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128 Publications
2021 | Journal Article | IST-REx-ID: 9316 | 
Rigidity percolation uncovers a structural basis for embryonic tissue phase transitions
N. Petridou, B. Corominas-Murtra, C.-P.J. Heisenberg, E.B. Hannezo, Cell 184 (2021) 1914–1928.e19.
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N. Petridou, B. Corominas-Murtra, C.-P.J. Heisenberg, E.B. Hannezo, Cell 184 (2021) 1914–1928.e19.
2021 | Journal Article | IST-REx-ID: 9336 |
Building and sustaining mentor interactions as a mentee
S. Sarabipour, S.J. Hainer, F.N. Arslan, C.M. De Winde, E. Furlong, N. Bielczyk, N.M. Jadavji, A.P. Shah, S. Davla, FEBS Journal (2021).
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S. Sarabipour, S.J. Hainer, F.N. Arslan, C.M. De Winde, E. Furlong, N. Bielczyk, N.M. Jadavji, A.P. Shah, S. Davla, FEBS Journal (2021).
2021 | Journal Article | IST-REx-ID: 9759 |
Ten simple rules to improve academic work- life balance
M.J. Bartlett, F.N. Arslan, A. Bankston, S. Sarabipour, PLoS Computational Biology 17 (2021).
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M.J. Bartlett, F.N. Arslan, A. Bankston, S. Sarabipour, PLoS Computational Biology 17 (2021).
2021 | Journal Article | IST-REx-ID: 9999 |
Apical contacts stemming from incomplete delamination guide progenitor cell allocation through a dragging mechanism
E. Pulgar, C. Schwayer, N. Guerrero, L. López, S. Márquez, S. Härtel, R. Soto, C.P. Heisenberg, M.L. Concha, ELife 10 (2021).
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E. Pulgar, C. Schwayer, N. Guerrero, L. López, S. Márquez, S. Härtel, R. Soto, C.P. Heisenberg, M.L. Concha, ELife 10 (2021).
2021 | Journal Article | IST-REx-ID: 10202 |
Satb2 acts as a gatekeeper for major developmental transitions during early vertebrate embryogenesis
S.J. Pradhan, P.C. Reddy, M. Smutny, A. Sharma, K. Sako, M.S. Oak, R. Shah, M. Pal, O. Deshpande, G. Dsilva, Y. Tang, R. Mishra, G. Deshpande, A.J. Giraldez, M. Sonawane, C.-P.J. Heisenberg, S. Galande, Nature Communications 12 (2021).
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S.J. Pradhan, P.C. Reddy, M. Smutny, A. Sharma, K. Sako, M.S. Oak, R. Shah, M. Pal, O. Deshpande, G. Dsilva, Y. Tang, R. Mishra, G. Deshpande, A.J. Giraldez, M. Sonawane, C.-P.J. Heisenberg, S. Galande, Nature Communications 12 (2021).
2021 | Journal Article | IST-REx-ID: 10366 |
Special rebranding issue: “Quantitative cell and developmental biology”
C.-P.J. Heisenberg, A.M. Lennon, R. Mayor, G. Salbreux, Cells and Development 168 (2021).
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C.-P.J. Heisenberg, A.M. Lennon, R. Mayor, G. Salbreux, Cells and Development 168 (2021).
2021 | Journal Article | IST-REx-ID: 10406
Dissecting organismal morphogenesis by bridging genetics and biophysics
N. Mishra, C.-P.J. Heisenberg, Annual Review of Genetics 55 (2021) 209–233.
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N. Mishra, C.-P.J. Heisenberg, Annual Review of Genetics 55 (2021) 209–233.
2021 | Journal Article | IST-REx-ID: 10606 |
Combined effect of cell geometry and polarity domains determines the orientation of unequal division
B.G. Godard, R. Dumollard, C.-P.J. Heisenberg, A. Mcdougall, ELife 10 (2021).
