---
_id: '12901'
article_processing_charge: No
author:
- first_name: Alois
full_name: Schlögl, Alois
id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
last_name: Schlögl
orcid: 0000-0002-5621-8100
- first_name: Janos
full_name: Kiss, Janos
id: 3D3A06F8-F248-11E8-B48F-1D18A9856A87
last_name: Kiss
- first_name: Stefano
full_name: Elefante, Stefano
id: 490F40CE-F248-11E8-B48F-1D18A9856A87
last_name: Elefante
citation:
ama: 'Schlögl A, Kiss J, Elefante S. Is Debian suitable for running an HPC Cluster?
In: AHPC19 - Austrian HPC Meeting 2019 . Institut für Mathematik und wissenschaftliches
Rechnen der Universität Graz; 2019:25.'
apa: 'Schlögl, A., Kiss, J., & Elefante, S. (2019). Is Debian suitable for running
an HPC Cluster? In AHPC19 - Austrian HPC Meeting 2019 (p. 25). Grundlsee,
Austria: Institut für Mathematik und wissenschaftliches Rechnen der Universität
Graz.'
chicago: Schlögl, Alois, Janos Kiss, and Stefano Elefante. “Is Debian Suitable for
Running an HPC Cluster?” In AHPC19 - Austrian HPC Meeting 2019 , 25. Institut
für Mathematik und wissenschaftliches Rechnen der Universität Graz, 2019.
ieee: A. Schlögl, J. Kiss, and S. Elefante, “Is Debian suitable for running an HPC
Cluster?,” in AHPC19 - Austrian HPC Meeting 2019 , Grundlsee, Austria,
2019, p. 25.
ista: 'Schlögl A, Kiss J, Elefante S. 2019. Is Debian suitable for running an HPC
Cluster? AHPC19 - Austrian HPC Meeting 2019 . AHPC: Austrian HPC Meeting, 25.'
mla: Schlögl, Alois, et al. “Is Debian Suitable for Running an HPC Cluster?” AHPC19
- Austrian HPC Meeting 2019 , Institut für Mathematik und wissenschaftliches
Rechnen der Universität Graz, 2019, p. 25.
short: A. Schlögl, J. Kiss, S. Elefante, in:, AHPC19 - Austrian HPC Meeting 2019
, Institut für Mathematik und wissenschaftliches Rechnen der Universität Graz,
2019, p. 25.
conference:
end_date: 2019-02-27
location: Grundlsee, Austria
name: 'AHPC: Austrian HPC Meeting'
start_date: 2019-02-25
date_created: 2023-05-05T12:48:48Z
date_published: 2019-02-27T00:00:00Z
date_updated: 2023-05-16T07:29:32Z
day: '27'
ddc:
- '000'
department:
- _id: ScienComp
file:
- access_level: open_access
checksum: acc8272027faaf30709c51ac5c58ffa4
content_type: application/pdf
creator: dernst
date_created: 2023-05-16T07:27:09Z
date_updated: 2023-05-16T07:27:09Z
file_id: '12970'
file_name: 2019_AHPC_Schloegl.pdf
file_size: 1097603
relation: main_file
success: 1
file_date_updated: 2023-05-16T07:27:09Z
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://vsc.ac.at/fileadmin/user_upload/vsc/conferences/ahpc19/BOOKLET_AHPC19.pdf
month: '02'
oa: 1
oa_version: Published Version
page: '25'
publication: 'AHPC19 - Austrian HPC Meeting 2019 '
publication_status: published
publisher: Institut für Mathematik und wissenschaftliches Rechnen der Universität
Graz
status: public
title: Is Debian suitable for running an HPC Cluster?
type: conference_abstract
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2019'
...
---
_id: '11060'
abstract:
- lang: eng
text: The inner nuclear membrane (INM) is a subdomain of the endoplasmic reticulum
(ER) that is gated by the nuclear pore complex. It is unknown whether proteins
of the INM and ER are degraded through shared or distinct pathways in mammalian
cells. We applied dynamic proteomics to profile protein half-lives and report
that INM and ER residents turn over at similar rates, indicating that the INM’s
unique topology is not a barrier to turnover. Using a microscopy approach, we
observed that the proteasome can degrade INM proteins in situ. However, we also
uncovered evidence for selective, vesicular transport-mediated turnover of a single
INM protein, emerin, that is potentiated by ER stress. Emerin is rapidly cleared
from the INM by a mechanism that requires emerin’s LEM domain to mediate vesicular
trafficking to lysosomes. This work demonstrates that the INM can be dynamically
remodeled in response to environmental inputs.
article_number: e49796
article_processing_charge: No
article_type: original
author:
- first_name: Abigail
full_name: Buchwalter, Abigail
last_name: Buchwalter
- first_name: Roberta
full_name: Schulte, Roberta
last_name: Schulte
- first_name: Hsiao
full_name: Tsai, Hsiao
last_name: Tsai
- first_name: Juliana
full_name: Capitanio, Juliana
last_name: Capitanio
- first_name: Martin W
full_name: HETZER, Martin W
id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
last_name: HETZER
orcid: 0000-0002-2111-992X
citation:
ama: Buchwalter A, Schulte R, Tsai H, Capitanio J, Hetzer M. Selective clearance
of the inner nuclear membrane protein emerin by vesicular transport during ER
stress. eLife. 2019;8. doi:10.7554/elife.49796
apa: Buchwalter, A., Schulte, R., Tsai, H., Capitanio, J., & Hetzer, M. (2019).
Selective clearance of the inner nuclear membrane protein emerin by vesicular
transport during ER stress. ELife. eLife Sciences Publications. https://doi.org/10.7554/elife.49796
chicago: Buchwalter, Abigail, Roberta Schulte, Hsiao Tsai, Juliana Capitanio, and
Martin Hetzer. “Selective Clearance of the Inner Nuclear Membrane Protein Emerin
by Vesicular Transport during ER Stress.” ELife. eLife Sciences Publications,
2019. https://doi.org/10.7554/elife.49796.
ieee: A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, and M. Hetzer, “Selective
clearance of the inner nuclear membrane protein emerin by vesicular transport
during ER stress,” eLife, vol. 8. eLife Sciences Publications, 2019.
ista: Buchwalter A, Schulte R, Tsai H, Capitanio J, Hetzer M. 2019. Selective clearance
of the inner nuclear membrane protein emerin by vesicular transport during ER
stress. eLife. 8, e49796.
mla: Buchwalter, Abigail, et al. “Selective Clearance of the Inner Nuclear Membrane
Protein Emerin by Vesicular Transport during ER Stress.” ELife, vol. 8,
e49796, eLife Sciences Publications, 2019, doi:10.7554/elife.49796.
short: A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, M. Hetzer, ELife 8 (2019).
date_created: 2022-04-07T07:45:02Z
date_published: 2019-10-10T00:00:00Z
date_updated: 2023-05-31T06:36:22Z
day: '10'
ddc:
- '570'
doi: 10.7554/elife.49796
extern: '1'
external_id:
pmid:
- '31599721'
file:
- access_level: open_access
checksum: 1e8672a1e9c3dc0a2d3d0dad89673616
content_type: application/pdf
creator: dernst
date_created: 2022-04-08T08:18:01Z
date_updated: 2022-04-08T08:18:01Z
file_id: '11138'
file_name: 2019_eLife_Buchwalter.pdf
file_size: 6984654
relation: main_file
success: 1
file_date_updated: 2022-04-08T08:18:01Z
has_accepted_license: '1'
intvolume: ' 8'
keyword:
- General Immunology and Microbiology
- General Biochemistry
- Genetics and Molecular Biology
- General Medicine
- General Neuroscience
language:
- iso: eng
license: https://creativecommons.org/licenses/by/4.0/
month: '10'
oa: 1
oa_version: Published Version
pmid: 1
publication: eLife
publication_identifier:
issn:
- 2050-084X
publication_status: published
publisher: eLife Sciences Publications
quality_controlled: '1'
related_material:
record:
- id: '13079'
relation: research_data
status: public
scopus_import: '1'
status: public
title: Selective clearance of the inner nuclear membrane protein emerin by vesicular
transport during ER stress
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 72615eeb-f1f3-11ec-aa25-d4573ddc34fd
volume: 8
year: '2019'
...
---
_id: '13079'
abstract:
- lang: eng
text: The inner nuclear membrane (INM) is a subdomain of the endoplasmic reticulum
(ER) that is gated by the nuclear pore complex. It is unknown whether proteins
of the INM and ER are degraded through shared or distinct pathways in mammalian
cells. We applied dynamic proteomics to profile protein half-lives and report
that INM and ER residents turn over at similar rates, indicating that the INM’s
unique topology is not a barrier to turnover. Using a microscopy approach, we
observed that the proteasome can degrade INM proteins in situ. However, we also
uncovered evidence for selective, vesicular transport-mediated turnover of a single
INM protein, emerin, that is potentiated by ER stress. Emerin is rapidly cleared
from the INM by a mechanism that requires emerin’s LEM domain to mediate vesicular
trafficking to lysosomes. This work demonstrates that the INM can be dynamically
remodeled in response to environmental inputs.
article_processing_charge: No
author:
- first_name: Abigail
full_name: Buchwalter, Abigail
last_name: Buchwalter
- first_name: Roberta
full_name: Schulte, Roberta
last_name: Schulte
- first_name: Hsiao
full_name: Tsai, Hsiao
last_name: Tsai
- first_name: Juliana
full_name: Capitanio, Juliana
last_name: Capitanio
- first_name: Martin W
full_name: HETZER, Martin W
id: 86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed
last_name: HETZER
orcid: 0000-0002-2111-992X
citation:
ama: 'Buchwalter A, Schulte R, Tsai H, Capitanio J, Hetzer M. Data from: Selective
clearance of the inner nuclear membrane protein emerin by vesicular transport
during ER stress. 2019. doi:10.5061/DRYAD.N0R525H'
apa: 'Buchwalter, A., Schulte, R., Tsai, H., Capitanio, J., & Hetzer, M. (2019).
Data from: Selective clearance of the inner nuclear membrane protein emerin by
vesicular transport during ER stress. Dryad. https://doi.org/10.5061/DRYAD.N0R525H'
chicago: 'Buchwalter, Abigail, Roberta Schulte, Hsiao Tsai, Juliana Capitanio, and
Martin Hetzer. “Data from: Selective Clearance of the Inner Nuclear Membrane Protein
Emerin by Vesicular Transport during ER Stress.” Dryad, 2019. https://doi.org/10.5061/DRYAD.N0R525H.'
ieee: 'A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, and M. Hetzer, “Data from:
Selective clearance of the inner nuclear membrane protein emerin by vesicular
transport during ER stress.” Dryad, 2019.'
ista: 'Buchwalter A, Schulte R, Tsai H, Capitanio J, Hetzer M. 2019. Data from:
Selective clearance of the inner nuclear membrane protein emerin by vesicular
transport during ER stress, Dryad, 10.5061/DRYAD.N0R525H.'
mla: 'Buchwalter, Abigail, et al. Data from: Selective Clearance of the Inner
Nuclear Membrane Protein Emerin by Vesicular Transport during ER Stress. Dryad,
2019, doi:10.5061/DRYAD.N0R525H.'
short: A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, M. Hetzer, (2019).
date_created: 2023-05-23T17:09:30Z
date_published: 2019-10-28T00:00:00Z
date_updated: 2023-05-31T06:36:23Z
day: '28'
ddc:
- '570'
doi: 10.5061/DRYAD.N0R525H
extern: '1'
license: https://creativecommons.org/publicdomain/zero/1.0/
main_file_link:
- open_access: '1'
url: https://doi.org/10.5061/dryad.n0r525h
month: '10'
oa: 1
oa_version: Published Version
publisher: Dryad
related_material:
record:
- id: '11060'
relation: used_in_publication
status: public
status: public
title: 'Data from: Selective clearance of the inner nuclear membrane protein emerin
by vesicular transport during ER stress'
tmp:
image: /images/cc_0.png
legal_code_url: https://creativecommons.org/publicdomain/zero/1.0/legalcode
name: Creative Commons Public Domain Dedication (CC0 1.0)
short: CC0 (1.0)
type: research_data_reference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2019'
...
