[{"status":"public","type":"journal_article","_id":"2201","title":"Nonadiabatic preparation of spin crystals with ultracold polar molecules","author":[{"first_name":"Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","full_name":"Lemeshko, Mikhail","orcid":"0000-0002-6990-7802","last_name":"Lemeshko"},{"full_name":"Krems, Roman","last_name":"Krems","first_name":"Roman"},{"full_name":"Weimer, Hendrik","last_name":"Weimer","first_name":"Hendrik"}],"publist_id":"4772","article_processing_charge":"No","extern":"1","user_id":"8b945eb4-e2f2-11eb-945a-df72226e66a9","citation":{"chicago":"Lemeshko, Mikhail, Roman Krems, and Hendrik Weimer. “Nonadiabatic Preparation of Spin Crystals with Ultracold Polar Molecules.” Physical Review Letters. American Physical Society, 2012. https://doi.org/10.1103/PhysRevLett.109.035301.","ista":"Lemeshko M, Krems R, Weimer H. 2012. Nonadiabatic preparation of spin crystals with ultracold polar molecules. Physical Review Letters. 109(3).","mla":"Lemeshko, Mikhail, et al. “Nonadiabatic Preparation of Spin Crystals with Ultracold Polar Molecules.” Physical Review Letters, vol. 109, no. 3, American Physical Society, 2012, doi:10.1103/PhysRevLett.109.035301.","ieee":"M. Lemeshko, R. Krems, and H. Weimer, “Nonadiabatic preparation of spin crystals with ultracold polar molecules,” Physical Review Letters, vol. 109, no. 3. American Physical Society, 2012.","short":"M. Lemeshko, R. Krems, H. Weimer, Physical Review Letters 109 (2012).","ama":"Lemeshko M, Krems R, Weimer H. Nonadiabatic preparation of spin crystals with ultracold polar molecules. Physical Review Letters. 2012;109(3). doi:10.1103/PhysRevLett.109.035301","apa":"Lemeshko, M., Krems, R., & Weimer, H. (2012). Nonadiabatic preparation of spin crystals with ultracold polar molecules. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.109.035301"},"date_updated":"2021-11-16T08:01:02Z","month":"07","intvolume":" 109","publisher":"American Physical Society","main_file_link":[{"url":"http://arxiv.org/abs/1203.0010","open_access":"1"}],"oa":1,"oa_version":"None","abstract":[{"lang":"eng","text":"We study the growth dynamics of ordered structures of strongly interacting polar molecules in optical lattices. Using a dipole blockade of microwave excitations, we map the system onto an interacting spin-1/2 model possessing ground states with crystalline order, and describe a way to prepare these states by nonadiabatically driving the transitions between molecular rotational levels. The proposed technique bypasses the need to cross a phase transition and allows for the creation of ordered domains of considerably larger size compared to approaches relying on adiabatic preparation."}],"volume":109,"date_published":"2012-07-16T00:00:00Z","related_material":{"link":[{"relation":"erratum","url":"https://doi.org/10.1103/PhysRevLett.109.049901"}]},"issue":"3","doi":"10.1103/PhysRevLett.109.035301","date_created":"2018-12-11T11:56:17Z","day":"16","language":[{"iso":"eng"}],"publication":"Physical Review Letters","publication_status":"published","year":"2012"},{"abstract":[{"text":"We propose a method for sensitive parallel detection of low-frequency electromagnetic fields based on the fine structure interactions in paramagnetic polar molecules. Compared to the recently implemented scheme employing ultracold 87Rb atoms by Böhi, the technique based on molecules offers a 100-fold higher sensitivity, the possibility to measure both the electric and magnetic field components, and a probe of a wide range of frequencies from the dc limit to the THz regime.","lang":"eng"}],"publisher":"American Physical Society","quality_controlled":0,"oa":1,"main_file_link":[{"url":"http://arxiv.org/abs/1202.1857","open_access":"1"}],"month":"07","intvolume":" 86","year":"2012","publication_status":"published","day":"13","publication":"Physical