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51 Publications

2020 | Journal Article | IST-REx-ID: 7427
Salicylic acid targets protein phosphatase 2A to attenuate growth in plants
S. Tan, M.F. Abas, I. Verstraeten, M. Glanc, G. Molnar, J. Hajny, P. Lasák, I. Petřík, E. Russinova, J. Petrášek, O. Novák, J. Pospíšil, J. Friml, Current Biology 30 (n.d.) 381–395.e8.
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2020 | Journal Article | IST-REx-ID: 7490 | OA
Evolutionarily unique mechanistic framework of clathrin-mediated endocytosis in plants
M. Narasimhan, A.J. Johnson, R. Prizak, W. Kaufmann, S. Tan, B.E. Casillas Perez, J. Friml, ELife 9 (2020).
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2020 | Journal Article | IST-REx-ID: 7600 | OA
The lipid code-dependent phosphoswitch PDK1–D6PK activates PIN-mediated auxin efflux in Arabidopsis
S. Tan, X. Zhang, W. Kong, X.-L. Yang, G. Molnar, Z. Vondráková, R. Filepová, J. Petrášek, J. Friml, H.-W. Xue, Nature Plants 6 (2020) 556–569.
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2020 | Journal Article | IST-REx-ID: 7619 | OA
Arabidopsis flippases cooperate with ARF GTPase exchange factors to regulate the trafficking and polarity of PIN auxin transporters
X. Zhang, M. Adamowski, P. Marhavá, S. Tan, Y. Zhang, L. Rodriguez Solovey, M. Zwiewka, V. Pukyšová, A.S. Sánchez, V.K. Raxwal, C.S. Hardtke, T. Nodzynski, J. Friml, The Plant Cell 32 (2020) 1644–1664.
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2020 | Journal Article | IST-REx-ID: 7805
Synergistic on Auxin and Cytokinin 1 positively regulates growth and attenuates soil pathogen resistance
A. Hurny, C. Cuesta, N. Cavallari, K. Ötvös, J. Duclercq, L. Dokládal, J.C. Montesinos López, M. Gallemi, H. Semeradova, T. Rauter, I. Stenzel, G. Persiau, F. Benade, R. Bhalearo, E. Sýkorová, A. Gorzsás, J. Sechet, G. Mouille, I. Heilmann, G. De Jaeger, J. Ludwig-Müller, E. Benková, Nature Communications 11 (2020) 2170.
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2020 | Journal Article | IST-REx-ID: 7814 | OA
SCOPES: Sparking curiosity through Open-Source platforms in education and science
R.J. Beattie, S. Hippenmeyer, F. Pauler, Frontiers in Education 5 (2020).
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2020 | Journal Article | IST-REx-ID: 7815 | OA
Lineage tracing and clonal analysis in developing cerebral cortex using mosaic analysis with double markers (MADM)
R.J. Beattie, C. Streicher, N. Amberg, G.T. Cheung, X. Contreras, A.H. Hansen, S. Hippenmeyer, Journal of Visual Experiments (JoVE) (2020).
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2020 | Journal Article | IST-REx-ID: 7875 | OA
Microtubules control cellular shape and coherence in amoeboid migrating cells
A. Kopf, J. Renkawitz, R. Hauschild, I. Girkontaite, K. Tedford, J. Merrin, O. Thorn-Seshold, D. Trauner, H. Häcker, K.D. Fischer, E. Kiermaier, M.K. Sixt, The Journal of Cell Biology 219 (2020) e201907154.
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2020 | Thesis | IST-REx-ID: 7902
Genetic dissection of neural development in health and disease at single cell resolution
X. Contreras, Genetic Dissection of Neural Development in Health and Disease at Single Cell Resolution, IST Austria, 2020.
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2020 | Journal Article | IST-REx-ID: 7885
Cellular locomotion using environmental topography
A. REVERSAT, F.R. Gärtner, J. Merrin, J.A. Stopp, S. Tasciyan, J.L. Aguilera Servin, I. de Vries, R. Hauschild, M. Hons, M. Piel, A. Callan-Jones, R. Voituriez, M.K. Sixt, Nature (2020).
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2020 | Journal Article | IST-REx-ID: 7580 | OA
Stochastic activation and bistability in a Rab GTPase regulatory network
U. Bezeljak, H. Loya, B.M. Kaczmarek, T.E. Saunders, M. Loose, Proceedings of the National Academy of Sciences 117 (2020) 6504–6549.
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2020 | Journal Article | IST-REx-ID: 8002 | OA
Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots
L. Hörmayer, J.C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, J. Friml, Proceedings of the National Academy of Sciences 117 (2020).
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2020 | Journal Article | IST-REx-ID: 8139
Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis
A.J. Johnson, N. Gnyliukh, W. Kaufmann, M. Narasimhan, G. Vert, S. Bednarek, J. Friml, Journal of Cell Science (2020).
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2020 | Journal Article | IST-REx-ID: 8162 | OA
Cell-type specificity of genomic imprinting in cerebral cortex
S. Laukoter, F. Pauler, R.J. Beattie, N. Amberg, A.H. Hansen, C. Streicher, T. Penz, C. Bock, S. Hippenmeyer, Neuron 107 (n.d.) 1–20.