---
_id: '6989'
abstract:
- lang: eng
text: 'When can a polyomino piece of paper be folded into a unit cube? Prior work
studied tree-like polyominoes, but polyominoes with holes remain an intriguing
open problem. We present sufficient conditions for a polyomino with hole(s) to
fold into a cube, and conditions under which cube folding is impossible. In particular,
we show that all but five special simple holes guarantee foldability. '
acknowledgement: This research was performed in part at the 33rd BellairsWinter Workshop on Computational Geometry. Wethank
all other participants for a fruitful atmosphere.
article_processing_charge: No
author:
- first_name: Oswin
full_name: Aichholzer, Oswin
last_name: Aichholzer
- first_name: Hugo A
full_name: Akitaya, Hugo A
last_name: Akitaya
- first_name: Kenneth C
full_name: Cheung, Kenneth C
last_name: Cheung
- first_name: Erik D
full_name: Demaine, Erik D
last_name: Demaine
- first_name: Martin L
full_name: Demaine, Martin L
last_name: Demaine
- first_name: Sandor P
full_name: Fekete, Sandor P
last_name: Fekete
- first_name: Linda
full_name: Kleist, Linda
last_name: Kleist
- first_name: Irina
full_name: Kostitsyna, Irina
last_name: Kostitsyna
- first_name: Maarten
full_name: Löffler, Maarten
last_name: Löffler
- first_name: Zuzana
full_name: Masárová, Zuzana
id: 45CFE238-F248-11E8-B48F-1D18A9856A87
last_name: Masárová
orcid: 0000-0002-6660-1322
- first_name: Klara
full_name: Mundilova, Klara
last_name: Mundilova
- first_name: Christiane
full_name: Schmidt, Christiane
last_name: Schmidt
citation:
ama: 'Aichholzer O, Akitaya HA, Cheung KC, et al. Folding polyominoes with holes
into a cube. In: Proceedings of the 31st Canadian Conference on Computational
Geometry. Canadian Conference on Computational Geometry; 2019:164-170.'
apa: 'Aichholzer, O., Akitaya, H. A., Cheung, K. C., Demaine, E. D., Demaine, M.
L., Fekete, S. P., … Schmidt, C. (2019). Folding polyominoes with holes into a
cube. In Proceedings of the 31st Canadian Conference on Computational Geometry
(pp. 164–170). Edmonton, Canada: Canadian Conference on Computational Geometry.'
chicago: Aichholzer, Oswin, Hugo A Akitaya, Kenneth C Cheung, Erik D Demaine, Martin
L Demaine, Sandor P Fekete, Linda Kleist, et al. “Folding Polyominoes with Holes
into a Cube.” In Proceedings of the 31st Canadian Conference on Computational
Geometry, 164–70. Canadian Conference on Computational Geometry, 2019.
ieee: O. Aichholzer et al., “Folding polyominoes with holes into a cube,”
in Proceedings of the 31st Canadian Conference on Computational Geometry,
Edmonton, Canada, 2019, pp. 164–170.
ista: 'Aichholzer O, Akitaya HA, Cheung KC, Demaine ED, Demaine ML, Fekete SP, Kleist
L, Kostitsyna I, Löffler M, Masárová Z, Mundilova K, Schmidt C. 2019. Folding
polyominoes with holes into a cube. Proceedings of the 31st Canadian Conference
on Computational Geometry. CCCG: Canadian Conference in Computational Geometry,
164–170.'
mla: Aichholzer, Oswin, et al. “Folding Polyominoes with Holes into a Cube.” Proceedings
of the 31st Canadian Conference on Computational Geometry, Canadian Conference
on Computational Geometry, 2019, pp. 164–70.
short: O. Aichholzer, H.A. Akitaya, K.C. Cheung, E.D. Demaine, M.L. Demaine, S.P.
Fekete, L. Kleist, I. Kostitsyna, M. Löffler, Z. Masárová, K. Mundilova, C. Schmidt,
in:, Proceedings of the 31st Canadian Conference on Computational Geometry, Canadian
Conference on Computational Geometry, 2019, pp. 164–170.
conference:
end_date: 2019-08-10
location: Edmonton, Canada
name: 'CCCG: Canadian Conference in Computational Geometry'
start_date: 2019-08-08
date_created: 2019-11-04T16:46:11Z
date_published: 2019-08-01T00:00:00Z
date_updated: 2023-08-04T10:57:42Z
day: '01'
department:
- _id: HeEd
external_id:
arxiv:
- '1910.09917'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://cccg.ca/proceedings/2019/proceedings.pdf
month: '08'
oa: 1
oa_version: Published Version
page: 164-170
publication: Proceedings of the 31st Canadian Conference on Computational Geometry
publication_status: published
publisher: Canadian Conference on Computational Geometry
quality_controlled: '1'
related_material:
record:
- id: '8317'
relation: extended_version
status: public
scopus_import: '1'
status: public
title: Folding polyominoes with holes into a cube
type: conference
user_id: D865714E-FA4E-11E9-B85B-F5C5E5697425
year: '2019'
...
---
_id: '13366'
abstract:
- lang: eng
text: The ability to reversibly assemble nanoparticles using light is both fundamentally
interesting and important for applications ranging from reversible data storage
to controlled drug delivery. Here, the diverse approaches that have so far been
developed to control the self-assembly of nanoparticles using light are reviewed
and compared. These approaches include functionalizing nanoparticles with monolayers
of photoresponsive molecules, placing them in photoresponsive media capable of
reversibly protonating the particles under light, and decorating plasmonic nanoparticles
with thermoresponsive polymers, to name just a few. The applicability of these
methods to larger, micrometer-sized particles is also discussed. Finally, several
perspectives on further developments in the field are offered.
article_number: '1905866'
article_processing_charge: No
article_type: original
author:
- first_name: Tong
full_name: Bian, Tong
last_name: Bian
- first_name: Zonglin
full_name: Chu, Zonglin
last_name: Chu
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Bian T, Chu Z, Klajn R. The many ways to assemble nanoparticles using light.
Advanced Materials. 2019;32(20). doi:10.1002/adma.201905866
apa: Bian, T., Chu, Z., & Klajn, R. (2019). The many ways to assemble nanoparticles
using light. Advanced Materials. Wiley. https://doi.org/10.1002/adma.201905866
chicago: Bian, Tong, Zonglin Chu, and Rafal Klajn. “The Many Ways to Assemble Nanoparticles
Using Light.” Advanced Materials. Wiley, 2019. https://doi.org/10.1002/adma.201905866.
ieee: T. Bian, Z. Chu, and R. Klajn, “The many ways to assemble nanoparticles using
light,” Advanced Materials, vol. 32, no. 20. Wiley, 2019.
ista: Bian T, Chu Z, Klajn R. 2019. The many ways to assemble nanoparticles using
light. Advanced Materials. 32(20), 1905866.
mla: Bian, Tong, et al. “The Many Ways to Assemble Nanoparticles Using Light.” Advanced
Materials, vol. 32, no. 20, 1905866, Wiley, 2019, doi:10.1002/adma.201905866.
short: T. Bian, Z. Chu, R. Klajn, Advanced Materials 32 (2019).
date_created: 2023-08-01T09:37:26Z
date_published: 2019-11-19T00:00:00Z
date_updated: 2023-08-07T10:23:41Z
day: '19'
doi: 10.1002/adma.201905866
extern: '1'
external_id:
pmid:
- '31709655'
intvolume: ' 32'
issue: '20'
keyword:
- Mechanical Engineering
- Mechanics of Materials
- General Materials Science
language:
- iso: eng
month: '11'
oa_version: None
pmid: 1
publication: Advanced Materials
publication_identifier:
eissn:
- 1521-4095
issn:
- 0935-9648
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: The many ways to assemble nanoparticles using light
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 32
year: '2019'
...
---
_id: '13373'
abstract:
- lang: eng
text: The reversible photoisomerization of azobenzene has been utilized to construct
a plethora of systems in which optical, electronic, catalytic, and other properties
can be controlled by light. However, owing to azobenzene’s hydrophobic nature,
most of these examples have been realized only in organic solvents, and systems
operating in water are relatively scarce. Here, we show that by coadsorbing the
inherently hydrophobic azobenzenes with water-solubilizing ligands on the same
nanoparticulate platforms, it is possible to render them essentially water-soluble.
To this end, we developed a modified nanoparticle functionalization procedure
allowing us to precisely fine-tune the amount of azobenzene on the functionalized
nanoparticles. Molecular dynamics simulations helped us to identify two distinct
supramolecular architectures (depending on the length of the background ligand)
on these nanoparticles, which can explain their excellent aqueous solubilities.
Azobenzenes adsorbed on these water-soluble nanoparticles exhibit highly reversible
photoisomerization upon exposure to UV and visible light. Importantly, the mixed-monolayer
approach allowed us to systematically investigate how the background ligand affects
the switching properties of azobenzene. We found that the nature of the background
ligand has a profound effect on the kinetics of azobenzene switching. For example,
a hydroxy-terminated background ligand is capable of accelerating the back-isomerization
reaction by more than 6000-fold. These results pave the way toward the development
of novel light-responsive nanomaterials operating in aqueous media and, in the
long run, in biological environments.
article_processing_charge: No
article_type: original
author:
- first_name: Zonglin
full_name: Chu, Zonglin
last_name: Chu
- first_name: Yanxiao
full_name: Han, Yanxiao
last_name: Han
- first_name: Tong
full_name: Bian, Tong
last_name: Bian
- first_name: Soumen
full_name: De, Soumen
last_name: De
- first_name: Petr
full_name: Král, Petr
last_name: Král
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Chu Z, Han Y, Bian T, De S, Král P, Klajn R. Supramolecular control of azobenzene
switching on nanoparticles. Journal of the American Chemical Society. 2019;141(5):1949-1960.
doi:10.1021/jacs.8b09638
apa: Chu, Z., Han, Y., Bian, T., De, S., Král, P., & Klajn, R. (2019). Supramolecular
control of azobenzene switching on nanoparticles. Journal of the American Chemical
Society. American Chemical Society. https://doi.org/10.1021/jacs.8b09638
chicago: Chu, Zonglin, Yanxiao Han, Tong Bian, Soumen De, Petr Král, and Rafal Klajn.
“Supramolecular Control of Azobenzene Switching on Nanoparticles.” Journal
of the American Chemical Society. American Chemical Society, 2019. https://doi.org/10.1021/jacs.8b09638.
ieee: Z. Chu, Y. Han, T. Bian, S. De, P. Král, and R. Klajn, “Supramolecular control
of azobenzene switching on nanoparticles,” Journal of the American Chemical
Society, vol. 141, no. 5. American Chemical Society, pp. 1949–1960, 2019.
ista: Chu Z, Han Y, Bian T, De S, Král P, Klajn R. 2019. Supramolecular control
of azobenzene switching on nanoparticles. Journal of the American Chemical Society.
141(5), 1949–1960.
mla: Chu, Zonglin, et al. “Supramolecular Control of Azobenzene Switching on Nanoparticles.”
Journal of the American Chemical Society, vol. 141, no. 5, American Chemical
Society, 2019, pp. 1949–60, doi:10.1021/jacs.8b09638.
short: Z. Chu, Y. Han, T. Bian, S. De, P. Král, R. Klajn, Journal of the American
Chemical Society 141 (2019) 1949–1960.
date_created: 2023-08-01T09:39:19Z
date_published: 2019-02-06T00:00:00Z
date_updated: 2023-08-07T10:51:12Z
day: '06'
doi: 10.1021/jacs.8b09638
extern: '1'
external_id:
pmid:
- '30595017'
intvolume: ' 141'
issue: '5'
keyword:
- Colloid and Surface Chemistry
- Biochemistry
- General Chemistry
- Catalysis
language:
- iso: eng
month: '02'
oa_version: Published Version
page: 1949-1960
pmid: 1
publication: Journal of the American Chemical Society
publication_identifier:
eissn:
- 1520-5126
issn:
- 0002-7863
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Supramolecular control of azobenzene switching on nanoparticles
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 141
year: '2019'
...