Review A - Atomic, Molecular, and Optical Physics","doi":"10.1103/PhysRevA.86.013409","date_published":"2012-07-13T00:00:00Z","volume":86,"issue":"1","date_created":"2018-12-11T11:56:18Z","_id":"2202","type":"journal_article","status":"public","citation":{"mla":"Alyabyshev, Sergey, et al. “Sensitive Imaging of Electromagnetic Fields with Paramagnetic Polar Molecules.” Physical Review A - Atomic, Molecular, and Optical Physics, vol. 86, no. 1, American Physical Society, 2012, doi:10.1103/PhysRevA.86.013409.","ieee":"S. Alyabyshev, M. Lemeshko, and R. Krems, “Sensitive imaging of electromagnetic fields with paramagnetic polar molecules,” Physical Review A - Atomic, Molecular, and Optical Physics, vol. 86, no. 1. American Physical Society, 2012.","short":"S. Alyabyshev, M. Lemeshko, R. Krems, Physical Review A - Atomic, Molecular, and Optical Physics 86 (2012).","ama":"Alyabyshev S, Lemeshko M, Krems R. Sensitive imaging of electromagnetic fields with paramagnetic polar molecules. Physical Review A - Atomic, Molecular, and Optical Physics. 2012;86(1). doi:10.1103/PhysRevA.86.013409","apa":"Alyabyshev, S., Lemeshko, M., & Krems, R. (2012). Sensitive imaging of electromagnetic fields with paramagnetic polar molecules. Physical Review A - Atomic, Molecular, and Optical Physics. American Physical Society. https://doi.org/10.1103/PhysRevA.86.013409","chicago":"Alyabyshev, Sergey, Mikhail Lemeshko, and Roman Krems. “Sensitive Imaging of Electromagnetic Fields with Paramagnetic Polar Molecules.” Physical Review A - Atomic, Molecular, and Optical Physics. American Physical Society, 2012. https://doi.org/10.1103/PhysRevA.86.013409.","ista":"Alyabyshev S, Lemeshko M, Krems R. 2012. Sensitive imaging of electromagnetic fields with paramagnetic polar molecules. Physical Review A - Atomic, Molecular, and Optical Physics. 86(1)."},"date_updated":"2021-01-12T06:55:57Z","extern":1,"publist_id":"4773","author":[{"first_name":"Sergey","full_name":"Alyabyshev, Sergey V","last_name":"Alyabyshev"},{"first_name":"Mikhail","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6990-7802","full_name":"Mikhail Lemeshko","last_name":"Lemeshko"},{"last_name":"Krems","full_name":"Krems, Roman V","first_name":"Roman"}],"title":"Sensitive imaging of electromagnetic fields with paramagnetic polar molecules"},{"user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","citation":{"ista":"Liang H, Hippenmeyer S, Ghashghaei H. 2012. A Nestin-cre transgenic mouse is insufficient for recombination in early embryonic neural progenitors. Biology open. 1(12), 1200–1203.","chicago":"Liang, Huixuan, Simon Hippenmeyer, and H. Ghashghaei. “A Nestin-Cre Transgenic Mouse Is Insufficient for Recombination in Early Embryonic Neural Progenitors.” Biology Open. The Company of Biologists, 2012. https://doi.org/10.1242/bio.20122287.","apa":"Liang, H., Hippenmeyer, S., & Ghashghaei, H. (2012). A Nestin-cre transgenic mouse is insufficient for recombination in early embryonic neural progenitors. Biology Open. The Company of Biologists. https://doi.org/10.1242/bio.20122287","ama":"Liang H, Hippenmeyer S, Ghashghaei H. A Nestin-cre transgenic mouse is insufficient for recombination in early embryonic neural progenitors. Biology open. 2012;1(12):1200-1203. doi:10.1242/bio.20122287","ieee":"H. Liang, S. Hippenmeyer, and H. Ghashghaei, “A Nestin-cre transgenic mouse is insufficient for recombination in early embryonic neural progenitors,” Biology open, vol. 1, no. 12. The Company of Biologists, pp. 1200–1203, 2012.","short":"H. Liang, S. Hippenmeyer, H. Ghashghaei, Biology Open 1 (2012) 1200–1203.","mla":"Liang, Huixuan, et al. “A Nestin-Cre Transgenic Mouse Is Insufficient for Recombination in Early Embryonic Neural Progenitors.” Biology Open, vol. 1, no. 12, The Company of Biologists, 2012, pp. 1200–03, doi:10.1242/bio.20122287."