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B.G. Godard, R. Dumollard, C.-P.J. Heisenberg, A. Mcdougall, ELife 10 (2021).
2021 | Journal Article | IST-REx-ID: 9298 |
Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)
Klionsky DJ et al. 2021. Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy. 17(1), 1–382.
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Klionsky DJ et al. 2021. Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition). Autophagy. 17(1), 1–382.
2021 | Journal Article | IST-REx-ID: 9379 |
The Wdr1-LIMK-Cofilin axis controls B cell antigen receptor-induced actin remodeling and signaling at the immune synapse
M. Bolger-Munro, K. Choi, F. Cheung, Y.T. Liu, M. Dang-Lawson, N. Deretic, C. Keane, M.R. Gold, Frontiers in Cell and Developmental Biology 9 (2021).
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M. Bolger-Munro, K. Choi, F. Cheung, Y.T. Liu, M. Dang-Lawson, N. Deretic, C. Keane, M.R. Gold, Frontiers in Cell and Developmental Biology 9 (2021).
2021 | Journal Article | IST-REx-ID: 15264 |
The actin-disassembly protein glia maturation factor γ enhances actin remodeling and B cell antigen receptor signaling at the immune synapse
N. Deretic, M. Bolger-Munro, K. Choi, L. Abraham, M.R. Gold, Frontiers in Cell and Developmental Biology 9 (2021).
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N. Deretic, M. Bolger-Munro, K. Choi, L. Abraham, M.R. Gold, Frontiers in Cell and Developmental Biology 9 (2021).
2021 | Journal Article | IST-REx-ID: 9350 |
Holding it together: when cadherin meets cadherin
F.N. Arslan, J. Eckert, T. Schmidt, C.-P.J. Heisenberg, Biophysical Journal 120 (2021) 4182–4192.
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F.N. Arslan, J. Eckert, T. Schmidt, C.-P.J. Heisenberg, Biophysical Journal 120 (2021) 4182–4192.
2021 | Thesis | IST-REx-ID: 9623 |
Fertilization-induced deformations are controlled by the actin cortex and a mitochondria-rich subcortical layer in ascidian oocytes
S. Caballero Mancebo, Fertilization-Induced Deformations Are Controlled by the Actin Cortex and a Mitochondria-Rich Subcortical Layer in Ascidian Oocytes, Institute of Science and Technology Austria, 2021.
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S. Caballero Mancebo, Fertilization-Induced Deformations Are Controlled by the Actin Cortex and a Mitochondria-Rich Subcortical Layer in Ascidian Oocytes, Institute of Science and Technology Austria, 2021.
2021 | Journal Article | IST-REx-ID: 9006 |
Cytoplasm's got moves
S. Shamipour, S. Caballero Mancebo, C.-P.J. Heisenberg, Developmental Cell 56 (2021) P213-226.
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S. Shamipour, S. Caballero Mancebo, C.-P.J. Heisenberg, Developmental Cell 56 (2021) P213-226.
2021 | Thesis | IST-REx-ID: 9397 |
Coordinated spatiotemporal reorganization of interstitial fluid is required for axial mesendoderm migration in zebrafish gastrulation
K. Huljev, Coordinated Spatiotemporal Reorganization of Interstitial Fluid Is Required for Axial Mesendoderm Migration in Zebrafish Gastrulation, Institute of Science and Technology Austria, 2021.
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K. Huljev, Coordinated Spatiotemporal Reorganization of Interstitial Fluid Is Required for Axial Mesendoderm Migration in Zebrafish Gastrulation, Institute of Science and Technology Austria, 2021.
2020 | Journal Article | IST-REx-ID: 7888 |
Zebrafish embryonic explants undergo genetically encoded self-assembly
A. Schauer, D.C. Nunes Pinheiro, R. Hauschild, C.-P.J. Heisenberg, ELife 9 (2020).
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A. Schauer, D.C. Nunes Pinheiro, R. Hauschild, C.-P.J. Heisenberg, ELife 9 (2020).