---
_id: '13372'
abstract:
- lang: eng
text: 'The capacity to respond or adapt to environmental changes is an intrinsic
property of living systems that comprise highly-connected subcomponents communicating
through chemical networks. The development of responsive synthetic systems is
a relatively new research area that covers different disciplines, among which
nanochemistry brings conceptually new demonstrations. Especially attractive are
ligand-protected gold nanoparticles, which have been extensively used over the
last decade as building blocks in constructing superlattices or dynamic aggregates,
under the effect of an applied stimulus. To reflect the importance of surface
chemistry and nanoparticle core composition in the dynamic self-assembly of nanoparticles,
we provide here an overview of various available stimuli, as tools for synthetic
chemists to exploit. Along with this task, the review starts with the use of chemical
stimuli such as solvent, pH, gases, metal ions or biomolecules. It then focuses
on physical stimuli: temperature, magnetic and electric fields, as well as light.
To reflect on the increasing complexity of current architectures, we discuss systems
that are responsive to more than one stimulus, to finally encourage further research
by proposing future challenges.'
article_processing_charge: No
article_type: original
author:
- first_name: Marek
full_name: Grzelczak, Marek
last_name: Grzelczak
- first_name: Luis M.
full_name: Liz-Marzán, Luis M.
last_name: Liz-Marzán
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Grzelczak M, Liz-Marzán LM, Klajn R. Stimuli-responsive self-assembly of nanoparticles.
Chemical Society Reviews. 2019;48(5):1342-1361. doi:10.1039/c8cs00787j
apa: Grzelczak, M., Liz-Marzán, L. M., & Klajn, R. (2019). Stimuli-responsive
self-assembly of nanoparticles. Chemical Society Reviews. Royal Society
of Chemistry. https://doi.org/10.1039/c8cs00787j
chicago: Grzelczak, Marek, Luis M. Liz-Marzán, and Rafal Klajn. “Stimuli-Responsive
Self-Assembly of Nanoparticles.” Chemical Society Reviews. Royal Society
of Chemistry, 2019. https://doi.org/10.1039/c8cs00787j.
ieee: M. Grzelczak, L. M. Liz-Marzán, and R. Klajn, “Stimuli-responsive self-assembly
of nanoparticles,” Chemical Society Reviews, vol. 48, no. 5. Royal Society
of Chemistry, pp. 1342–1361, 2019.
ista: Grzelczak M, Liz-Marzán LM, Klajn R. 2019. Stimuli-responsive self-assembly
of nanoparticles. Chemical Society Reviews. 48(5), 1342–1361.
mla: Grzelczak, Marek, et al. “Stimuli-Responsive Self-Assembly of Nanoparticles.”
Chemical Society Reviews, vol. 48, no. 5, Royal Society of Chemistry, 2019,
pp. 1342–61, doi:10.1039/c8cs00787j.
short: M. Grzelczak, L.M. Liz-Marzán, R. Klajn, Chemical Society Reviews 48 (2019)
1342–1361.
date_created: 2023-08-01T09:38:52Z
date_published: 2019-01-28T00:00:00Z
date_updated: 2023-08-07T10:48:31Z
day: '28'
doi: 10.1039/c8cs00787j
extern: '1'
external_id:
pmid:
- '30688963'
intvolume: ' 48'
issue: '5'
keyword:
- General Chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1039/C8CS00787J
month: '01'
oa: 1
oa_version: Published Version
page: 1342-1361
pmid: 1
publication: Chemical Society Reviews
publication_identifier:
eissn:
- 1460-4744
issn:
- 0306-0012
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Stimuli-responsive self-assembly of nanoparticles
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 48
year: '2019'
...
---
_id: '13369'
abstract:
- lang: eng
text: Arylazopyrazoles represent a new family of molecular photoswitches characterized
by a near-quantitative conversion between two states and long thermal half-lives
of the metastable state. Here, we investigated the behavior of a model arylazopyrazole
in the presence of a self-assembled cage based on Pd–imidazole coordination. Owing
to its high water solubility, the cage can solubilize the E isomer of arylazopyrazole,
which, by itself, is not soluble in water. NMR spectroscopy and X-ray crystallography
have independently demonstrated that each cage can encapsulate two molecules of
E-arylazopyrazole. UV-induced switching to the Z isomer was accompanied by the
release of one of the two guests from the cage and the formation of a 1:1 cage/Z-arylazopyrazole
inclusion complex. DFT calculations suggest that this process involves a dramatic
change in the conformation of the cage. Back-isomerization was induced with green
light and resulted in the initial 1:2 cage/E-arylazopyrazole complex. This back-isomerization
reaction also proceeded in the dark, with a rate significantly higher than in
the absence of the cage.
article_processing_charge: No
article_type: original
author:
- first_name: Anton I
full_name: Hanopolskyi, Anton I
last_name: Hanopolskyi
- first_name: Soumen
full_name: De, Soumen
last_name: De
- first_name: Michał J
full_name: Białek, Michał J
last_name: Białek
- first_name: Yael
full_name: Diskin-Posner, Yael
last_name: Diskin-Posner
- first_name: Liat
full_name: Avram, Liat
last_name: Avram
- first_name: Moran
full_name: Feller, Moran
last_name: Feller
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Hanopolskyi AI, De S, Białek MJ, et al. Reversible switching of arylazopyrazole
within a metal–organic cage. Beilstein Journal of Organic Chemistry. 2019;15:2398-2407.
doi:10.3762/bjoc.15.232
apa: Hanopolskyi, A. I., De, S., Białek, M. J., Diskin-Posner, Y., Avram, L., Feller,
M., & Klajn, R. (2019). Reversible switching of arylazopyrazole within a metal–organic
cage. Beilstein Journal of Organic Chemistry. Beilstein Institut. https://doi.org/10.3762/bjoc.15.232
chicago: Hanopolskyi, Anton I, Soumen De, Michał J Białek, Yael Diskin-Posner, Liat
Avram, Moran Feller, and Rafal Klajn. “Reversible Switching of Arylazopyrazole
within a Metal–Organic Cage.” Beilstein Journal of Organic Chemistry. Beilstein
Institut, 2019. https://doi.org/10.3762/bjoc.15.232.
ieee: A. I. Hanopolskyi et al., “Reversible switching of arylazopyrazole
within a metal–organic cage,” Beilstein Journal of Organic Chemistry, vol.
15. Beilstein Institut, pp. 2398–2407, 2019.
ista: Hanopolskyi AI, De S, Białek MJ, Diskin-Posner Y, Avram L, Feller M, Klajn
R. 2019. Reversible switching of arylazopyrazole within a metal–organic cage.
Beilstein Journal of Organic Chemistry. 15, 2398–2407.
mla: Hanopolskyi, Anton I., et al. “Reversible Switching of Arylazopyrazole within
a Metal–Organic Cage.” Beilstein Journal of Organic Chemistry, vol. 15,
Beilstein Institut, 2019, pp. 2398–407, doi:10.3762/bjoc.15.232.
short: A.I. Hanopolskyi, S. De, M.J. Białek, Y. Diskin-Posner, L. Avram, M. Feller,
R. Klajn, Beilstein Journal of Organic Chemistry 15 (2019) 2398–2407.
date_created: 2023-08-01T09:38:06Z
date_published: 2019-10-10T00:00:00Z
date_updated: 2023-08-07T10:34:56Z
day: '10'
doi: 10.3762/bjoc.15.232
extern: '1'
external_id:
pmid:
- '31666874'
intvolume: ' 15'
keyword:
- Organic Chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.3762/bjoc.15.232
month: '10'
oa: 1
oa_version: Published Version
page: 2398-2407
pmid: 1
publication: Beilstein Journal of Organic Chemistry
publication_identifier:
eissn:
- 1860-5397
publication_status: published
publisher: Beilstein Institut
quality_controlled: '1'
scopus_import: '1'
status: public
title: Reversible switching of arylazopyrazole within a metal–organic cage
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 15
year: '2019'
...
---
_id: '13370'
abstract:
- lang: eng
text: Efficient isomerization of photochromic molecules often requires conformational
freedom and is typically not available under solvent-free conditions. Here, we
report a general methodology allowing for reversible switching of such molecules
on the surfaces of solid materials. Our method is based on dispersing photochromic
compounds within polysilsesquioxane nanowire networks (PNNs), which can be fabricated
as transparent, highly porous, micrometer-thick layers on various substrates.
We found that azobenzene switching within the PNNs proceeded unusually fast compared
with the same molecules in liquid solvents. Efficient isomerization of another
photochromic system, spiropyran, from a colorless to a colored form was used to
create reversible images in PNN-coated glass. The coloration reaction could be
induced with sunlight and is of interest for developing “smart” windows.
article_processing_charge: No
article_type: original
author:
- first_name: Zonglin
full_name: Chu, Zonglin
last_name: Chu
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Chu Z, Klajn R. Polysilsesquioxane nanowire networks as an “Artificial Solvent”
for reversible operation of photochromic molecules. Nano Letters. 2019;19(10):7106-7111.
doi:10.1021/acs.nanolett.9b02642
apa: Chu, Z., & Klajn, R. (2019). Polysilsesquioxane nanowire networks as an
“Artificial Solvent” for reversible operation of photochromic molecules. Nano
Letters. American Chemical Society. https://doi.org/10.1021/acs.nanolett.9b02642
chicago: Chu, Zonglin, and Rafal Klajn. “Polysilsesquioxane Nanowire Networks as
an ‘Artificial Solvent’ for Reversible Operation of Photochromic Molecules.” Nano
Letters. American Chemical Society, 2019. https://doi.org/10.1021/acs.nanolett.9b02642.
ieee: Z. Chu and R. Klajn, “Polysilsesquioxane nanowire networks as an ‘Artificial
Solvent’ for reversible operation of photochromic molecules,” Nano Letters,
vol. 19, no. 10. American Chemical Society, pp. 7106–7111, 2019.
ista: Chu Z, Klajn R. 2019. Polysilsesquioxane nanowire networks as an “Artificial
Solvent” for reversible operation of photochromic molecules. Nano Letters. 19(10),
7106–7111.
mla: Chu, Zonglin, and Rafal Klajn. “Polysilsesquioxane Nanowire Networks as an
‘Artificial Solvent’ for Reversible Operation of Photochromic Molecules.” Nano
Letters, vol. 19, no. 10, American Chemical Society, 2019, pp. 7106–11, doi:10.1021/acs.nanolett.9b02642.
short: Z. Chu, R. Klajn, Nano Letters 19 (2019) 7106–7111.
date_created: 2023-08-01T09:38:23Z
date_published: 2019-09-20T00:00:00Z
date_updated: 2023-08-07T10:39:34Z
day: '20'
doi: 10.1021/acs.nanolett.9b02642
extern: '1'
external_id:
pmid:
- '31539469'
intvolume: ' 19'
issue: '10'
keyword:
- Mechanical Engineering
- Condensed Matter Physics
- General Materials Science
- General Chemistry
- Bioengineering
language:
- iso: eng
month: '09'
oa_version: None
page: 7106-7111
pmid: 1
publication: Nano Letters
publication_identifier:
eissn:
- 1530-6992
issn:
- 1530-6984
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Polysilsesquioxane nanowire networks as an “Artificial Solvent” for reversible
operation of photochromic molecules
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 19
year: '2019'
...
---
_id: '13371'
abstract:
- lang: eng
text: Diamondoid nanoporous crystals represent a synthetically challenging class
of materials that typically have been obtained from tetrahedral building blocks.