},"title":"A Nestin-cre transgenic mouse is insufficient for recombination in early embryonic neural progenitors","author":[{"last_name":"Liang","full_name":"Liang, Huixuan","first_name":"Huixuan"},{"last_name":"Hippenmeyer","orcid":"0000-0003-2279-1061","full_name":"Hippenmeyer, Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87","first_name":"Simon"},{"first_name":"H.","last_name":"Ghashghaei","full_name":"Ghashghaei, H."}],"publist_id":"4682","publisher":"The Company of Biologists","quality_controlled":"1","oa":1,"day":"15","publication":"Biology open","has_accepted_license":"1","year":"2012","doi":"10.1242/bio.20122287","date_published":"2012-12-15T00:00:00Z","date_created":"2018-12-11T11:56:38Z","page":"1200 - 1203","_id":"2263","status":"public","pubrep_id":"387","type":"journal_article","tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","image":"/images/cc_by_nc_sa.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","short":"CC BY-NC-SA (4.0)"},"ddc":["576"],"date_updated":"2021-01-12T06:56:23Z","file_date_updated":"2020-07-14T12:45:35Z","department":[{"_id":"SiHi"}],"oa_version":"Published Version","abstract":[{"text":"Nestin-cre transgenic mice have been widely used to direct recombination to neural stem cells (NSCs) and intermediate neural progenitor cells (NPCs). Here we report that a readily utilized, and the only commercially available, Nestin-cre line is insufficient for directing recombination in early embryonic NSCs and NPCs. Analysis of recombination efficiency in multiple cre-dependent reporters and a genetic mosaic line revealed consistent temporal and spatial patterns of recombination in NSCs and NPCs. For comparison we utilized a knock-in Emx1cre line and found robust recombination in NSCs and NPCs in ventricular and subventricular zones of the cerebral cortices as early as embryonic day 12.5. In addition we found that the rate of Nestin-cre driven recombination only reaches sufficiently high levels in NSCs and NPCs during late embryonic and early postnatal periods. These findings are important when commercially available cre lines are considered for directing recombination to embryonic NSCs and NPCs.","lang":"eng"}],"month":"12","intvolume":" 1","scopus_import":1,"file":[{"date_created":"2018-12-12T10:13:09Z","file_name":"IST-2015-387-v1+1_1200.full.pdf","creator":"system","date_updated":"2020-07-14T12:45:35Z","file_size":726695,"checksum":"605a1800b81227848c361fd6ba7d22ba","file_id":"4990","access_level":"open_access","relation":"main_file","content_type":"application/pdf"}],"language":[{"iso":"eng"}],"publication_status":"published","volume":1,"issue":"12","license":"https://creativecommons.org/licenses/by-nc-sa/4.0/"},{"has_accepted_license":"1","year":"2012","publication_status":"published","day":"13","file":[{"checksum":"5495bb6ee8662cd401b34afb04dfb40f","file_id":"4866","content_type":"application/pdf","relation":"main_file","access_level":"open_access","file_name":"IST-2016-572-v1+1_preiner_2012_AS-draft.pdf","date_created":"2018-12-12T10:11:13Z","file_size":14903860,"date_updated":"2020-07-14T12:45:35Z","creator":"system"}],"language":[{"iso":"eng"}],"page":"139 - 148","doi":"10.2312/EGPGV/EGPGV12/139-148","date_published":"2012-05-13T00:00:00Z","date_created":"2018-12-11T11:56:40Z","abstract":[{"text":"Capturing real-world objects with laser-scanning technology has become an everyday task. Recently, the acquisition of dynamic scenes at interactive frame rates has become feasible. A high-quality visualization of the resulting point cloud stream would require a per-frame reconstruction of object surfaces. Unfortunately, reconstruction computations are still too time-consuming to be applied interactively. In this paper we present a local surface