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2020 | Journal Article | IST-REx-ID: 8142 | OA
Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage
J.C. Montesinos López, A. Abuzeineh, A. Kopf, A. Juanes Garcia, K. Ötvös, J. Petrášek, M.K. Sixt, E. Benková, The Embo Journal (2020).
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2019 | Journal Article | IST-REx-ID: 6025 | OA
Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm cell migration
D. Capek, M. Smutny, A.M. Tichy, M. Morri, H.L. Janovjak, C.-P.J. Heisenberg, ELife 8 (2019).
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2019 | Journal Article | IST-REx-ID: 6046 | OA
Temporal order and precision of complex stress responses in individual bacteria
K. Mitosch, G. Rieckh, M.T. Bollenbach, Molecular Systems Biology 15 (2019).
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2019 | Thesis | IST-REx-ID: 6269 | OA
Clathrin-Mediated endocytosis, post-endocytic trafficking and their regulatory controls in plants
M. Narasimhan, Clathrin-Mediated Endocytosis, Post-Endocytic Trafficking and Their Regulatory Controls in Plants , IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 6392 | OA
Quantitative investigation of gene expression principles through combinatorial drug perturbation and theory
M. Lukacisin, Quantitative Investigation of Gene Expression Principles through Combinatorial Drug Perturbation and Theory, IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 6435 | OA
Collective defenses of garden ants against a fungal pathogen
B.E. Casillas Perez, Collective Defenses of Garden Ants against a Fungal Pathogen, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6611 | OA
PIN2 polarity establishment in arabidopsis in the absence of an intact cytoskeleton
M. Glanc, M. Fendrych, J. Friml, Biomolecules 9 (2019).
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2019 | Thesis | IST-REx-ID: 6849
The role of CCK-interneurons in regulating hippocampal network dynamics
D.K. Rangel Guerrero, The Role of CCK-Interneurons in Regulating Hippocampal Network Dynamics, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 6897
Root gravity response module guides differential growth determining both root bending and apical hook formation in Arabidopsis
Q. Zhu, M. Gallemi, J. Pospíšil, P. Žádníková, M. Strnad, E. Benková, Development 146 (2019).
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2019 | Thesis | IST-REx-ID: 6947
Lymph node mechanics: Deciphering the interplay between stroma contractility, morphology and lymphocyte trafficking
F.P. Assen, Lymph Node Mechanics: Deciphering the Interplay between Stroma Contractility, Morphology and Lymphocyte Trafficking, IST Austria, 2019.
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2019 | Thesis | IST-REx-ID: 7172 | OA
Molecular mechanisms of endomembrane trafficking in Arabidopsis thaliana
M.K. Vasileva, Molecular Mechanisms of Endomembrane Trafficking in Arabidopsis Thaliana, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 7197 | OA
Cooperative ordering of treadmilling filaments in cytoskeletal networks of FtsZ and its crosslinker ZapA
P.R. Dos Santos Caldas, M.D. Lopez Pelegrin, D.J.G. Pearce, N.B. Budanur, J. Brugués, M. Loose, Nature Communications 10 (2019).
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2019 | Journal Article | IST-REx-ID: 7406
Isolation of synaptic vesicles from genetically engineered cultured neurons
C. Mckenzie, M. Spanova, A.J. Johnson, S. Kainrath, V. Zheden, H.H. Sitte, H.L. Janovjak, Journal of Neuroscience Methods 312 (2019) 114–121.
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2019 | Journal Article | IST-REx-ID: 6508
Bulk actin dynamics drive phase segregation in zebrafish oocytes
S. Shamipour, R. Kardos, S. Xue, B. Hof, E.B. Hannezo, C.-P.J. Heisenberg, Cell 177 (2019) 1463–1479.e18.
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2019 | Thesis | IST-REx-ID: 7186 | OA
Mechanosensation of tight junctions depends on ZO-1 phase separation and flow
C. Schwayer, Mechanosensation of Tight Junctions Depends on ZO-1 Phase Separation and Flow, IST Austria, 2019.
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2019 | Journal Article | IST-REx-ID: 7001
Mechanosensation of tight junctions depends on ZO-1 phase separation and flow
C. Schwayer, S. Shamipour, K. Pranjic-Ferscha, A. Schauer, M. Balda, M. Tada, K. Matter, C.-P.J. Heisenberg, Cell 179 (2019) 937–952.e18.