In this issue of Chem, Stoddart and coworkers demonstrate that it is possible
to generate diamondoid frameworks from a hexacationic building block lacking a
tetrahedral symmetry. These results highlight the great potential of self-assembly
for rapidly transforming small molecules into structurally complex functional
materials.
article_processing_charge: No
article_type: original
author:
- first_name: Michał J.
full_name: Białek, Michał J.
last_name: Białek
- first_name: Rafal
full_name: Klajn, Rafal
id: 8e84690e-1e48-11ed-a02b-a1e6fb8bb53b
last_name: Klajn
citation:
ama: Białek MJ, Klajn R. Diamond grows up. Chem. 2019;5(9):2283-2285. doi:10.1016/j.chempr.2019.08.012
apa: Białek, M. J., & Klajn, R. (2019). Diamond grows up. Chem. Elsevier.
https://doi.org/10.1016/j.chempr.2019.08.012
chicago: Białek, Michał J., and Rafal Klajn. “Diamond Grows Up.” Chem. Elsevier,
2019. https://doi.org/10.1016/j.chempr.2019.08.012.
ieee: M. J. Białek and R. Klajn, “Diamond grows up,” Chem, vol. 5, no. 9.
Elsevier, pp. 2283–2285, 2019.
ista: Białek MJ, Klajn R. 2019. Diamond grows up. Chem. 5(9), 2283–2285.
mla: Białek, Michał J., and Rafal Klajn. “Diamond Grows Up.” Chem, vol. 5,
no. 9, Elsevier, 2019, pp. 2283–85, doi:10.1016/j.chempr.2019.08.012.
short: M.J. Białek, R. Klajn, Chem 5 (2019) 2283–2285.
date_created: 2023-08-01T09:38:38Z
date_published: 2019-09-12T00:00:00Z
date_updated: 2023-08-07T10:46:50Z
day: '12'
doi: 10.1016/j.chempr.2019.08.012
extern: '1'
intvolume: ' 5'
issue: '9'
keyword:
- Materials Chemistry
- Biochemistry (medical)
- General Chemical Engineering
- Environmental Chemistry
- Biochemistry
- General Chemistry
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1016/j.chempr.2019.08.012
month: '09'
oa: 1
oa_version: Published Version
page: 2283-2285
publication: Chem
publication_identifier:
eissn:
- 2451-9294
issn:
- 2451-9308
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Diamond grows up
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2019'
...
---
_id: '6884'
abstract:
- lang: eng
text: 'In two-player games on graphs, the players move a token through a graph to
produce a finite or infinite path, which determines the qualitative winner or
quantitative payoff of the game. We study bidding games in which the players bid
for the right to move the token. Several bidding rules were studied previously.
In Richman bidding, in each round, the players simultaneously submit bids, and
the higher bidder moves the token and pays the other player. Poorman bidding is
similar except that the winner of the bidding pays the "bank" rather than the
other player. Taxman bidding spans the spectrum between Richman and poorman bidding.
They are parameterized by a constant tau in [0,1]: portion tau of the winning
bid is paid to the other player, and portion 1-tau to the bank. While finite-duration
(reachability) taxman games have been studied before, we present, for the first
time, results on infinite-duration taxman games. It was previously shown that
both Richman and poorman infinite-duration games with qualitative objectives reduce
to reachability games, and we show a similar result here. Our most interesting
results concern quantitative taxman games, namely mean-payoff games, where poorman
and Richman bidding differ significantly. A central quantity in these games is
the ratio between the two players'' initial budgets. While in poorman mean-payoff
games, the optimal payoff of a player depends on the initial ratio, in Richman
bidding, the payoff depends only on the structure of the game. In both games the
optimal payoffs can be found using (different) probabilistic connections with
random-turn games in which in each turn, instead of bidding, a coin is tossed
to determine which player moves. While the value with Richman bidding equals the
value of a random-turn game with an un-biased coin, with poorman bidding, the
bias in the coin is the initial ratio of the budgets. We give a complete classification
of mean-payoff taxman games that is based on a probabilistic connection: the value
of a taxman bidding game with parameter tau and initial ratio r, equals the value
of a random-turn game that uses a coin with bias F(tau, r) = (r+tau * (1-r))/(1+tau).
Thus, we show that Richman bidding is the exception; namely, for every tau <1,
the value of the game depends on the initial ratio. Our proof technique simplifies
and unifies the previous proof techniques for both Richman and poorman bidding. '
alternative_title:
- LIPIcs
article_number: '11'
author:
- first_name: Guy
full_name: Avni, Guy
id: 463C8BC2-F248-11E8-B48F-1D18A9856A87
last_name: Avni
orcid: 0000-0001-5588-8287
- first_name: Thomas A
full_name: Henzinger, Thomas A
id: 40876CD8-F248-11E8-B48F-1D18A9856A87
last_name: Henzinger
orcid: 0000−0002−2985−7724
- first_name: Dorde
full_name: Zikelic, Dorde
id: 294AA7A6-F248-11E8-B48F-1D18A9856A87
last_name: Zikelic
citation:
ama: 'Avni G, Henzinger TA, Zikelic D. Bidding mechanisms in graph games. In: Vol
138. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2019. doi:10.4230/LIPICS.MFCS.2019.11'
apa: 'Avni, G., Henzinger, T. A., & Zikelic, D. (2019). Bidding mechanisms in
graph games (Vol. 138). Presented at the MFCS: nternational Symposium on Mathematical
Foundations of Computer Science, Aachen, Germany: Schloss Dagstuhl - Leibniz-Zentrum
für Informatik. https://doi.org/10.4230/LIPICS.MFCS.2019.11'
chicago: Avni, Guy, Thomas A Henzinger, and Dorde Zikelic. “Bidding Mechanisms in
Graph Games,” Vol. 138. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2019.
https://doi.org/10.4230/LIPICS.MFCS.2019.11.
ieee: 'G. Avni, T. A. Henzinger, and D. Zikelic, “Bidding mechanisms in graph games,”
presented at the MFCS: nternational Symposium on Mathematical Foundations of Computer
Science, Aachen, Germany, 2019, vol. 138.'
ista: 'Avni G, Henzinger TA, Zikelic D. 2019. Bidding mechanisms in graph games.
MFCS: nternational Symposium on Mathematical Foundations of Computer Science,
LIPIcs, vol. 138, 11.'
mla: Avni, Guy, et al. Bidding Mechanisms in Graph Games. Vol. 138, 11, Schloss
Dagstuhl - Leibniz-Zentrum für Informatik, 2019, doi:10.4230/LIPICS.MFCS.2019.11.
short: G. Avni, T.A. Henzinger, D. Zikelic, in:, Schloss Dagstuhl - Leibniz-Zentrum
für Informatik, 2019.
conference:
end_date: 2019-08-30
location: Aachen, Germany
name: 'MFCS: nternational Symposium on Mathematical Foundations of Computer Science'
start_date: 2019-08-26
date_created: 2019-09-18T08:04:26Z
date_published: 2019-08-01T00:00:00Z
date_updated: 2023-08-07T14:08:34Z
day: '01'
ddc:
- '004'
department:
- _id: ToHe
- _id: KrCh
doi: 10.4230/LIPICS.MFCS.2019.11
ec_funded: 1
external_id:
arxiv:
- '1905.03835'
file:
- access_level: open_access
checksum: 6346e116a4f4ed1414174d96d2c4fbd7
content_type: application/pdf
creator: kschuh
date_created: 2019-09-27T11:45:15Z
date_updated: 2020-07-14T12:47:42Z
file_id: '6913'
file_name: 2019_LIPIcs_Avni.pdf
file_size: 554457
relation: main_file
file_date_updated: 2020-07-14T12:47:42Z
has_accepted_license: '1'
intvolume: ' 138'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 2564DBCA-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '665385'
name: International IST Doctoral Program
- _id: 264B3912-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: M02369
name: Formal Methods meets Algorithmic Game Theory
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: Z211
name: The Wittgenstein Prize
- _id: 25F2ACDE-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: S11402-N23
name: Rigorous Systems Engineering
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
quality_controlled: '1'
related_material:
record:
- id: '9239'
relation: later_version
status: public
scopus_import: 1
status: public
title: Bidding mechanisms in graph games
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: conference
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 138
year: '2019'
...
---
_id: '13471'
abstract:
- lang: eng
text: We perform an extensive numerical study of the evolution of massive binary
systems to predict the peculiar velocities that stars obtain when their companion
collapses and disrupts the system. Our aim is to (i) identify which predictions
are robust against model uncertainties and assess their implications, (ii) investigate
which physical processes leave a clear imprint and may therefore be constrained
observationally, and (iii) provide a suite of publicly available model predictions
to allow for the use of kinematic constraints from the Gaia mission. We find that
22+26−8% of all massive binary systems merge prior to the first core-collapse
in the system. Of the remainder, 86+11−9% become unbound because of the core-collapse.
Remarkably, this rarely produces runaway stars (observationally defined as stars
with velocities above 30 km s−1). These are outnumbered by more than an order
of magnitude by slower unbound companions, or “walkaway stars”. This is a robust
outcome of our simulations and is due to the reversal of the mass ratio prior
to the explosion and widening of the orbit, as we show analytically and numerically.
For stars more massive than 15 M⊙, we estimate that 10+5−8% are walkaways and
only 0.5+1.0−0.4% are runaways, nearly all of which have accreted mass from their
companion. Our findings are consistent with earlier studies; however, the low
runaway fraction we find is in tension with observed fractions of about 10%. Thus,
astrometric data on presently single massive stars can potentially constrain the
physics of massive binary evolution. Finally, we show that the high end of the
mass distributions of runaway stars is very sensitive to the assumed black hole
natal kicks, and we propose this as a potentially stringent test for the explosion
mechanism. We also discuss companions remaining bound that can evolve into X-ray
and gravitational wave sources.
article_number: A66
article_processing_charge: No
article_type: original
author:
- first_name: M.
full_name: Renzo, M.
last_name: Renzo
- first_name: E.
full_name: Zapartas, E.
last_name: Zapartas
- first_name: S. E.
full_name: de Mink, S. E.
last_name: de Mink
- first_name: Ylva Louise Linsdotter
full_name: Götberg, Ylva Louise Linsdotter
id: d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d
last_name: Götberg
orcid: 0000-0002-6960-6911
- first_name: S.
full_name: Justham, S.
last_name: Justham
- first_name: R. J.
full_name: Farmer, R. J.
last_name: Farmer
- first_name: R. G.
full_name: Izzard, R. G.
last_name: Izzard
- first_name: S.
full_name: Toonen, S.
last_name: Toonen
- first_name: H.
full_name: Sana, H.
last_name: Sana
citation:
ama: Renzo M, Zapartas E, de Mink SE, et al. Massive runaway and walkaway stars.
Astronomy & Astrophysics. 2019;624. doi:10.1051/0004-6361/201833297
apa: Renzo, M., Zapartas, E., de Mink, S. E., Götberg, Y. L. L., Justham, S., Farmer,
R. J., … Sana, H. (2019). Massive runaway and walkaway stars. Astronomy &
Astrophysics. EDP Sciences. https://doi.org/10.1051/0004-6361/201833297
chicago: Renzo, M., E. Zapartas, S. E. de Mink, Ylva Louise Linsdotter Götberg,
S. Justham, R. J. Farmer, R. G. Izzard, S. Toonen, and H. Sana. “Massive Runaway
and Walkaway Stars.” Astronomy & Astrophysics. EDP Sciences, 2019.
https://doi.org/10.1051/0004-6361/201833297.
ieee: M. Renzo et al., “Massive runaway and walkaway stars,” Astronomy
& Astrophysics, vol. 624. EDP Sciences, 2019.
ista: Renzo M, Zapartas E, de Mink SE, Götberg YLL, Justham S, Farmer RJ, Izzard
RG, Toonen S, Sana H. 2019. Massive runaway and walkaway stars. Astronomy &
Astrophysics. 624, A66.
mla: Renzo, M., et al. “Massive Runaway and Walkaway Stars.” Astronomy &
Astrophysics, vol. 624, A66, EDP Sciences, 2019, doi:10.1051/0004-6361/201833297.
short: M. Renzo, E. Zapartas, S.E. de Mink, Y.L.L. Götberg, S. Justham, R.J. Farmer,
R.G. Izzard, S. Toonen, H. Sana, Astronomy & Astrophysics 624 (2019).
date_created: 2023-08-03T10:14:18Z
date_published: 2019-04-11T00:00:00Z
date_updated: 2023-08-09T12:26:08Z
day: '11'
doi: 10.1051/0004-6361/201833297
extern: '1'
external_id:
arxiv:
- '1804.09164'
intvolume: ' 624'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1051/0004-6361/201833297
month: '04'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
eissn:
- 1432-0746
issn:
- 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Massive runaway and walkaway stars
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 624
year: '2019'
...