reconstruction and visualization technique that provides interactive feedback for reasonably sized point clouds, while achieving high image quality. Our method is performed entirely on the GPU and in screen pace, exploiting the efficiency of the common rasterization pipeline. The approach is very general, as no assumption is made about point connectivity or sampling density. This naturally allows combining the outputs of multiple scanners in a single visualization, which is useful for many virtual and augmented reality applications. ","lang":"eng"}],"oa_version":"Submitted Version","quality_controlled":"1","publisher":"Eurographics Association","oa":1,"month":"05","date_updated":"2021-01-12T06:56:24Z","citation":{"chicago":"Preiner, Reinhold, Stefan Jeschke, and Michael Wimmer. “Auto Splats: Dynamic Point Cloud Visualization on the GPU,” 139–48. Eurographics Association, 2012. https://doi.org/10.2312/EGPGV/EGPGV12/139-148.","ista":"Preiner R, Jeschke S, Wimmer M. 2012. Auto splats: Dynamic point cloud visualization on the GPU. EGPGV: Eurographics Symposium on Parallel Graphics and Visualization, 139–148.","mla":"Preiner, Reinhold, et al. Auto Splats: Dynamic Point Cloud Visualization on the GPU. Eurographics Association, 2012, pp. 139–48, doi:10.2312/EGPGV/EGPGV12/139-148.","short":"R. Preiner, S. Jeschke, M. Wimmer, in:, Eurographics Association, 2012, pp. 139–148.","ieee":"R. Preiner, S. Jeschke, and M. Wimmer, “Auto splats: Dynamic point cloud visualization on the GPU,” presented at the EGPGV: Eurographics Symposium on Parallel Graphics and Visualization, Calgari, Italy, 2012, pp. 139–148.","ama":"Preiner R, Jeschke S, Wimmer M. Auto splats: Dynamic point cloud visualization on the GPU. In: Eurographics Association; 2012:139-148. doi:10.2312/EGPGV/EGPGV12/139-148","apa":"Preiner, R., Jeschke, S., & Wimmer, M. (2012). Auto splats: Dynamic point cloud visualization on the GPU (pp. 139–148). Presented at the EGPGV: Eurographics Symposium on Parallel Graphics and Visualization, Calgari, Italy: Eurographics Association. https://doi.org/10.2312/EGPGV/EGPGV12/139-148"},"extern":"1","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","ddc":["000"],"publist_id":"4677","author":[{"last_name":"Preiner","full_name":"Preiner, Reinhold","first_name":"Reinhold"},{"full_name":"Jeschke, Stefan","last_name":"Jeschke","id":"44D6411A-F248-11E8-B48F-1D18A9856A87","first_name":"Stefan"},{"full_name":"Wimmer, Michael","last_name":"Wimmer","first_name":"Michael"}],"file_date_updated":"2020-07-14T12:45:35Z","title":"Auto splats: Dynamic point cloud visualization on the GPU","_id":"2267","type":"conference","conference":{"end_date":"2012-05-14","location":"Calgari, Italy","start_date":"2012-05-13","name":"EGPGV: Eurographics Symposium on Parallel Graphics and Visualization"},"status":"public","pubrep_id":"572"},{"type":"journal_article","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"status":"public","_id":"2262","author":[{"first_name":"Bosiljka","full_name":"Tasic, Bosiljka","last_name":"Tasic"},{"first_name":"Kazunari","last_name":"Miyamichi","full_name":"Miyamichi, Kazunari"},{"id":"37B36620-F248-11E8-B48F-1D18A9856A87","first_name":"Simon","last_name":"Hippenmeyer","full_name":"Simon Hippenmeyer","orcid":"0000-0003-2279-1061"},{"full_name":"Dani, Vardhan S.","last_name":"Dani","first_name":"Vardhan"},{"full_name":"Zeng, H.","last_name":"Zeng","first_name":"H."