: A design principle for population codes. Frontiers in Computational Neuroscience. Frontiers. https://doi.org/10.3389/fncom.2020.00020
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2020 | Preprint | IST-REx-ID: 7675 | OA
Grah, R., Zoller, B., & Tkačik, G. (2020). Normative models of enhancer function. bioRxiv. Cold Spring Harbor Laboratory. https://doi.org/10.1101/2020.04.08.029405
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2020 | Journal Article | IST-REx-ID: 8698 | OA
Maoz, O., Tkačik, G., Esteki, M. S., Kiani, R., & Schneidman, E. (2020). Learning probabilistic neural representations with randomly connected circuits. Proceedings of the National Academy of Sciences of the United States of America. National Academy of Sciences. https://doi.org/10.1073/pnas.1912804117
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2020 | Research Data | IST-REx-ID: 8930 | OA
Kavcic, B. (2020). Analysis scripts and research data for the paper “Minimal biophysical model of combined antibiotic action.” IST Austria. https://doi.org/10.15479/AT:ISTA:8930
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2020 | Journal Article | IST-REx-ID: 8955 | OA
Rizzo, R., Zhang, X., Wang, J. W. J. L., Lombardi, F., & Ivanov, P. C. (2020). Network physiology of cortico–muscular interactions. Frontiers in Physiology. Frontiers. https://doi.org/10.3389/fphys.2020.558070
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2020 | Journal Article | IST-REx-ID: 9000 | OA
Grah, R., Zoller, B., & Tkačik, G. (2020). Nonequilibrium models of optimal enhancer function. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.2006731117
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2020 | Research Data Reference | IST-REx-ID: 9776
Grah, R., & Friedlander, T. (2020). Supporting information. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007642.s001
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2020 | Research Data Reference | IST-REx-ID: 9777
Grah, R., & Friedlander, T. (2020). Maximizing crosstalk. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007642.s002
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2020 | Research Data Reference | IST-REx-ID: 9779
Grah, R., & Friedlander, T. (2020). Distribution of crosstalk values. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007642.s003
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2020 | Thesis | IST-REx-ID: 8657 | OA
Kavcic, B. (2020). Perturbations of protein synthesis: from antibiotics to genetics and physiology. IST Austria. https://doi.org/10.15479/AT:ISTA:8657
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2020 | Journal Article | IST-REx-ID: 8250 | OA
Kavcic, B., Tkačik, G., & Bollenbach, M. T. (2020). Mechanisms of drug interactions between translation-inhibiting antibiotics. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-020-17734-z
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2020 | Preprint | IST-REx-ID: 7673 | OA
Kavcic, B., Tkačik, G., & Bollenbach, M. T. (2020). A minimal biophysical model of combined antibiotic action. bioRxiv. Cold Spring Harbor Laboratory. https://doi.org/10.1101/2020.04.18.047886
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