2020 | Journal Article | IST-REx-ID: 8680 |
An adhesion code ensures robust pattern formation during tissue morphogenesis
T.Y.-C. Tsai, M.K. Sikora, P. Xia, T. Colak-Champollion, H. Knaut, C.-P.J. Heisenberg, S.G. Megason, Science 370 (2020) 113–116.
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T.Y.-C. Tsai, M.K. Sikora, P. Xia, T. Colak-Champollion, H. Knaut, C.-P.J. Heisenberg, S.G. Megason, Science 370 (2020) 113–116.
2020 | Journal Article | IST-REx-ID: 8957
Apical relaxation during mitotic rounding promotes tension-oriented cell division
B.G. Godard, R. Dumollard, E. Munro, J. Chenevert, C. Hebras, A. Mcdougall, C.-P.J. Heisenberg, Developmental Cell 55 (2020) 695–706.
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B.G. Godard, R. Dumollard, E. Munro, J. Chenevert, C. Hebras, A. Mcdougall, C.-P.J. Heisenberg, Developmental Cell 55 (2020) 695–706.
2020 | Book Chapter | IST-REx-ID: 7227
Zebrafish gastrulation: Putting fate in motion
D.C. Nunes Pinheiro, C.-P.J. Heisenberg, in:, Gastrulation: From Embryonic Pattern to Form, Elsevier, 2020, pp. 343–375.
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D.C. Nunes Pinheiro, C.-P.J. Heisenberg, in:, Gastrulation: From Embryonic Pattern to Form, Elsevier, 2020, pp. 343–375.
2020 | Book Chapter | IST-REx-ID: 7410
Mechanisms of zebrafish epiboly: A current view
A.E.E. Bruce, C.-P.J. Heisenberg, in:, L. Solnica-Krezel (Ed.), Gastrulation: From Embryonic Pattern to Form, Elsevier, 2020, pp. 319–341.
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A.E.E. Bruce, C.-P.J. Heisenberg, in:, L. Solnica-Krezel (Ed.), Gastrulation: From Embryonic Pattern to Form, Elsevier, 2020, pp. 319–341.
2020 | Preprint | IST-REx-ID: 9750 |
Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion
J. Slovakova, M.K. Sikora, S. Caballero Mancebo, G. Krens, W. Kaufmann, K. Huljev, C.-P.J. Heisenberg, BioRxiv (2020).
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J. Slovakova, M.K. Sikora, S. Caballero Mancebo, G. Krens, W. Kaufmann, K. Huljev, C.-P.J. Heisenberg, BioRxiv (2020).
2020 | Thesis | IST-REx-ID: 8350 |
Bulk actin dynamics drive phase segregation in zebrafish oocytes
S. Shamipour, Bulk Actin Dynamics Drive Phase Segregation in Zebrafish Oocytes , Institute of Science and Technology Austria, 2020.
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S. Shamipour, Bulk Actin Dynamics Drive Phase Segregation in Zebrafish Oocytes , Institute of Science and Technology Austria, 2020.
2019 | Book Chapter | IST-REx-ID: 5793
Studying YAP-mediated 3D morphogenesis using fish embryos and human spheroids
Y. Asaoka, H. Morita, H. Furumoto, C.-P.J. Heisenberg, M. Furutani-Seiki, in:, A. Hergovich (Ed.), The Hippo Pathway, Springer, 2019, pp. 167–181.
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Y. Asaoka, H. Morita, H. Furumoto, C.-P.J. Heisenberg, M. Furutani-Seiki, in:, A. Hergovich (Ed.), The Hippo Pathway, Springer, 2019, pp. 167–181.