---
_id: '13470'
abstract:
- lang: eng
text: "Context. Massive Wolf–Rayet (WR) stars dominate the radiative and mechanical
energy budget of galaxies and probe a critical phase in the evolution of massive
stars prior to core collapse. It is not known whether core He-burning WR stars
(classical WR; cWR) form predominantly through wind stripping (w-WR) or binary
stripping (b-WR). Whereas spectroscopy of WR binaries has so-far largely been
avoided because of its complexity, our study focuses on the 44 WR binaries and
binary candidates of the Large Magellanic Cloud (LMC; metallicity Z ≈ 0.5 Z⊙),
which were identified on the basis of radial velocity variations, composite spectra,
or high X-ray luminosities.\r\n\r\nAims. Relying on a diverse spectroscopic database,
we aim to derive the physical and orbital parameters of our targets, confronting
evolution models of evolved massive stars at subsolar metallicity and constraining
the impact of binary interaction in forming these stars.\r\n\r\nMethods. Spectroscopy
was performed using the Potsdam Wolf–Rayet (PoWR) code and cross-correlation techniques.
Disentanglement was performed using the code Spectangular or the shift-and-add
algorithm. Evolutionary status was interpreted using the Binary Population and
Spectral Synthesis (BPASS) code, exploring binary interaction and chemically homogeneous
evolution.\r\n\r\nResults. Among our sample, 28/44 objects show composite spectra
and are analyzed as such. An additional five targets show periodically moving
WR primaries but no detected companions (SB1); two (BAT99 99 and 112) are potential
WR + compact-object candidates owing to their high X-ray luminosities. We cannot
confirm the binary nature of the remaining 11 candidates. About two-thirds of
the WN components in binaries are identified as cWR, and one-third as hydrogen-burning
WR stars. We establish metallicity-dependent mass-loss recipes, which broadly
agree with those recently derived for single WN stars, and in which so-called
WN3/O3 stars are clear outliers. We estimate that 45 ± 30% of the cWR stars
in our sample have interacted with a companion via mass transfer. However, only
≈12 ± 7% of the cWR stars in our sample naively appear to have formed purely
owing to stripping via a companion (12% b-WR). Assuming that apparently single
WR stars truly formed as single stars, this comprises ≈4% of the whole LMC WN
population, which is about ten times less than expected. No obvious differences
in the properties of single and binary WN stars, whose luminosities extend down
to log L ≈ 5.2 [L⊙], are apparent. With the exception of a few systems (BAT99
19, 49, and 103), the equatorial rotational velocities of the OB-type companions
are moderate (veq ≲ 250 km s−1) and challenge standard formalisms of angular-momentum
accretion. For most objects, chemically homogeneous evolution can be rejected
for the secondary, but not for the WR progenitor.\r\n\r\nConclusions. No obvious
dichotomy in the locations of apparently single and binary WN stars on the Hertzsprung-Russell
diagram is apparent. According to commonly used stellar evolution models (BPASS,
Geneva), most apparently single WN stars could not have formed as single stars,
implying that they were stripped by an undetected companion. Otherwise, it must
follow that pre-WR mass-loss/mixing (e.g., during the red supergiant phase) are
strongly underestimated in standard stellar evolution models."
article_number: A151
article_processing_charge: No
article_type: original
author:
- first_name: T.
full_name: Shenar, T.
last_name: Shenar
- first_name: D. P.
full_name: Sablowski, D. P.
last_name: Sablowski
- first_name: R.
full_name: Hainich, R.
last_name: Hainich
- first_name: H.
full_name: Todt, H.
last_name: Todt
- first_name: A. F. J.
full_name: Moffat, A. F. J.
last_name: Moffat
- first_name: L. M.
full_name: Oskinova, L. M.
last_name: Oskinova
- first_name: V.
full_name: Ramachandran, V.
last_name: Ramachandran
- first_name: H.
full_name: Sana, H.
last_name: Sana
- first_name: A. A. C.
full_name: Sander, A. A. C.
last_name: Sander
- first_name: O.
full_name: Schnurr, O.
last_name: Schnurr
- first_name: N.
full_name: St-Louis, N.
last_name: St-Louis
- first_name: D.
full_name: Vanbeveren, D.
last_name: Vanbeveren
- first_name: Ylva Louise Linsdotter
full_name: Götberg, Ylva Louise Linsdotter
id: d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d
last_name: Götberg
orcid: 0000-0002-6960-6911
- first_name: W.-R.
full_name: Hamann, W.-R.
last_name: Hamann
citation:
ama: Shenar T, Sablowski DP, Hainich R, et al. The Wolf–Rayet binaries of the nitrogen
sequence in the Large Magellanic Cloud. Astronomy & Astrophysics. 2019;627.
doi:10.1051/0004-6361/201935684
apa: Shenar, T., Sablowski, D. P., Hainich, R., Todt, H., Moffat, A. F. J., Oskinova,
L. M., … Hamann, W.-R. (2019). The Wolf–Rayet binaries of the nitrogen sequence
in the Large Magellanic Cloud. Astronomy & Astrophysics. EDP Sciences.
https://doi.org/10.1051/0004-6361/201935684
chicago: Shenar, T., D. P. Sablowski, R. Hainich, H. Todt, A. F. J. Moffat, L. M.
Oskinova, V. Ramachandran, et al. “The Wolf–Rayet Binaries of the Nitrogen Sequence
in the Large Magellanic Cloud.” Astronomy & Astrophysics. EDP Sciences,
2019. https://doi.org/10.1051/0004-6361/201935684.
ieee: T. Shenar et al., “The Wolf–Rayet binaries of the nitrogen sequence
in the Large Magellanic Cloud,” Astronomy & Astrophysics, vol. 627.
EDP Sciences, 2019.
ista: Shenar T, Sablowski DP, Hainich R, Todt H, Moffat AFJ, Oskinova LM, Ramachandran
V, Sana H, Sander AAC, Schnurr O, St-Louis N, Vanbeveren D, Götberg YLL, Hamann
W-R. 2019. The Wolf–Rayet binaries of the nitrogen sequence in the Large Magellanic
Cloud. Astronomy & Astrophysics. 627, A151.
mla: Shenar, T., et al. “The Wolf–Rayet Binaries of the Nitrogen Sequence in the
Large Magellanic Cloud.” Astronomy & Astrophysics, vol. 627, A151,
EDP Sciences, 2019, doi:10.1051/0004-6361/201935684.
short: T. Shenar, D.P. Sablowski, R. Hainich, H. Todt, A.F.J. Moffat, L.M. Oskinova,
V. Ramachandran, H. Sana, A.A.C. Sander, O. Schnurr, N. St-Louis, D. Vanbeveren,
Y.L.L. Götberg, W.-R. Hamann, Astronomy & Astrophysics 627 (2019).
date_created: 2023-08-03T10:14:09Z
date_published: 2019-07-16T00:00:00Z
date_updated: 2023-08-09T12:29:58Z
day: '16'
doi: 10.1051/0004-6361/201935684
extern: '1'
intvolume: ' 627'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1051/0004-6361/201935684
month: '07'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
eissn:
- 1432-0746
issn:
- 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
related_material:
link:
- relation: erratum
url: https://doi.org/10.1051/0004-6361/201935684e
scopus_import: '1'
status: public
title: The Wolf–Rayet binaries of the nitrogen sequence in the Large Magellanic Cloud
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 627
year: '2019'
...
---
_id: '13472'
abstract:
- lang: eng
text: Massive stars in binaries can give rise to extreme phenomena such as X-ray
binaries and gravitational wave sources after one or both stars end their lives
as core-collapse supernovae. Stars in close orbit around a stellar or compact
companion are expected to explode as “stripped-envelope supernovae”, showing no
(Type Ib/c) or little (Type IIb) signs of hydrogen in the spectra, because hydrogen-rich
progenitors are too large to fit. The physical processes responsible for the stripping
process and the fate of the companion are still very poorly understood. Aiming
to find new clues, we investigate Cas A, which is a very young (∼340 yr) and near
(∼3.4 kpc) remnant of a core-collapse supernova. Cas A has been subject to several
searches for possible companions, all unsuccessfully. We present new measurements
of the proper motions and photometry of stars in the vicinity based on deep HST
ACS/WFC and WFC3-IR data. We identify stellar sources that are close enough in
projection but using their proper motions we show that none are compatible with
being at the location of center at the time of explosion, in agreement with earlier
findings. Our photometric measurements allow us to place much deeper (order-of-magnitude)
upper limits on the brightness of possible undetected companions. We systematically
compare them with model predictions for a wide variety of scenarios. We can confidently
rule out the presence of any stellar companion of any reasonable mass and age
(main sequence, pre main sequence or stripped) ruling out what many considered
to be likely evolutionary scenarios for Type IIb supernova (SN IIb). More exotic
scenarios that predict the presence of a compact companion (white dwarf, neutron
star or black hole) are still possible as well as scenarios where the progenitor
of Cas A was single at the moment of explosion (either because it was truly single,
or resulted from a binary that was disrupted, or from a binary merger). The presence
of a compact companion would imply that Cas A is of interest to study exotic outcomes
of binary evolution. The single-at-death solution would still require fine-tuning
of the process that removed most of the envelope through a mass-loss mechanism
yet to be identified. We discuss how future constraints from Gaia and even deeper
photometric studies may help to place further constraints.
article_number: A34
article_processing_charge: No
article_type: original
author:
- first_name: Wolfgang E.
full_name: Kerzendorf, Wolfgang E.
last_name: Kerzendorf
- first_name: Tuan
full_name: Do, Tuan
last_name: Do
- first_name: Selma E.
full_name: de Mink, Selma E.
last_name: de Mink
- first_name: Ylva Louise Linsdotter
full_name: Götberg, Ylva Louise Linsdotter
id: d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d
last_name: Götberg
orcid: 0000-0002-6960-6911
- first_name: Dan
full_name: Milisavljevic, Dan
last_name: Milisavljevic
- first_name: Emmanouil
full_name: Zapartas, Emmanouil
last_name: Zapartas
- first_name: Mathieu
full_name: Renzo, Mathieu
last_name: Renzo
- first_name: Stephen
full_name: Justham, Stephen
last_name: Justham
- first_name: Philipp
full_name: Podsiadlowski, Philipp
last_name: Podsiadlowski
- first_name: Robert A.
full_name: Fesen, Robert A.
last_name: Fesen
citation:
ama: Kerzendorf WE, Do T, de Mink SE, et al. No surviving non-compact stellar companion
to Cassiopeia A. Astronomy & Astrophysics. 2019;623. doi:10.1051/0004-6361/201732206
apa: Kerzendorf, W. E., Do, T., de Mink, S. E., Götberg, Y. L. L., Milisavljevic,
D., Zapartas, E., … Fesen, R. A. (2019). No surviving non-compact stellar companion
to Cassiopeia A. Astronomy & Astrophysics. EDP Sciences. https://doi.org/10.1051/0004-6361/201732206
chicago: Kerzendorf, Wolfgang E., Tuan Do, Selma E. de Mink, Ylva Louise Linsdotter
Götberg, Dan Milisavljevic, Emmanouil Zapartas, Mathieu Renzo, Stephen Justham,
Philipp Podsiadlowski, and Robert A. Fesen. “No Surviving Non-Compact Stellar
Companion to Cassiopeia A.” Astronomy & Astrophysics. EDP Sciences,
2019. https://doi.org/10.1051/0004-6361/201732206.
ieee: W. E. Kerzendorf et al., “No surviving non-compact stellar companion
to Cassiopeia A,” Astronomy & Astrophysics, vol. 623. EDP Sciences,
2019.
ista: Kerzendorf WE, Do T, de Mink SE, Götberg YLL, Milisavljevic D, Zapartas E,
Renzo M, Justham S, Podsiadlowski P, Fesen RA. 2019. No surviving non-compact
stellar companion to Cassiopeia A. Astronomy & Astrophysics. 623, A34.
mla: Kerzendorf, Wolfgang E., et al. “No Surviving Non-Compact Stellar Companion
to Cassiopeia A.” Astronomy & Astrophysics, vol. 623, A34, EDP Sciences,
2019, doi:10.1051/0004-6361/201732206.
short: W.E. Kerzendorf, T. Do, S.E. de Mink, Y.L.L. Götberg, D. Milisavljevic, E.
