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86 Publications
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2020 | Journal Article | IST-REx-ID: 7652
Tomanek I, Grah R, Lagator M, et al. Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. 2020;4(4):612-625. doi:10.1038/s41559-020-1132-7
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2020 | Journal Article | IST-REx-ID: 7569 
Grah R, Friedlander T. The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. 2020;16(2):e1007642. doi:10.1371/journal.pcbi.1007642
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2020 | Thesis | IST-REx-ID: 7680
Kainrath S. Synthetic Tools for Optogenetic and Chemogenetic Inhibition of Cellular Signals. IST Austria; 2020. doi:10.15479/AT:ISTA:7680
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2020 | Research Data | IST-REx-ID: 7383
Grah R. Matlab Scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression Regulation. IST Austria; 2020. doi:10.15479/AT:ISTA:7383
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2020 | Preprint | IST-REx-ID: 7675
Grah R, Zoller B, Tkačik G. Normative models of enhancer function. bioRxiv. 2020.
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2019 | Journal Article | IST-REx-ID: 6717
Igler C, Abedon ST. Commentary: A host-produced quorum-sensing autoinducer controls a phage lysis-lysogeny decision. Frontiers in Microbiology. 2019;10. doi:10.3389/fmicb.2019.01171
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2019 | Journal Article | IST-REx-ID: 6465
Chassin H, Müller M, Tigges M, Scheller L, Lang M, Fussenegger M. A modular degron library for synthetic circuits in mammalian cells. Nature Communications. 2019;10(1). doi:10.1038/s41467-019-09974-5
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2019 | Thesis | IST-REx-ID: 6371
Igler C. On the Nature of Gene Regulatory Design - The Biophysics of Transcription Factor Binding Shapes Gene Regulation. IST Austria; 2019. doi:10.15479/AT:ISTA:6371
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2019 | Journal Article | IST-REx-ID: 138
Nikolic N. Autoregulation of bacterial gene expression: lessons from the MazEF toxin–antitoxin system. Current Genetics. 2019;65(1):133-138. doi:10.1007/s00294-018-0879-8
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2019 | Conference Paper | IST-REx-ID: 7147
Guet CC, Henzinger TA, Igler C, Petrov T, Sezgin A. Transient memory in gene regulation. In: 17th International Conference on Computational Methods in Systems Biology. Vol 11773. Springer Nature; 2019:155-187. doi:10.1007/978-3-030-31304-3_9
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2019 | Journal Article | IST-REx-ID: 6784
Ruess J, Pleska M, Guet CC, Tkačik G. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 2019;15(7). doi:10.1371/journal.pcbi.1007168
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2019 | Research Data | IST-REx-ID: 7016
Tomanek I. Data for the Paper “Gene Amplification as a Form of Population-Level Gene Expression Regulation.” IST Austria; 2019. doi:10.15479/AT:ISTA:7016
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2018 | Journal Article | IST-REx-ID: 67
Igler C, Lagator M, Tkacik G, Bollback JP, Guet CC. Evolutionary potential of transcription factors for gene regulatory rewiring. Nature Ecology and Evolution. 2018;2(10):1633-1643. doi:10.1038/s41559-018-0651-y
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2018 | Journal Article | IST-REx-ID: 82
Chaudhry W, Pleska M, Shah N, et al. Leaky resistance and the conditions for the existence of lytic bacteriophage. PLoS Biology. 2018;16(8). doi:10.1371/journal.pbio.2005971
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2018 | Research Data | IST-REx-ID: 5569
Bergmiller T, Nikolic N. Time-Lapse Microscopy Data. IST Austria; 2018. doi:10.15479/AT:ISTA:74
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2018 | Journal Article | IST-REx-ID: 19
Palmer A, Chait RP, Kishony R. Nonoptimal gene expression creates latent potential for antibiotic resistance. Molecular Biology and Evolution. 2018;35(11):2669-2684. doi:10.1093/molbev/msy163
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| PubMed | Europe PMC
2018 | Preprint | IST-REx-ID: 196
Lang M, Shkolnikov M. Harmonic dynamics of the Abelian sandpile. ArXiv. 2018.
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2018 | Journal Article | IST-REx-ID: 305
Misun P, Birchler A, Lang M, Hierlemann A, Frey O. Fabrication and operation of microfluidic hanging drop networks. Methods in Molecular Biology. 2018;1771:183-202. doi:10.1007/978-1-4939-7792-5_15
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2018 | Thesis | IST-REx-ID: 26
Steinrück M. The Influence of Sequence Context on the Evolution of Bacterial Gene Expression. IST Austria; 2018. doi:10.15479/AT:ISTA:th1059
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2018 | Journal Article | IST-REx-ID: 723
Oliveto P, Paixao T, Pérez Heredia J, Sudholt D, Trubenova B. How to escape local optima in black box optimisation when non elitism outperforms elitism. Algorithmica. 2018;80(5):1604-1633. doi:10.1007/s00453-017-0369-2
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