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133 Publications

2020 | Research Data | IST-REx-ID: 7383 | OA
R. Grah, Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation. IST Austria, 2020.
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2020 | Preprint | IST-REx-ID: 7463 | OA
F. Lombardi, O. Shriki, H. J. Herrmann, and L. de Arcangelis, “Long-range temporal correlations in the broadband resting state activity of the human brain revealed by neuronal avalanches,” bioRxiv. Cold Spring Harbor Laboratory, 2020.
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2020 | Journal Article | IST-REx-ID: 7490 | OA
M. Narasimhan et al., “Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants,” eLife, vol. 9, 2020.
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2020 | Preprint | IST-REx-ID: 7553 | OA
W. F. Mlynarski, M. Hledik, T. R. Sokolowski, and G. Tkačik, “Statistical analysis and optimality of biological systems,” bioRxiv. Cold Spring Harbor Laboratory.
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2020 | Journal Article | IST-REx-ID: 7569 | OA
R. Grah and T. Friedlander, “The relation between crosstalk and gene regulation form revisited,” PLOS Computational Biology, vol. 16, no. 2, 2020.
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2020 | Journal Article | IST-REx-ID: 7652
I. Tomanek et al., “Gene amplification as a form of population-level gene expression regulation,” Nature Ecology & Evolution, vol. 4, no. 4, pp. 612–625, 2020.
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2020 | Journal Article | IST-REx-ID: 7656 | OA
M. J. Berry and G. Tkačik, “Clustering of neural activity: A design principle for population codes,” Frontiers in Computational Neuroscience, vol. 14, 2020.
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2020 | Preprint | IST-REx-ID: 7673 | OA
B. Kavcic, G. Tkačik, and T. Bollenbach, “A minimal biophysical model of combined antibiotic action,” bioRxiv. Cold Spring Harbor Laboratory, 2020.
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2020 | Preprint | IST-REx-ID: 7675 | OA
R. Grah, B. Zoller, and G. Tkačik, “Normative models of enhancer function,” bioRxiv. Cold Spring Harbor Laboratory, 2020.
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2020 | Journal Article | IST-REx-ID: 8084 | OA
F. Lombardi et al., “Critical dynamics and coupling in bursts of cortical rhythms indicate non-homeostatic mechanism for sleep-stage transitions and dual role of VLPO neurons in both sleep and wake,” Journal of Neuroscience, vol. 40, no. 1, pp. 171–190, 2020.
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2020 | Research Data | IST-REx-ID: 8097 | OA
B. Kavcic, Analysis scripts and research data for the paper “Mechanisms of drug interactions between translation-inhibiting antibiotics.” IST Austria, 2020.
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2020 | Journal Article | IST-REx-ID: 8105 | OA
F. Lombardi, J. W. J. L. Wang, X. Zhang, and P. C. Ivanov, “Power-law correlations and coupling of active and quiet states underlie a class of complex systems with self-organization at criticality,” EPJ Web of Conferences, vol. 230, 2020.
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2020 | Thesis | IST-REx-ID: 8155 | OA
R. Grah, Gene regulation across scales – how biophysical constraints shape evolution. IST Austria, 2020.
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2020 | Journal Article | IST-REx-ID: 8250 | OA
B. Kavcic, G. Tkačik, and M. T. Bollenbach, “Mechanisms of drug interactions between translation-inhibiting antibiotics,” Nature Communications, vol. 11, 2020.
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2019 | Journal Article | IST-REx-ID: 7422 | OA
T. R. Sokolowski et al., “eGFRD in all dimensions,” The Journal of Chemical Physics, vol. 150, no. 5, p. 054108, 2019.
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2019 | Preprint | IST-REx-ID: 7552 | OA
W. Bialek, T. Gregor, and G. Tkačik, “Action at a distance in transcriptional regulation,” arXiv:1912.08579. ArXiv.
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2019 | Conference Paper | IST-REx-ID: 7606 | OA
M. Hledik, T. R. Sokolowski, and G. Tkačik, “A tight upper bound on mutual information,” in IEEE Information Theory Workshop, ITW 2019, Visby, Sweden, 2019, p. 8989292.
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2019 | Journal Article | IST-REx-ID: 5817
B. Kavcic, A. Sakashita, H. Noguchi, and P. Ziherl, “Limiting shapes of confined lipid vesicles,” Soft Matter, vol. 15, no. 4, pp. 602–614, 2019.
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2019 | Journal Article | IST-REx-ID: 5945
M. D. Petkova, G. Tkačik, W. Bialek, E. F. Wieschaus, and T. Gregor, “Optimal decoding of cellular identities in a genetic network,” Cell, vol. 176, no. 4, p. 844–855.e15, 2019.
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2019 | Journal Article | IST-REx-ID: 6046 | OA
K. Mitosch, G. Rieckh, and M. T. Bollenbach, “Temporal order and precision of complex stress responses in individual bacteria,” Molecular systems biology, vol. 15, no. 2, 2019.
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