},{"first_name":"William","full_name":"Joo, William","last_name":"Joo"},{"full_name":"Zong, Hui","last_name":"Zong","first_name":"Hui"},{"full_name":"Chen-Tsai, Yanru","last_name":"Chen Tsai","first_name":"Yanru"},{"first_name":"Liqun","last_name":"Luo","full_name":"Luo, Liqun"}],"publist_id":"4683","title":"Extensions of MADM (Mosaic Analysis with Double Markers) in Mice ","date_updated":"2021-01-12T06:56:22Z","citation":{"mla":"Tasic, Bosiljka, et al. “Extensions of MADM (Mosaic Analysis with Double Markers) in Mice .” PLoS One, vol. 7, no. 3, Public Library of Science, 2012, doi:10.1371/journal.pone.0033332.","ieee":"B. Tasic et al., “Extensions of MADM (Mosaic Analysis with Double Markers) in Mice ,” PLoS One, vol. 7, no. 3. Public Library of Science, 2012.","short":"B. Tasic, K. Miyamichi, S. Hippenmeyer, V. Dani, H. Zeng, W. Joo, H. Zong, Y. Chen Tsai, L. Luo, PLoS One 7 (2012).","ama":"Tasic B, Miyamichi K, Hippenmeyer S, et al. Extensions of MADM (Mosaic Analysis with Double Markers) in Mice . PLoS One. 2012;7(3). doi:10.1371/journal.pone.0033332","apa":"Tasic, B., Miyamichi, K., Hippenmeyer, S., Dani, V., Zeng, H., Joo, W., … Luo, L. (2012). Extensions of MADM (Mosaic Analysis with Double Markers) in Mice . PLoS One. Public Library of Science. https://doi.org/10.1371/journal.pone.0033332","chicago":"Tasic, Bosiljka, Kazunari Miyamichi, Simon Hippenmeyer, Vardhan Dani, H. Zeng, William Joo, Hui Zong, Yanru Chen Tsai, and Liqun Luo. “Extensions of MADM (Mosaic Analysis with Double Markers) in Mice .” PLoS One. Public Library of Science, 2012. https://doi.org/10.1371/journal.pone.0033332.","ista":"Tasic B, Miyamichi K, Hippenmeyer S, Dani V, Zeng H, Joo W, Zong H, Chen Tsai Y, Luo L. 2012. Extensions of MADM (Mosaic Analysis with Double Markers) in Mice . PLoS One. 7(3)."},"extern":1,"publisher":"Public Library of Science","quality_controlled":0,"month":"03","intvolume":" 7","abstract":[{"lang":"eng","text":"Mosaic Analysis with Double Markers (MADM) is a method for generating genetically mosaic mice, in which sibling mutant and wild-type cells are labeled with different fluorescent markers. It is a powerful tool that enables analysis of gene function at the single cell level in vivo. It requires transgenic cassettes to be located between the centromere and the mutation in the gene of interest on the same chromosome. Here we compare procedures for introduction of MADM cassettes into new loci in the mouse genome, and describe new approaches for expanding the utility of MADM. We show that: 1) Targeted homologous recombination outperforms random transgenesis in generation of reliably expressed MADM cassettes, 2) MADM cassettes in new genomic loci need to be validated for biallelic and ubiquitous expression, 3) Recombination between MADM cassettes on different chromosomes can be used to study reciprocal chromosomal deletions/duplications, and 4) MADM can be modified to permit transgene expression by combining it with a binary expression system. The advances described in this study expand current, and enable new and more versatile applications of MADM."}],"acknowledgement":"This work was supported by a National Institutes of Health grant to LL (R01-NS050835). BT was a Damon Runyon Fellow and was supported by the Damon Runyon Cancer Research Foundation Grant DRG-1819-04. KM was supported by the Japan Society for the Promotion of Science program for Research Abroad and Human Frontier Science Program Organization (LT00300/2007-L). SH was supported by postdoctoral fellowships from the European Molecular Biology Organization (ALTF 851-2005), Human Frontier Science Program Organization (LT00805/2006-L), and Swiss National Science Foundation (PA00P3_124160 and PA00P3_136482). HZ is a Pew Scholar in Biomedical Sciences, supported by The Pew Charitable Trusts. LL is an investigator of the Howard Hughes Medical Institute. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.","volume":7,"doi":"10.1371/journal.pone.0033332","date_published":"2012-03-27T00:00:00Z","issue":"3","date_created":"2018-12-11T11:56:38Z","license":"https://creativecommons.org/licenses/by/4.0/","publication_status":"published","year":"2012","day":"27","publication":"PLoS One"}]