2019 | Journal Article | IST-REx-ID: 6025 |
Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm cell migration
D. Capek, M. Smutny, A.M. Tichy, M. Morri, H.L. Janovjak, C.-P.J. Heisenberg, ELife 8 (2019).
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D. Capek, M. Smutny, A.M. Tichy, M. Morri, H.L. Janovjak, C.-P.J. Heisenberg, ELife 8 (2019).
2019 | Journal Article | IST-REx-ID: 6087 |
Lateral inhibition in cell specification mediated by mechanical signals modulating TAZ activity
P. Xia, D.J. Gütl, V. Zheden, C.-P.J. Heisenberg, Cell 176 (2019) 1379–1392.e14.
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P. Xia, D.J. Gütl, V. Zheden, C.-P.J. Heisenberg, Cell 176 (2019) 1379–1392.e14.
2019 | Journal Article | IST-REx-ID: 6601 |
Mechanochemical feedback loops in development and disease
E.B. Hannezo, C.-P.J. Heisenberg, Cell 178 (2019) 12–25.
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E.B. Hannezo, C.-P.J. Heisenberg, Cell 178 (2019) 12–25.
2019 | Journal Article | IST-REx-ID: 6631
Cell division and tissue mechanics
B.G. Godard, C.-P.J. Heisenberg, Current Opinion in Cell Biology 60 (2019) 114–120.
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B.G. Godard, C.-P.J. Heisenberg, Current Opinion in Cell Biology 60 (2019) 114–120.
2019 | Journal Article | IST-REx-ID: 6837
Migrasomes take center stage
S. Tavano, C.-P.J. Heisenberg, Nature Cell Biology 21 (2019) 918–920.
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S. Tavano, C.-P.J. Heisenberg, Nature Cell Biology 21 (2019) 918–920.
2019 | Journal Article | IST-REx-ID: 6899 |
Biomechanical signaling within the developing zebrafish heart attunes endocardial growth to myocardial chamber dimensions
D. Bornhorst, P. Xia, H. Nakajima, C. Dingare, W. Herzog, V. Lecaudey, N. Mochizuki, C.-P.J. Heisenberg, D. Yelon, S. Abdelilah-Seyfried, Nature Communications 10 (2019) 4113.
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D. Bornhorst, P. Xia, H. Nakajima, C. Dingare, W. Herzog, V. Lecaudey, N. Mochizuki, C.-P.J. Heisenberg, D. Yelon, S. Abdelilah-Seyfried, Nature Communications 10 (2019) 4113.
2019 | Journal Article | IST-REx-ID: 6980 |
Tissue rheology in embryonic organization
N. Petridou, C.-P.J. Heisenberg, The EMBO Journal 38 (2019).
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N. Petridou, C.-P.J. Heisenberg, The EMBO Journal 38 (2019).
2019 | Book Chapter | IST-REx-ID: 6987 |
Emergence of embryo shape during cleavage divisions
A. McDougall, J. Chenevert, B.G. Godard, R. Dumollard, in:, W. Tworzydlo, S.M. Bilinski (Eds.), Evo-Devo: Non-Model Species in Cell and Developmental Biology, Springer Nature, 2019, pp. 127–154.
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A. McDougall, J. Chenevert, B.G. Godard, R. Dumollard, in:, W. Tworzydlo, S.M. Bilinski (Eds.), Evo-Devo: Non-Model Species in Cell and Developmental Biology, Springer Nature, 2019, pp. 127–154.
2019 | Thesis | IST-REx-ID: 7186 |
Mechanosensation of tight junctions depends on ZO-1 phase separation and flow
C. Schwayer, Mechanosensation of Tight Junctions Depends on ZO-1 Phase Separation and Flow, Institute of Science and Technology Austria, 2019.
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C. Schwayer, Mechanosensation of Tight Junctions Depends on ZO-1 Phase Separation and Flow, Institute of Science and Technology Austria, 2019.
