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90 Publications
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2020 | Research Data | IST-REx-ID: 7383 | 
Grah R. 2020. Matlab scripts for the Paper: Gene Amplification as a Form of Population-Level Gene Expression regulation, IST Austria, 10.15479/AT:ISTA:7383.
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2020 | Thesis | IST-REx-ID: 7680
Kainrath S. 2020. Synthetic tools for optogenetic and chemogenetic inhibition of cellular signals. IST Austria.
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2020 | Research Data | IST-REx-ID: 8951 |
Nagy-Staron AA. 2020. Sequences of gene regulatory network permutations for the article ‘Local genetic context shapes the function of a gene regulatory network’, IST Austria, 10.15479/AT:ISTA:8951.
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2020 | Thesis | IST-REx-ID: 8155 |
Grah R. 2020. Gene regulation across scales – how biophysical constraints shape evolution. IST Austria.
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2020 | Journal Article | IST-REx-ID: 7569 |
Grah R, Friedlander T. 2020. The relation between crosstalk and gene regulation form revisited. PLOS Computational Biology. 16(2), e1007642.
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2020 | Preprint | IST-REx-ID: 7675 |
Grah R, Zoller B, Tkačik G. 2020. Normative models of enhancer function. bioRxiv, 10.1101/2020.04.08.029405.
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| Download Preprint (ext.)
2020 | Thesis | IST-REx-ID: 8653
Tomanek I. 2020. The evolution of gene expression by copy number and point mutations. IST Austria.
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2020 | Journal Article | IST-REx-ID: 7652 |
Tomanek I, Grah R, Lagator M, Andersson AMC, Bollback JP, Tkačik G, Guet CC. 2020. Gene amplification as a form of population-level gene expression regulation. Nature Ecology & Evolution. 4(4), 612–625.
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2019 | Journal Article | IST-REx-ID: 138 |
Nikolic N. 2019. Autoregulation of bacterial gene expression: lessons from the MazEF toxin–antitoxin system. Current Genetics. 65(1), 133–138.
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2019 | Journal Article | IST-REx-ID: 196 |
Lang M, Shkolnikov M. 2019. Harmonic dynamics of the Abelian sandpile. Proceedings of the National Academy of Sciences. 116(8), 2821–2830.
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| PubMed | Europe PMC
| arXiv
2019 | Journal Article | IST-REx-ID: 6465 |
Chassin H, Müller M, Tigges M, Scheller L, Lang M, Fussenegger M. 2019. A modular degron library for synthetic circuits in mammalian cells. Nature Communications. 10(1), 2013.
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2019 | Journal Article | IST-REx-ID: 6717 |
Igler C, Abedon ST. 2019. Commentary: A host-produced quorum-sensing autoinducer controls a phage lysis-lysogeny decision. Frontiers in Microbiology. 10, 1171.
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2019 | Thesis | IST-REx-ID: 6371 |
Igler C. 2019. On the nature of gene regulatory design - The biophysics of transcription factor binding shapes gene regulation. IST Austria.
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2019 | Journal Article | IST-REx-ID: 6784 |
Ruess J, Pleska M, Guet CC, Tkačik G. 2019. Molecular noise of innate immunity shapes bacteria-phage ecologies. PLoS Computational Biology. 15(7), e1007168.
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2019 | Research Data | IST-REx-ID: 7016 |
Tomanek I. 2019. Data for the paper ‘Gene amplification as a form of population-level gene expression regulation’, IST Austria, 10.15479/AT:ISTA:7016.
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2018 | Journal Article | IST-REx-ID: 19 |
Palmer A, Chait RP, Kishony R. 2018. Nonoptimal gene expression creates latent potential for antibiotic resistance. Molecular Biology and Evolution. 35(11), 2669–2684.
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| Download Submitted Version (ext.)
| PubMed | Europe PMC
2018 | Journal Article | IST-REx-ID: 457
Pleska M, Lang M, Refardt D, Levin B, Guet CC. 2018. Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity. Nature Ecology and Evolution. 2(2), 359–366.
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