Zapartas, M. Renzo, S. Justham, P. Podsiadlowski, R.A. Fesen, Astronomy &
Astrophysics 623 (2019).
date_created: 2023-08-03T10:14:27Z
date_published: 2019-03-27T00:00:00Z
date_updated: 2023-08-09T12:28:17Z
day: '27'
doi: 10.1051/0004-6361/201732206
extern: '1'
external_id:
arxiv:
- '1711.00055'
intvolume: ' 623'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1051/0004-6361/201732206
month: '03'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
eissn:
- 1432-0746
issn:
- 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: No surviving non-compact stellar companion to Cassiopeia A
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 623
year: '2019'
...
---
_id: '13468'
abstract:
- lang: eng
text: Hydrogen-rich supernovae, known as Type II (SNe II), are the most common class
of explosions observed following the collapse of the core of massive stars. We
used analytical estimates and population synthesis simulations to assess the fraction
of SNe II progenitors that are expected to have exchanged mass with a companion
prior to explosion. We estimate that 1/3 to 1/2 of SN II progenitors have a history
of mass exchange with a binary companion before exploding. The dominant binary
channels leading to SN II progenitors involve the merger of binary stars. Mergers
are expected to produce a diversity of SN II progenitor characteristics, depending
on the evolutionary timing and properties of the merger. Alternatively, SN II
progenitors from interacting binaries may have accreted mass from their companion,
and subsequently been ejected from the binary system after their companion exploded.
We show that the overall fraction of SN II progenitors that are predicted to have
experienced binary interaction is robust against the main physical uncertainties
in our models. However, the relative importance of different binary evolutionary
channels is affected by changing physical assumptions. We further discuss ways
in which binarity might contribute to the observed diversity of SNe II by considering
potential observational signatures arising from each binary channel. For supernovae
which have a substantial H-rich envelope at explosion (i.e., excluding Type IIb
SNe), a surviving non-compact companion would typically indicate that the supernova
progenitor star was in a wide, non-interacting binary. We argue that a significant
fraction of even Type II-P SNe are expected to have gained mass from a companion
prior to explosion.
article_number: A5
article_processing_charge: No
article_type: original
author:
- first_name: Emmanouil
full_name: Zapartas, Emmanouil
last_name: Zapartas
- first_name: Selma E.
full_name: de Mink, Selma E.
last_name: de Mink
- first_name: Stephen
full_name: Justham, Stephen
last_name: Justham
- first_name: Nathan
full_name: Smith, Nathan
last_name: Smith
- first_name: Alex
full_name: de Koter, Alex
last_name: de Koter
- first_name: Mathieu
full_name: Renzo, Mathieu
last_name: Renzo
- first_name: Iair
full_name: Arcavi, Iair
last_name: Arcavi
- first_name: Rob
full_name: Farmer, Rob
last_name: Farmer
- first_name: Ylva Louise Linsdotter
full_name: Götberg, Ylva Louise Linsdotter
id: d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d
last_name: Götberg
orcid: 0000-0002-6960-6911
- first_name: Silvia
full_name: Toonen, Silvia
last_name: Toonen
citation:
ama: 'Zapartas E, de Mink SE, Justham S, et al. The diverse lives of progenitors
of hydrogen-rich core-collapse supernovae: The role of binary interaction. Astronomy
& Astrophysics. 2019;631. doi:10.1051/0004-6361/201935854'
apa: 'Zapartas, E., de Mink, S. E., Justham, S., Smith, N., de Koter, A., Renzo,
M., … Toonen, S. (2019). The diverse lives of progenitors of hydrogen-rich core-collapse
supernovae: The role of binary interaction. Astronomy & Astrophysics.
EDP Sciences. https://doi.org/10.1051/0004-6361/201935854'
chicago: 'Zapartas, Emmanouil, Selma E. de Mink, Stephen Justham, Nathan Smith,
Alex de Koter, Mathieu Renzo, Iair Arcavi, Rob Farmer, Ylva Louise Linsdotter
Götberg, and Silvia Toonen. “The Diverse Lives of Progenitors of Hydrogen-Rich
Core-Collapse Supernovae: The Role of Binary Interaction.” Astronomy &
Astrophysics. EDP Sciences, 2019. https://doi.org/10.1051/0004-6361/201935854.'
ieee: 'E. Zapartas et al., “The diverse lives of progenitors of hydrogen-rich
core-collapse supernovae: The role of binary interaction,” Astronomy &
Astrophysics, vol. 631. EDP Sciences, 2019.'
ista: 'Zapartas E, de Mink SE, Justham S, Smith N, de Koter A, Renzo M, Arcavi I,
Farmer R, Götberg YLL, Toonen S. 2019. The diverse lives of progenitors of hydrogen-rich
core-collapse supernovae: The role of binary interaction. Astronomy & Astrophysics.
631, A5.'
mla: 'Zapartas, Emmanouil, et al. “The Diverse Lives of Progenitors of Hydrogen-Rich
Core-Collapse Supernovae: The Role of Binary Interaction.” Astronomy &
Astrophysics, vol. 631, A5, EDP Sciences, 2019, doi:10.1051/0004-6361/201935854.'
short: E. Zapartas, S.E. de Mink, S. Justham, N. Smith, A. de Koter, M. Renzo, I.
Arcavi, R. Farmer, Y.L.L. Götberg, S. Toonen, Astronomy & Astrophysics 631
(2019).
date_created: 2023-08-03T10:13:52Z
date_published: 2019-11-20T00:00:00Z
date_updated: 2023-08-09T12:36:09Z
day: '20'
doi: 10.1051/0004-6361/201935854
extern: '1'
external_id:
arxiv:
- '1907.06687'
intvolume: ' 631'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1051/0004-6361/201935854
month: '11'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
eissn:
- 1432-0746
issn:
- 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'The diverse lives of progenitors of hydrogen-rich core-collapse supernovae:
The role of binary interaction'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 631
year: '2019'
...
---
_id: '13469'
abstract:
- lang: eng
text: Stars stripped of their envelopes from interaction with a binary companion
emit a significant fraction of their radiation as ionizing photons. They are potentially
important stellar sources of ionizing radiation, however, they are still often
neglected in spectral synthesis simulations or simulations of stellar feedback.
In anticipating the large datasets of galaxy spectra from the upcoming James Webb
Space Telescope, we modeled the radiative contribution from stripped stars by
using detailed evolutionary and spectral models. We estimated their impact on
the integrated spectra and specifically on the emission rates of H I-, He I-,
and He II-ionizing photons from stellar populations. We find that stripped stars
have the largest impact on the ionizing spectrum of a population in which star
formation halted several Myr ago. In such stellar populations, stripped stars
dominate the emission of ionizing photons, mimicking a younger stellar population
in which massive stars are still present. Our models also suggest that stripped
stars have harder ionizing spectra than massive stars. The additional ionizing
radiation, with which stripped stars contribute affects observable properties
that are related to the emission of ionizing photons from stellar populations.
In co-eval stellar populations, the ionizing radiation from stripped stars increases
the ionization parameter and the production efficiency of hydrogen ionizing photons.
They also cause high values for these parameters for about ten times longer than
what is predicted for massive stars. The effect on properties related to non-ionizing
wavelengths is less pronounced, such as on the ultraviolet continuum slope or
stellar contribution to emission lines. However, the hard ionizing radiation from
stripped stars likely introduces a characteristic ionization structure of the
nebula, which leads to the emission of highly ionized elements such as O2+ and
C3+. We, therefore, expect that the presence of stripped stars affects the location
in the BPT diagram and the diagnostic ratio of O III to O II nebular emission
lines. Our models are publicly available through CDS database and on the STARBURST99
website.
article_number: A134
article_processing_charge: No
article_type: original
author:
- first_name: Ylva Louise Linsdotter
full_name: Götberg, Ylva Louise Linsdotter
id: d0648d0c-0f64-11ee-a2e0-dd0faa2e4f7d
last_name: Götberg
orcid: 0000-0002-6960-6911
- first_name: S. E.
full_name: de Mink, S. E.
last_name: de Mink
- first_name: J. H.
full_name: Groh, J. H.
last_name: Groh
- first_name: C.
full_name: Leitherer, C.
last_name: Leitherer
- first_name: C.
full_name: Norman, C.
last_name: Norman
citation:
ama: Götberg YLL, de Mink SE, Groh JH, Leitherer C, Norman C. The impact of stars
stripped in binaries on the integrated spectra of stellar populations. Astronomy
& Astrophysics. 2019;629. doi:10.1051/0004-6361/201834525
apa: Götberg, Y. L. L., de Mink, S. E., Groh, J. H., Leitherer, C., & Norman,
C. (2019). The impact of stars stripped in binaries on the integrated spectra
of stellar populations. Astronomy & Astrophysics. EDP Sciences. https://doi.org/10.1051/0004-6361/201834525
chicago: Götberg, Ylva Louise Linsdotter, S. E. de Mink, J. H. Groh, C. Leitherer,
and C. Norman. “The Impact of Stars Stripped in Binaries on the Integrated Spectra
of Stellar Populations.” Astronomy & Astrophysics. EDP Sciences, 2019.
https://doi.org/10.1051/0004-6361/201834525.
ieee: Y. L. L. Götberg, S. E. de Mink, J. H. Groh, C. Leitherer, and C. Norman,
“The impact of stars stripped in binaries on the integrated spectra of stellar
populations,” Astronomy & Astrophysics, vol. 629. EDP Sciences, 2019.
ista: Götberg YLL, de Mink SE, Groh JH, Leitherer C, Norman C. 2019. The impact
of stars stripped in binaries on the integrated spectra of stellar populations.
Astronomy & Astrophysics. 629, A134.
mla: Götberg, Ylva Louise Linsdotter, et al. “The Impact of Stars Stripped in Binaries
on the Integrated Spectra of Stellar Populations.” Astronomy & Astrophysics,
vol. 629, A134, EDP Sciences, 2019, doi:10.1051/0004-6361/201834525.
short: Y.L.L. Götberg, S.E. de Mink, J.H. Groh, C. Leitherer, C. Norman, Astronomy
& Astrophysics 629 (2019).
date_created: 2023-08-03T10:14:00Z
date_published: 2019-09-17T00:00:00Z
date_updated: 2023-08-09T12:34:11Z
day: '17'
doi: 10.1051/0004-6361/201834525
extern: '1'
external_id:
arxiv:
- '1908.06102'
intvolume: ' 629'
keyword:
- Space and Planetary Science
- Astronomy and Astrophysics
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1051/0004-6361/201834525
month: '09'
oa: 1
oa_version: Published Version
publication: Astronomy & Astrophysics
publication_identifier:
eissn:
- 1432-0746
issn:
- 0004-6361
publication_status: published
publisher: EDP Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: The impact of stars stripped in binaries on the integrated spectra of stellar
populations
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 629
year: '2019'
...
---
_id: '9726'
abstract:
- lang: eng
text: A detailed description of the two stochastic models, table of parameters,
supplementary data for Figures 4 and 5, parameter dependence of the results, and
an analysis on motors with different force–velocity functions (PDF)
article_processing_charge: No
author:
- first_name: Mehmet C
full_name: Ucar, Mehmet C
id: 50B2A802-6007-11E9-A42B-EB23E6697425
last_name: Ucar
orcid: 0000-0003-0506-4217
- first_name: Reinhard
full_name: Lipowsky, Reinhard
last_name: Lipowsky
citation:
ama: Ucar MC, Lipowsky R. Supplementary information - Collective force generation
by molecular motors is determined by strain-induced unbinding. 2019. doi:10.1021/acs.nanolett.9b04445.s001
apa: Ucar, M. C., & Lipowsky, R. (2019). Supplementary information - Collective
force generation by molecular motors is determined by strain-induced unbinding.