2019 | Journal Article | IST-REx-ID: 5789 |
Fluidization-mediated tissue spreading by mitotic cell rounding and non-canonical Wnt signalling
N. Petridou, S. Grigolon, G. Salbreux, E.B. Hannezo, C.-P.J. Heisenberg, Nature Cell Biology 21 (2019) 169–178.
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N. Petridou, S. Grigolon, G. Salbreux, E.B. Hannezo, C.-P.J. Heisenberg, Nature Cell Biology 21 (2019) 169–178.
2019 | Journal Article | IST-REx-ID: 6508 |
Bulk actin dynamics drive phase segregation in zebrafish oocytes
S. Shamipour, R. Kardos, S. Xue, B. Hof, E.B. Hannezo, C.-P.J. Heisenberg, Cell 177 (2019) 1463–1479.e18.
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S. Shamipour, R. Kardos, S. Xue, B. Hof, E.B. Hannezo, C.-P.J. Heisenberg, Cell 177 (2019) 1463–1479.e18.
2019 | Journal Article | IST-REx-ID: 7001 |
Mechanosensation of tight junctions depends on ZO-1 phase separation and flow
C. Schwayer, S. Shamipour, K. Pranjic-Ferscha, A. Schauer, M. Balda, M. Tada, K. Matter, C.-P.J. Heisenberg, Cell 179 (2019) 937–952.e18.
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C. Schwayer, S. Shamipour, K. Pranjic-Ferscha, A. Schauer, M. Balda, M. Tada, K. Matter, C.-P.J. Heisenberg, Cell 179 (2019) 937–952.e18.
2018 | Journal Article | IST-REx-ID: 308 |
Drosophila TNF modulates tissue tension in the embryo to facilitate macrophage invasive migration
A. Ratheesh, J. Bicher, M. Smutny, J. Veselá, E. Papusheva, G. Krens, W. Kaufmann, A. György, A.M. Casano, D.E. Siekhaus, Developmental Cell 45 (2018) 331–346.
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A. Ratheesh, J. Bicher, M. Smutny, J. Veselá, E. Papusheva, G. Krens, W. Kaufmann, A. György, A.M. Casano, D.E. Siekhaus, Developmental Cell 45 (2018) 331–346.
2018 | Journal Article | IST-REx-ID: 54
Mechanical force-driven adherents junction remodeling and epithelial dynamics
D.C. Nunes Pinheiro, Y. Bellaïche, Developmental Cell 47 (2018) 3–19.
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D.C. Nunes Pinheiro, Y. Bellaïche, Developmental Cell 47 (2018) 3–19.
2018 | Journal Article | IST-REx-ID: 5676 |
Occluding junctions as novel regulators of tissue mechanics during wound repair
L. Carvalho, P. Patricio, S. Ponte, C.-P.J. Heisenberg, L. Almeida, A.S. Nunes, N.A.M. Araújo, A. Jacinto, Journal of Cell Biology 217 (2018) 4267–4283.
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L. Carvalho, P. Patricio, S. Ponte, C.-P.J. Heisenberg, L. Almeida, A.S. Nunes, N.A.M. Araújo, A. Jacinto, Journal of Cell Biology 217 (2018) 4267–4283.
2018 | Journal Article | IST-REx-ID: 10880 |
Significance of whole-genome duplications on the emergence of evolutionary novelties
M. Yuuta, K. Koshiba-Takeuchi, Briefings in Functional Genomics 17 (2018) 329–338.
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M. Yuuta, K. Koshiba-Takeuchi, Briefings in Functional Genomics 17 (2018) 329–338.
2018 | Thesis | IST-REx-ID: 50 |
Optogenetic Frizzled 7 reveals a permissive function of Wnt/PCP signaling in directed mesenchymal cell migration
D. Capek, Optogenetic Frizzled 7 Reveals a Permissive Function of Wnt/PCP Signaling in Directed Mesenchymal Cell Migration, Institute of Science and Technology Austria, 2018.
