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97 Publications

2021 | Journal Article | IST-REx-ID: 9046 | OA
Römhild R, Andersson DI. 2021. Mechanisms and therapeutic potential of collateral sensitivity to antibiotics. PLoS Pathogens. 17(1), e1009172.
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2021 | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron AA, Tomasek K, Caruso Carter C, Sonnleitner E, Kavcic B, Paixão T, Guet CC. 2021. Local genetic context shapes the function of a gene regulatory network. eLife. 10, e65993.
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2021 | Journal Article | IST-REx-ID: 9647 | OA
Petrov T, Igler C, Sezgin A, Henzinger TA, Guet CC. Long lived transients in gene regulation. Theoretical Computer Science.
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2020 | Thesis | IST-REx-ID: 8155 | OA
Grah R. 2020. Gene regulation across scales – how biophysical constraints shape evolution. IST Austria.
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2020 | Book Chapter | IST-REx-ID: 8173
Kainrath S, Janovjak HL. 2020.Design and application of light-regulated receptor tyrosine kinases. In: Photoswitching Proteins. Methods in Molecular Biology, vol. 2173, 233–246.
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2020 | Research Data | IST-REx-ID: 7383 | OA
Grah R. 2020. Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation, IST Austria, 10.15479/AT:ISTA:7383.
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2020 | Preprint | IST-REx-ID: 7675 | OA
Grah R, Zoller B, Tkačik G. 2020. Normative models of enhancer function. bioRxiv, 10.1101/2020.04.08.029405.
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2020 | Thesis | IST-REx-ID: 7680
Kainrath S. 2020. Synthetic tools for optogenetic and chemogenetic inhibition of cellular signals. IST Austria.
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2020 | Research Data | IST-REx-ID: 8951 | OA
Nagy-Staron AA. 2020. Sequences of gene regulatory network permutations for the article ‘Local genetic context shapes the function of a gene regulatory network’, IST Austria, 10.15479/AT:ISTA:8951.
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2020 | Journal Article | IST-REx-ID: 7652 | OA
Tomanek I, Grah R, Lagator M, Andersson AMC, Bollback JP, Tkačik G, Guet CC. 2020. Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. 4(4), 612–625.
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2020 | Thesis | IST-REx-ID: 8653
Tomanek I. 2020. The evolution of gene expression by copy number and point mutations. IST Austria.
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2020 | Journal Article | IST-REx-ID: 7569 | OA
Grah R, Friedlander T. 2020. The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. 16(2), e1007642.
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2019 | Journal Article | IST-REx-ID: 196 | OA
Lang M, Shkolnikov M. 2019. Harmonic dynamics of the Abelian sandpile. Proceedings of the National Academy of Sciences. 116(8), 2821–2830.
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2019 | Conference Paper | IST-REx-ID: 7147
Guet CC, Henzinger TA, Igler C, Petrov T, Sezgin A. 2019. Transient memory in gene regulation. 17th International Conference on Computational Methods in Systems Biology. CMSB: Computational Methods in Systems Biology, LNCS, vol. 11773, 155–187.
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2019 | Journal Article | IST-REx-ID: 6465 | OA
Chassin H, Müller M, Tigges M, Scheller L, Lang M, Fussenegger M. 2019. A modular degron library for synthetic circuits in mammalian cells. Nature Communications. 10(1), 2013.
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2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess J, Pleska M, Guet CC, Tkačik G. 2019. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 15(7), e1007168.
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2019 | Research Data | IST-REx-ID: 7016 | OA
Tomanek I. 2019. Data for the paper ‘Gene amplification as a form of population-level gene expression regulation’, IST Austria, 10.15479/AT:ISTA:7016.
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2019 | Journal Article | IST-REx-ID: 138 | OA
Nikolic N. 2019. Autoregulation of bacterial gene expression: lessons from the MazEF toxin–antitoxin system. Current Genetics. 65(1), 133–138.
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2019 | Journal Article | IST-REx-ID: 6717 | OA
Igler C, Abedon ST. 2019. Commentary: A host-produced quorum-sensing autoinducer controls a phage lysis-lysogeny decision. Frontiers in Microbiology. 10, 1171.
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2019 | Thesis | IST-REx-ID: 6371 | OA
Igler C. 2019. On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation. IST Austria.
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