American Chemical Society . https://doi.org/10.1021/acs.nanolett.9b04445.s001
chicago: Ucar, Mehmet C, and Reinhard Lipowsky. “Supplementary Information - Collective
Force Generation by Molecular Motors Is Determined by Strain-Induced Unbinding.”
American Chemical Society , 2019. https://doi.org/10.1021/acs.nanolett.9b04445.s001.
ieee: M. C. Ucar and R. Lipowsky, “Supplementary information - Collective force
generation by molecular motors is determined by strain-induced unbinding.” American
Chemical Society , 2019.
ista: Ucar MC, Lipowsky R. 2019. Supplementary information - Collective force generation
by molecular motors is determined by strain-induced unbinding, American Chemical
Society , 10.1021/acs.nanolett.9b04445.s001.
mla: Ucar, Mehmet C., and Reinhard Lipowsky. Supplementary Information - Collective
Force Generation by Molecular Motors Is Determined by Strain-Induced Unbinding.
American Chemical Society , 2019, doi:10.1021/acs.nanolett.9b04445.s001.
short: M.C. Ucar, R. Lipowsky, (2019).
date_created: 2021-07-27T09:51:46Z
date_published: 2019-12-19T00:00:00Z
date_updated: 2023-08-17T14:07:52Z
day: '19'
department:
- _id: EdHa
doi: 10.1021/acs.nanolett.9b04445.s001
month: '12'
oa_version: Published Version
publisher: 'American Chemical Society '
related_material:
record:
- id: '7166'
relation: used_in_publication
status: public
status: public
title: Supplementary information - Collective force generation by molecular motors
is determined by strain-induced unbinding
type: research_data_reference
user_id: 6785fbc1-c503-11eb-8a32-93094b40e1cf
year: '2019'
...
---
_id: '14001'
abstract:
- lang: eng
text: Chiral molecules interact and react differently with other chiral objects,
depending on their handedness. Therefore, it is essential to understand and ultimately
control the evolution of molecular chirality during chemical reactions. Although
highly sophisticated techniques for the controlled synthesis of chiral molecules
have been developed, the observation of chirality on the natural femtosecond time
scale of a chemical reaction has so far remained out of reach in the gas phase.
Here, we demonstrate a general experimental technique, based on high-harmonic
generation in tailored laser fields, and apply it to probe the time evolution
of molecular chirality during the photodissociation of 2-iodobutane. These measurements
show a change in sign and a pronounced increase in the magnitude of the chiral
response over the first 100 fs, followed by its decay within less than 500 fs,
revealing the photodissociation to achiral products. The observed time evolution
is explained in terms of the variation of the electric and magnetic transition-dipole
moments between the lowest electronic states of the cation as a function of the
reaction coordinate. These results open the path to investigations of the chirality
of molecular-reaction pathways, light-induced chirality in chemical processes,
and the control of molecular chirality through tailored laser pulses.
article_processing_charge: No
article_type: original
author:
- first_name: Denitsa Rangelova
full_name: Baykusheva, Denitsa Rangelova
id: 71b4d059-2a03-11ee-914d-dfa3beed6530
last_name: Baykusheva
- first_name: Daniel
full_name: Zindel, Daniel
last_name: Zindel
- first_name: Vít
full_name: Svoboda, Vít
last_name: Svoboda
- first_name: Elias
full_name: Bommeli, Elias
last_name: Bommeli
- first_name: Manuel
full_name: Ochsner, Manuel
last_name: Ochsner
- first_name: Andres
full_name: Tehlar, Andres
last_name: Tehlar
- first_name: Hans Jakob
full_name: Wörner, Hans Jakob
last_name: Wörner
citation:
ama: Baykusheva DR, Zindel D, Svoboda V, et al. Real-time probing of chirality during
a chemical reaction. Proceedings of the National Academy of Sciences. 2019;116(48):23923-23929.
doi:10.1073/pnas.1907189116
apa: Baykusheva, D. R., Zindel, D., Svoboda, V., Bommeli, E., Ochsner, M., Tehlar,
A., & Wörner, H. J. (2019). Real-time probing of chirality during a chemical
reaction. Proceedings of the National Academy of Sciences. Proceedings
of the National Academy of Sciences. https://doi.org/10.1073/pnas.1907189116
chicago: Baykusheva, Denitsa Rangelova, Daniel Zindel, Vít Svoboda, Elias Bommeli,
Manuel Ochsner, Andres Tehlar, and Hans Jakob Wörner. “Real-Time Probing of Chirality
during a Chemical Reaction.” Proceedings of the National Academy of Sciences.
Proceedings of the National Academy of Sciences, 2019. https://doi.org/10.1073/pnas.1907189116.
ieee: D. R. Baykusheva et al., “Real-time probing of chirality during a chemical
reaction,” Proceedings of the National Academy of Sciences, vol. 116, no.
48. Proceedings of the National Academy of Sciences, pp. 23923–23929, 2019.
ista: Baykusheva DR, Zindel D, Svoboda V, Bommeli E, Ochsner M, Tehlar A, Wörner
HJ. 2019. Real-time probing of chirality during a chemical reaction. Proceedings
of the National Academy of Sciences. 116(48), 23923–23929.
mla: Baykusheva, Denitsa Rangelova, et al. “Real-Time Probing of Chirality during
a Chemical Reaction.” Proceedings of the National Academy of Sciences,
vol. 116, no. 48, Proceedings of the National Academy of Sciences, 2019, pp. 23923–29,
doi:10.1073/pnas.1907189116.
short: D.R. Baykusheva, D. Zindel, V. Svoboda, E. Bommeli, M. Ochsner, A. Tehlar,
H.J. Wörner, Proceedings of the National Academy of Sciences 116 (2019) 23923–23929.
date_created: 2023-08-09T13:10:36Z
date_published: 2019-11-13T00:00:00Z
date_updated: 2023-08-22T07:40:05Z
day: '13'
doi: 10.1073/pnas.1907189116
extern: '1'
external_id:
arxiv:
- '1906.10818'
pmid:
- '31723044'
intvolume: ' 116'
issue: '48'
keyword:
- Multidisciplinary
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1073/pnas.1907189116
month: '11'
oa: 1
oa_version: Published Version
page: 23923-23929
pmid: 1
publication: Proceedings of the National Academy of Sciences
publication_identifier:
eissn:
- 1091-6490
issn:
- 0027-8424
publication_status: published
publisher: Proceedings of the National Academy of Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Real-time probing of chirality during a chemical reaction
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 116
year: '2019'
...
---
_id: '14002'
abstract:
- lang: eng
text: The advancement of attosecond chronoscopy has made it possible to reveal ultrashort
time dynamics of photoionization [1]. Ionization delay measurements in atomic
targets provide a wealth of information about the timing of the photoelectric
effect [2], resonances, electron correlations and transport. The extension of
this approach to molecules, however, presents great challenges. In addition to
the difficulty of identifying correct ionization channels, it is hard to disentangle
the role of the anisotropic molecular landscape from the delays inherent to the
excitation process itself. Here, we present the measurements of ionization delays
from ethyl iodide around the 4d giant dipole resonance of iodine. We employ attosecond
streaking spectroscopy, which enables to disentangle the contribution to the delay
from the functional ethyl group, being responsible for the characteristic chemical
reactivity of the molecule. An attosecond extreme ultraviolet (XUV) pulse ionizes
the molecule around the energy of the giant resonance and the released electron
is exposed to the ponderomotive force of a synchronized near-infrared (NIR) field,
which yields a streaking spectrogram (see figure). Comparative phase analysis
of the spectrograms corresponding to iodine 4d and neon 2p emission permits extracting
overall photoemission delays for ethyl iodide. The data is recorded for multiple
photon energies around the iodine 4d resonance and compared to classical Wigner
propagation [3] and quantum scattering [4] calculations. Here the outgoing electron,
produced via inner shell ionization of the iodine atom in ethyl iodide, and thereby
hardly influenced by the molecular potential during the birth process, acquires
the necessary information about the influence of the functional ethyl group during
its propagation. We find significant delay contributions that can distinguish
between different functional groups, providing a sensitive probe of the local
molecular environment [5]. This would stimulate to perform further angle resolved
measurements in molecules to probe the potential landscape in three dimension.
article_number: '8871819'
article_processing_charge: No
author:
- first_name: Shubhadeep
full_name: Biswas, Shubhadeep
last_name: Biswas
- first_name: I.
full_name: Liontos, I.
last_name: Liontos
- first_name: A. M.
full_name: Kamal, A. M.
last_name: Kamal
- first_name: N. G.
full_name: Kling, N. G.
last_name: Kling
- first_name: A. F.
full_name: Alharbi, A. F.
last_name: Alharbi
- first_name: M.
full_name: Alharbi, M.
last_name: Alharbi
- first_name: A. M.
full_name: Azzeer, A. M.
last_name: Azzeer
- first_name: H. J.
full_name: Worner, H. J.
last_name: Worner
- first_name: A. S.
full_name: Landsman, A. S.
last_name: Landsman
- first_name: M. F.
full_name: Kling, M. F.
last_name: Kling
- first_name: B.
full_name: Forg, B.
last_name: Forg
- first_name: J.
full_name: Schotz, J.
last_name: Schotz
- first_name: W.
full_name: Schweinberger, W.
last_name: Schweinberger
- first_name: L.
full_name: Ortmann, L.
last_name: Ortmann
- first_name: T.
full_name: Zimmermann, T.
last_name: Zimmermann
- first_name: L.-W.
full_name: Pi, L.-W.
last_name: Pi
- first_name: Denitsa Rangelova
full_name: Baykusheva, Denitsa Rangelova
id: 71b4d059-2a03-11ee-914d-dfa3beed6530
last_name: Baykusheva
- first_name: H. A.
full_name: Masood, H. A.
last_name: Masood
citation:
ama: 'Biswas S, Liontos I, Kamal AM, et al. Probing molecular influence on photoemission
delays. In: 2019 Conference on Lasers and Electro-Optics Europe & European
Quantum Electronics Conference. Institute of Electrical and Electronics Engineers;
2019. doi:10.1109/cleoe-eqec.2019.8871819'
apa: 'Biswas, S., Liontos, I., Kamal, A. M., Kling, N. G., Alharbi, A. F., Alharbi,
M., … Masood, H. A. (2019). Probing molecular influence on photoemission delays.
In 2019 Conference on Lasers and Electro-Optics Europe & European Quantum
Electronics Conference. Munich, Germany: Institute of Electrical and Electronics
Engineers. https://doi.org/10.1109/cleoe-eqec.2019.8871819'
chicago: Biswas, Shubhadeep, I. Liontos, A. M. Kamal, N. G. Kling, A. F. Alharbi,
M. Alharbi, A. M. Azzeer, et al. “Probing Molecular Influence on Photoemission
Delays.” In 2019 Conference on Lasers and Electro-Optics Europe & European
Quantum Electronics Conference. Institute of Electrical and Electronics Engineers,
2019. https://doi.org/10.1109/cleoe-eqec.2019.8871819.
ieee: S. Biswas et al., “Probing molecular influence on photoemission delays,”
in 2019 Conference on Lasers and Electro-Optics Europe & European Quantum
Electronics Conference, Munich, Germany, 2019.
ista: 'Biswas S, Liontos I, Kamal AM, Kling NG, Alharbi AF, Alharbi M, Azzeer AM,
Worner HJ, Landsman AS, Kling MF, Forg B, Schotz J, Schweinberger W, Ortmann L,
Zimmermann T, Pi L-W, Baykusheva DR, Masood HA. 2019. Probing molecular influence
on photoemission delays. 2019 Conference on Lasers and Electro-Optics Europe &
European Quantum Electronics Conference. CLEO: European Conference on Lasers and
Electro-Optics, 8871819.'
mla: Biswas, Shubhadeep, et al. “Probing Molecular Influence on Photoemission Delays.”