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D. Capek, Optogenetic Frizzled 7 Reveals a Permissive Function of Wnt/PCP Signaling in Directed Mesenchymal Cell Migration, Institute of Science and Technology Austria, 2018.
2017 | Journal Article | IST-REx-ID: 678
Multiscale force sensing in development
N. Petridou, Z.P. Spiro, C.-P.J. Heisenberg, Nature Cell Biology 19 (2017) 581–588.
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N. Petridou, Z.P. Spiro, C.-P.J. Heisenberg, Nature Cell Biology 19 (2017) 581–588.
2017 | Journal Article | IST-REx-ID: 686
D'Arcy Thompson's ‘on growth and form’: From soap bubbles to tissue self organization
C.-P.J. Heisenberg, Mechanisms of Development 145 (2017) 32–37.
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C.-P.J. Heisenberg, Mechanisms of Development 145 (2017) 32–37.
2017 | Journal Article | IST-REx-ID: 1067 |
The physical basis of coordinated tissue spreading in zebrafish gastrulation
H. Morita, S. Grigolon, M. Bock, G. Krens, G. Salbreux, C.-P.J. Heisenberg, Developmental Cell 40 (2017) 354–366.
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H. Morita, S. Grigolon, M. Bock, G. Krens, G. Salbreux, C.-P.J. Heisenberg, Developmental Cell 40 (2017) 354–366.
2017 | Journal Article | IST-REx-ID: 1025
Cell biology: Stretched divisions
C.-P.J. Heisenberg, Nature 543 (2017) 43–44.
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C.-P.J. Heisenberg, Nature 543 (2017) 43–44.
2017 | Journal Article | IST-REx-ID: 803 |
DNA cross-bridging shapes a single nucleus from a set of mitotic chromosomes
M. Samwer, M. Schneider, R. Hoefler, P.S. Schmalhorst, J. Jude, J. Zuber, D. Gerlic, Cell 170 (2017) 956–972.
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M. Samwer, M. Schneider, R. Hoefler, P.S. Schmalhorst, J. Jude, J. Zuber, D. Gerlic, Cell 170 (2017) 956–972.
2017 | Journal Article | IST-REx-ID: 804 |
Overcoming the limitations of the MARTINI force field in simulations of polysaccharides
P.S. Schmalhorst, F. Deluweit, R. Scherrers, C.-P.J. Heisenberg, M.K. Sikora, Journal of Chemical Theory and Computation 13 (2017) 5039–5053.
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P.S. Schmalhorst, F. Deluweit, R. Scherrers, C.-P.J. Heisenberg, M.K. Sikora, Journal of Chemical Theory and Computation 13 (2017) 5039–5053.
2017 | Thesis | IST-REx-ID: 961 |
Cell adhesion and cell fate: An effective feedback loop during zebrafish gastrulation
V. Barone, Cell Adhesion and Cell Fate: An Effective Feedback Loop during Zebrafish Gastrulation, Institute of Science and Technology Austria, 2017.
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V. Barone, Cell Adhesion and Cell Fate: An Effective Feedback Loop during Zebrafish Gastrulation, Institute of Science and Technology Austria, 2017.
2017 | Journal Article | IST-REx-ID: 728
Coordination of morphogenesis and cell fate specification in development
C. Chan, C.-P.J. Heisenberg, T. Hiiragi, Current Biology 27 (2017) R1024–R1035.
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C. Chan, C.-P.J. Heisenberg, T. Hiiragi, Current Biology 27 (2017) R1024–R1035.
2017 | Journal Article | IST-REx-ID: 729
Regeneration tensed up polyploidy takes the lead
Z.P. Spiro, C.-P.J. Heisenberg, Developmental Cell 42 (2017) 559–560.
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Z.P. Spiro, C.-P.J. Heisenberg, Developmental Cell 42 (2017) 559–560.
2017 | Journal Article | IST-REx-ID: 946 |
Live tracking of moving samples in confocal microscopy for vertically grown roots
D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
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D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).