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92 Publications

2021 | Journal Article | IST-REx-ID: 9046 | OA
Römhild R, Andersson DI. 2021. Mechanisms and therapeutic potential of collateral sensitivity to antibiotics. PLoS Pathogens. 17(1), e1009172.
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2021 | Journal Article | IST-REx-ID: 9283 | OA
Nagy-Staron AA, Tomasek K, Caruso Carter C, Sonnleitner E, Kavcic B, Paixão T, Guet CC. 2021. Local genetic context shapes the function of a gene regulatory network. eLife. 10, e65993.
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2020 | Thesis | IST-REx-ID: 8155 | OA
Grah R. 2020. Gene regulation across scales – how biophysical constraints shape evolution. IST Austria.
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2020 | Book Chapter | IST-REx-ID: 8173
Kainrath S, Janovjak HL. 2020.Design and application of light-regulated receptor tyrosine kinases. In: Photoswitching Proteins. Methods in Molecular Biology, vol. 2173, 233–246.
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2020 | Thesis | IST-REx-ID: 8653
Tomanek I. 2020. The evolution of gene expression by copy number and point mutations. IST Austria.
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2020 | Research Data | IST-REx-ID: 7383 | OA
Grah R. 2020. Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation, IST Austria, 10.15479/AT:ISTA:7383.
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2020 | Journal Article | IST-REx-ID: 7569 | OA
Grah R, Friedlander T. 2020. The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. 16(2), e1007642.
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2020 | Journal Article | IST-REx-ID: 7652 | OA
Tomanek I, Grah R, Lagator M, Andersson AMC, Bollback JP, Tkačik G, Guet CC. 2020. Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. 4(4), 612–625.
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2020 | Preprint | IST-REx-ID: 7675 | OA
Grah R, Zoller B, Tkačik G. 2020. Normative models of enhancer function. bioRxiv, 10.1101/2020.04.08.029405.
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2020 | Thesis | IST-REx-ID: 7680
Kainrath S. 2020. Synthetic tools for optogenetic and chemogenetic inhibition of cellular signals. IST Austria.
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2020 | Research Data | IST-REx-ID: 8951 | OA
Nagy-Staron AA. 2020. Sequences of gene regulatory network permutations for the article ‘Local genetic context shapes the function of a gene regulatory network’, IST Austria, 10.15479/AT:ISTA:8951.
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2019 | Journal Article | IST-REx-ID: 196 | OA
Lang M, Shkolnikov M. 2019. Harmonic dynamics of the Abelian sandpile. Proceedings of the National Academy of Sciences. 116(8), 2821–2830.
View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC | arXiv
 
2019 | Conference Paper | IST-REx-ID: 7147
Guet CC, Henzinger TA, Igler C, Petrov T, Sezgin A. 2019. Transient memory in gene regulation. 17th International Conference on Computational Methods in Systems Biology. CMSB: Computational Methods in Systems Biology, LNCS, vol. 11773, 155–187.
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2019 | Journal Article | IST-REx-ID: 6465 | OA
Chassin H, Müller M, Tigges M, Scheller L, Lang M, Fussenegger M. 2019. A modular degron library for synthetic circuits in mammalian cells. Nature Communications. 10(1), 2013.
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2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess J, Pleska M, Guet CC, Tkačik G. 2019. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 15(7), e1007168.
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2019 | Research Data | IST-REx-ID: 7016 | OA
Tomanek I. 2019. Data for the paper ‘Gene amplification as a form of population-level gene expression regulation’, IST Austria, 10.15479/AT:ISTA:7016.
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2019 | Journal Article | IST-REx-ID: 138 | OA
Nikolic N. 2019. Autoregulation of bacterial gene expression: lessons from the MazEF toxin–antitoxin system. Current Genetics. 65(1), 133–138.
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2019 | Journal Article | IST-REx-ID: 6717 | OA
Igler C, Abedon ST. 2019. Commentary: A host-produced quorum-sensing autoinducer controls a phage lysis-lysogeny decision. Frontiers in Microbiology. 10, 1171.
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2019 | Thesis | IST-REx-ID: 6371 | OA
Igler C. 2019. On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation. IST Austria.
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2018 | Journal Article | IST-REx-ID: 82 | OA
Chaudhry W, Pleska M, Shah N, Weiss H, Mccall I, Meyer J, Gupta A, Guet CC, Levin B. 2018. Leaky resistance and the conditions for the existence of lytic bacteriophage. PLoS Biology. 16(8), 2005971.
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