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2019 | Journal Article | IST-REx-ID: 5789
Fluidization-mediated tissue spreading by mitotic cell rounding and non-canonical Wnt signalling
N. Petridou, S. Grigolon, G. Salbreux, E.B. Hannezo, C.-P.J. Heisenberg, Nature Cell Biology 21 (2019) 169–178.
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2019 | Journal Article | IST-REx-ID: 6087
Lateral inhibition in cell specification mediated by mechanical signals modulating TAZ activity
P. Xia, D.J. Gütl, V. Zheden, C.-P.J. Heisenberg, Cell 176 (2019) 1379–1392.e14.
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2019 | Journal Article | IST-REx-ID: 6351 | OA
Re-activation of stem cell pathways for pattern restoration in plant wound healing
P. Marhavá, L. Hörmayer, S. Yoshida, P. Marhavý, E. Benková, J. Friml, Cell 177 (2019) 957–969.e13.
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2019 | Thesis | IST-REx-ID: 6546 | OA
The role of a highly conserved major facilitator superfamily member in Drosophila embryonic macrophage migration
K. Valosková, The Role of a Highly Conserved Major Facilitator Superfamily Member in Drosophila Embryonic Macrophage Migration, IST Austria, 2019.
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2018 | Journal Article | IST-REx-ID: 503 View | DOI
 
2018 | Thesis | IST-REx-ID: 395 | OA
The branched chain amino acids in autism spectrum disorders
D.-C. Tarlungeanu, The Branched Chain Amino Acids in Autism Spectrum Disorders , IST Austria, 2018.
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2018 | Journal Article | IST-REx-ID: 402
Lymph node blood vessels provide exit routes for metastatic tumor cell dissemination in mice
M. Brown, F.P. Assen, A.F. Leithner, J. Abe, H. Schachner, G. Asfour, Z. Bagó Horváth, J. Stein, P. Uhrin, M.K. Sixt, D. Kerjaschki, Science 359 (2018) 1408–1411.
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2018 | Thesis | IST-REx-ID: 323 | OA
Branched actin networks in dendritic cell biology
A.F. Leithner, Branched Actin Networks in Dendritic Cell Biology, IST Austria, 2018.
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2017 | Journal Article | IST-REx-ID: 803 | OA
DNA cross-bridging shapes a single nucleus from a set of mitotic chromosomes
M. Samwer, M. Schneider, R. Hoefler, P.S. Schmalhorst, J. Jude, J. Zuber, D. Gerlic, Cell 170 (2017) 956–972.
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2017 | Journal Article | IST-REx-ID: 944
Mosaic analysis with double markers reveals distinct sequential functions of Lgl1 in neural stem cells
R.J. Beattie, M.P. Postiglione, L. Burnett, S. Laukoter, C. Streicher, F. Pauler, G. Xiao, O. Klezovitch, V. Vasioukhin, T. Ghashghaei, S. Hippenmeyer, Neuron 94 (2017) 517–533.e3.
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2017 | Journal Article | IST-REx-ID: 946 | OA
Live tracking of moving samples in confocal microscopy for vertically grown roots
D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
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2017 | Journal Article | IST-REx-ID: 1078 | OA
Light sheet fluorescence microscopy of plant roots growing on the surface of a gel
D. Von Wangenheim, R. Hauschild, J. Friml, Journal of Visualized Experiments JoVE 2017 (2017) e55044.
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2017 | Journal Article | IST-REx-ID: 1117 | OA
Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse
C. Chen, I. Arai, R. Satterield, S. Young, P.M. Jonas, Cell Reports 18 (2017) 723–736.
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2017 | Journal Article | IST-REx-ID: 1213
Single-molecule measurements to study polymerization dynamics of FtsZ-FtsA copolymers
N. Baranova, M. Loose, Methods in Cell Biology 137 (2017) 355–370.
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2016 | Thesis | IST-REx-ID: 1129
Quantitative analysis of haptotactic cell migration
J. Schwarz, Quantitative Analysis of Haptotactic Cell Migration, IST Austria, 2016.
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2016 | Journal Article | IST-REx-ID: 1597
Quantitative analysis of dendritic cell haptotaxis
J. Schwarz, M.K. Sixt, Methods in Enzymology 570 (2016) 567–581.
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2015 | Journal Article | IST-REx-ID: 1640 | OA
Cytokinin response factors regulate PIN-FORMED auxin transporters
M. Šimášková, J. O’Brien, M. Khan-Djamei, G. Van Noorden, K. Ötvös, A. Vieten, I. De Clercq, J. Van Haperen, C. Cuesta, K. Hoyerová, S. Vanneste, P. Marhavý, K.T. Wabnik, F. Van Breusegem, M. Nowack, A. Murphy, J. Friml, D. Weijers, T. Beeckman, E. Benková, Nature Communications 6 (2015).
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2013 | Journal Article | IST-REx-ID: 2282 | OA
Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading during zebrafish epiboly
P. Campinho, M. Behrndt, J. Ranft, T. Risler, N. Minc, C.-P.J. Heisenberg, Nature Cell Biology 15 (2013) 1405–1414.
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2013 | Thesis | IST-REx-ID: 1406
Mechanics of zebrafish epiboly: Tension-oriented cell divisions limit anisotropic tissue tension in epithelial spreading
P. Campinho, Mechanics of Zebrafish Epiboly: Tension-Oriented Cell Divisions Limit Anisotropic Tissue Tension in Epithelial Spreading, IST Austria, 2013.
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube
P. Stockinger, C.-P.J. Heisenberg, J.-L. Maître, Development 138 (2011) 4673–4683.
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