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113 Publications

2020 | Research Data | IST-REx-ID: 8951 | OA
Nagy-Staron, A. A. (2020). Sequences of gene regulatory network permutations for the article “Local genetic context shapes the function of a gene regulatory network.” IST Austria. https://doi.org/10.15479/AT:ISTA:8951
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2020 | Journal Article | IST-REx-ID: 7652 | OA
Tomanek, I., Grah, R., Lagator, M., Andersson, A. M. C., Bollback, J. P., Tkačik, G., & Guet, C. C. (2020). Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. Springer Nature. https://doi.org/10.1038/s41559-020-1132-7
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2020 | Thesis | IST-REx-ID: 8653
Tomanek, I. (2020). The evolution of gene expression by copy number and point mutations. IST Austria. https://doi.org/10.15479/AT:ISTA:8653
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2020 | Journal Article | IST-REx-ID: 7569 | OA
Grah, R., & Friedlander, T. (2020). The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007642
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2019 | Journal Article | IST-REx-ID: 196 | OA
Lang, M., & Shkolnikov, M. (2019). Harmonic dynamics of the Abelian sandpile. Proceedings of the National Academy of Sciences. National Academy of Sciences. https://doi.org/10.1073/pnas.1812015116
View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC | arXiv
 
2019 | Conference Paper | IST-REx-ID: 7147
Guet, C. C., Henzinger, T. A., Igler, C., Petrov, T., & Sezgin, A. (2019). Transient memory in gene regulation. In 17th International Conference on Computational Methods in Systems Biology (Vol. 11773, pp. 155–187). Trieste, Italy: Springer Nature. https://doi.org/10.1007/978-3-030-31304-3_9
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2019 | Journal Article | IST-REx-ID: 6465 | OA
Chassin, H., Müller, M., Tigges, M., Scheller, L., Lang, M., & Fussenegger, M. (2019). A modular degron library for synthetic circuits in mammalian cells. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-019-09974-5
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2019 | Research Data | IST-REx-ID: 7016 | OA
Tomanek, I. (2019). Data for the paper “Gene amplification as a form of population-level gene expression regulation.” IST Austria. https://doi.org/10.15479/AT:ISTA:7016
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2019 | Journal Article | IST-REx-ID: 138 | OA
Nikolic, N. (2019). Autoregulation of bacterial gene expression: lessons from the MazEF toxin–antitoxin system. Current Genetics. Springer. https://doi.org/10.1007/s00294-018-0879-8
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2019 | Journal Article | IST-REx-ID: 6717 | OA
Igler, C., & Abedon, S. T. (2019). Commentary: A host-produced quorum-sensing autoinducer controls a phage lysis-lysogeny decision. Frontiers in Microbiology. Frontiers. https://doi.org/10.3389/fmicb.2019.01171
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2019 | Journal Article | IST-REx-ID: 6784 | OA
Ruess, J., Pleska, M., Guet, C. C., & Tkačik, G. (2019). Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007168
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2019 | Research Data Reference | IST-REx-ID: 9786
Ruess, J., Pleska, M., Guet, C. C., & Tkačik, G. (2019). Supporting text and results. Public Library of Science. https://doi.org/10.1371/journal.pcbi.1007168.s001
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2019 | Thesis | IST-REx-ID: 6371 | OA
Igler, C. (2019). On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation. IST Austria. https://doi.org/10.15479/AT:ISTA:6371
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2018 | Journal Article | IST-REx-ID: 19 | OA
Palmer, A., Chait, R. P., & Kishony, R. (2018). Nonoptimal gene expression creates latent potential for antibiotic resistance. Molecular Biology and Evolution. NLM . https://doi.org/10.1093/molbev/msy163
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2018 | Journal Article | IST-REx-ID: 723 | OA
Oliveto, P., Paixao, T., Pérez Heredia, J., Sudholt, D., & Trubenova, B. (2018). How to escape local optima in black box optimisation when non elitism outperforms elitism. Algorithmica. Springer. https://doi.org/10.1007/s00453-017-0369-2
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2018 | Journal Article | IST-REx-ID: 503
Tomasek, K., Bergmiller, T., & Guet, C. C. (2018). Lack of cations in flow cytometry buffers affect fluorescence signals by reducing membrane stability and viability of Escherichia coli strains. Journal of Biotechnology. Elsevier. https://doi.org/10.1016/j.jbiotec.2018.01.008
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2018 | Research Data | IST-REx-ID: 5569 | OA
Bergmiller, T., & Nikolic, N. (2018). Time-lapse microscopy data. IST Austria. https://doi.org/10.15479/AT:ISTA:74
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2018 | Journal Article | IST-REx-ID: 5984 | OA
Morri, M., Sanchez-Romero, I., Tichy, A.-M., Kainrath, S., Gerrard, E. J., Hirschfeld, P., … Janovjak, H. L. (2018). Optical functionalization of human class A orphan G-protein-coupled receptors. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-018-04342-1
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2018 | Journal Article | IST-REx-ID: 161 | OA
De Martino, D., Mc, A. A., Bergmiller, T., Guet, C. C., & Tkačik, G. (2018). Statistical mechanics for metabolic networks during steady state growth. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-018-05417-9
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2018 | Journal Article | IST-REx-ID: 438 | OA
Nikolic, N., Bergmiller, T., Vandervelde, A., Albanese, T., Gelens, L., & Moll, I. (2018). Autoregulation of mazEF expression underlies growth heterogeneity in bacterial populations. Nucleic Acids Research. Oxford University Press. https://doi.org/10.1093/nar/gky079
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