2019 Conference on Lasers and Electro-Optics Europe & European Quantum
Electronics Conference, 8871819, Institute of Electrical and Electronics Engineers,
2019, doi:10.1109/cleoe-eqec.2019.8871819.
short: S. Biswas, I. Liontos, A.M. Kamal, N.G. Kling, A.F. Alharbi, M. Alharbi,
A.M. Azzeer, H.J. Worner, A.S. Landsman, M.F. Kling, B. Forg, J. Schotz, W. Schweinberger,
L. Ortmann, T. Zimmermann, L.-W. Pi, D.R. Baykusheva, H.A. Masood, in:, 2019 Conference
on Lasers and Electro-Optics Europe & European Quantum Electronics Conference,
Institute of Electrical and Electronics Engineers, 2019.
conference:
end_date: 2019-06-27
location: Munich, Germany
name: 'CLEO: European Conference on Lasers and Electro-Optics'
start_date: 2019-06-23
date_created: 2023-08-09T13:10:49Z
date_published: 2019-10-17T00:00:00Z
date_updated: 2023-08-22T09:32:56Z
day: '17'
doi: 10.1109/cleoe-eqec.2019.8871819
extern: '1'
language:
- iso: eng
month: '10'
oa_version: None
publication: 2019 Conference on Lasers and Electro-Optics Europe & European Quantum
Electronics Conference
publication_identifier:
eisbn:
- '9781728104690'
isbn:
- '9781728104706'
publication_status: published
publisher: Institute of Electrical and Electronics Engineers
quality_controlled: '1'
scopus_import: '1'
status: public
title: Probing molecular influence on photoemission delays
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2019'
...
---
_id: '6671'
abstract:
- lang: eng
text: 'In this paper we discuss three results. The first two concern general sets
of positive reach: we first characterize the reach of a closed set by means of
a bound on the metric distortion between the distance measured in the ambient
Euclidean space and the shortest path distance measured in the set. Secondly,
we prove that the intersection of a ball with radius less than the reach with
the set is geodesically convex, meaning that the shortest path between any two
points in the intersection lies itself in the intersection. For our third result
we focus on manifolds with positive reach and give a bound on the angle between
tangent spaces at two different points in terms of the reach and the distance
between the two points.'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Jean-Daniel
full_name: Boissonnat, Jean-Daniel
last_name: Boissonnat
- first_name: André
full_name: Lieutier, André
last_name: Lieutier
- first_name: Mathijs
full_name: Wintraecken, Mathijs
id: 307CFBC8-F248-11E8-B48F-1D18A9856A87
last_name: Wintraecken
orcid: 0000-0002-7472-2220
citation:
ama: Boissonnat J-D, Lieutier A, Wintraecken M. The reach, metric distortion, geodesic
convexity and the variation of tangent spaces. Journal of Applied and Computational
Topology. 2019;3(1-2):29–58. doi:10.1007/s41468-019-00029-8
apa: Boissonnat, J.-D., Lieutier, A., & Wintraecken, M. (2019). The reach, metric
distortion, geodesic convexity and the variation of tangent spaces. Journal
of Applied and Computational Topology. Springer Nature. https://doi.org/10.1007/s41468-019-00029-8
chicago: Boissonnat, Jean-Daniel, André Lieutier, and Mathijs Wintraecken. “The
Reach, Metric Distortion, Geodesic Convexity and the Variation of Tangent Spaces.”
Journal of Applied and Computational Topology. Springer Nature, 2019. https://doi.org/10.1007/s41468-019-00029-8.
ieee: J.-D. Boissonnat, A. Lieutier, and M. Wintraecken, “The reach, metric distortion,
geodesic convexity and the variation of tangent spaces,” Journal of Applied
and Computational Topology, vol. 3, no. 1–2. Springer Nature, pp. 29–58, 2019.
ista: Boissonnat J-D, Lieutier A, Wintraecken M. 2019. The reach, metric distortion,
geodesic convexity and the variation of tangent spaces. Journal of Applied and
Computational Topology. 3(1–2), 29–58.
mla: Boissonnat, Jean-Daniel, et al. “The Reach, Metric Distortion, Geodesic Convexity
and the Variation of Tangent Spaces.” Journal of Applied and Computational
Topology, vol. 3, no. 1–2, Springer Nature, 2019, pp. 29–58, doi:10.1007/s41468-019-00029-8.
short: J.-D. Boissonnat, A. Lieutier, M. Wintraecken, Journal of Applied and Computational
Topology 3 (2019) 29–58.
date_created: 2019-07-24T08:37:29Z
date_published: 2019-06-01T00:00:00Z
date_updated: 2023-08-22T12:37:47Z
day: '01'
ddc:
- '000'
department:
- _id: HeEd
doi: 10.1007/s41468-019-00029-8
ec_funded: 1
file:
- access_level: open_access
checksum: a5b244db9f751221409cf09c97ee0935
content_type: application/pdf
creator: dernst
date_created: 2019-07-31T08:09:56Z
date_updated: 2020-07-14T12:47:36Z
file_id: '6741'
file_name: 2019_JournAppliedComputTopol_Boissonnat.pdf
file_size: 2215157
relation: main_file
file_date_updated: 2020-07-14T12:47:36Z
has_accepted_license: '1'
intvolume: ' 3'
issue: 1-2
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 29–58
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
name: IST Austria Open Access Fund
publication: Journal of Applied and Computational Topology
publication_identifier:
eissn:
- 2367-1734
issn:
- 2367-1726
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
status: public
title: The reach, metric distortion, geodesic convexity and the variation of tangent
spaces
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 3
year: '2019'
...
---
_id: '301'
abstract:
- lang: eng
text: A representation formula for solutions of stochastic partial differential
equations with Dirichlet boundary conditions is proved. The scope of our setting
is wide enough to cover the general situation when the backward characteristics
that appear in the usual formulation are not even defined in the Itô sense.
article_processing_charge: No
article_type: original
author:
- first_name: Mate
full_name: Gerencser, Mate
id: 44ECEDF2-F248-11E8-B48F-1D18A9856A87
last_name: Gerencser
- first_name: István
full_name: Gyöngy, István
last_name: Gyöngy
citation:
ama: Gerencser M, Gyöngy I. A Feynman–Kac formula for stochastic Dirichlet problems.
Stochastic Processes and their Applications. 2019;129(3):995-1012. doi:10.1016/j.spa.2018.04.003
apa: Gerencser, M., & Gyöngy, I. (2019). A Feynman–Kac formula for stochastic
Dirichlet problems. Stochastic Processes and Their Applications. Elsevier.
https://doi.org/10.1016/j.spa.2018.04.003
chicago: Gerencser, Mate, and István Gyöngy. “A Feynman–Kac Formula for Stochastic
Dirichlet Problems.” Stochastic Processes and Their Applications. Elsevier,
2019. https://doi.org/10.1016/j.spa.2018.04.003.
ieee: M. Gerencser and I. Gyöngy, “A Feynman–Kac formula for stochastic Dirichlet
problems,” Stochastic Processes and their Applications, vol. 129, no. 3.
Elsevier, pp. 995–1012, 2019.
ista: Gerencser M, Gyöngy I. 2019. A Feynman–Kac formula for stochastic Dirichlet
problems. Stochastic Processes and their Applications. 129(3), 995–1012.
mla: Gerencser, Mate, and István Gyöngy. “A Feynman–Kac Formula for Stochastic Dirichlet
Problems.” Stochastic Processes and Their Applications, vol. 129, no. 3,
Elsevier, 2019, pp. 995–1012, doi:10.1016/j.spa.2018.04.003.
short: M. Gerencser, I. Gyöngy, Stochastic Processes and Their Applications 129
(2019) 995–1012.
date_created: 2018-12-11T11:45:42Z
date_published: 2019-03-01T00:00:00Z
date_updated: 2023-08-24T14:20:49Z
day: '01'
department:
- _id: JaMa
doi: 10.1016/j.spa.2018.04.003
external_id:
arxiv:
- '1611.04177'
isi:
- '000458945300012'
intvolume: ' 129'
isi: 1
issue: '3'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1611.04177
month: '03'
oa: 1
oa_version: Preprint
page: 995-1012
publication: Stochastic Processes and their Applications
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: A Feynman–Kac formula for stochastic Dirichlet problems
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 129
year: '2019'
...
---
_id: '80'
abstract:
- lang: eng
text: 'We consider an interacting, dilute Bose gas trapped in a harmonic potential
at a positive temperature. The system is analyzed in a combination of a thermodynamic
and a Gross–Pitaevskii (GP) limit where the trap frequency ω, the temperature
T, and the particle number N are related by N∼ (T/ ω) 3→ ∞ while the scattering
length is so small that the interaction energy per particle around the center
of the trap is of the same order of magnitude as the spectral gap in the trap.
We prove that the difference between the canonical free energy of the interacting
gas and the one of the noninteracting system can be obtained by minimizing the
GP energy functional. We also prove Bose–Einstein condensation in the following
sense: The one-particle density matrix of any approximate minimizer of the canonical
free energy functional is to leading order given by that of the noninteracting
gas but with the free condensate wavefunction replaced by the GP minimizer.'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Andreas
full_name: Deuchert, Andreas
id: 4DA65CD0-F248-11E8-B48F-1D18A9856A87
last_name: Deuchert
orcid: 0000-0003-3146-6746
- first_name: Robert
full_name: Seiringer, Robert
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
- first_name: Jakob
full_name: Yngvason, Jakob
last_name: Yngvason
citation:
ama: Deuchert A, Seiringer R, Yngvason J. Bose–Einstein condensation in a dilute,
trapped gas at positive temperature. Communications in Mathematical Physics.
2019;368(2):723-776. doi:10.1007/s00220-018-3239-0
apa: Deuchert, A., Seiringer, R., & Yngvason, J. (2019). Bose–Einstein condensation
in a dilute, trapped gas at positive temperature. Communications in Mathematical
Physics. Springer. https://doi.org/10.1007/s00220-018-3239-0
chicago: Deuchert, Andreas, Robert Seiringer, and Jakob Yngvason. “Bose–Einstein
Condensation in a Dilute, Trapped Gas at Positive Temperature.” Communications
in Mathematical Physics. Springer, 2019. https://doi.org/10.1007/s00220-018-3239-0.
ieee: A. Deuchert, R. Seiringer, and J. Yngvason, “Bose–Einstein condensation in
a dilute, trapped gas at positive temperature,” Communications in Mathematical
Physics, vol. 368, no. 2. Springer, pp. 723–776, 2019.
ista: Deuchert A, Seiringer R, Yngvason J. 2019. Bose–Einstein condensation in a
dilute, trapped gas at positive temperature. Communications in Mathematical Physics.
368(2), 723–776.
mla: Deuchert, Andreas, et al. “Bose–Einstein Condensation in a Dilute, Trapped
Gas at Positive Temperature.” Communications in Mathematical Physics, vol.
368, no. 2, Springer, 2019, pp. 723–76, doi:10.1007/s00220-018-3239-0.
short: A. Deuchert, R. Seiringer, J. Yngvason, Communications in Mathematical Physics
368 (2019) 723–776.
date_created: 2018-12-11T11:44:31Z
date_published: 2019-06-01T00:00:00Z
date_updated: 2023-08-24T14:27:51Z
day: '01'
ddc:
- '530'
department:
- _id: RoSe
doi: 10.1007/s00220-018-3239-0
ec_funded: 1
external_id:
isi:
- '000467796800007'
file:
- access_level: open_access
checksum: c7e9880b43ac726712c1365e9f2f73a6
content_type: application/pdf
creator: dernst
date_created: 2018-12-17T10:34:06Z
date_updated: 2020-07-14T12:48:07Z
file_id: '5688'
file_name: 2018_CommunMathPhys_Deuchert.pdf
file_size: 893902
relation: main_file
file_date_updated: 2020-07-14T12:48:07Z
has_accepted_license: '1'
intvolume: ' 368'
isi: 1
issue: '2'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 723-776
project:
- _id: 25C6DC12-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '694227'
name: Analysis of quantum many-body systems
- _id: 25C878CE-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: P27533_N27
name: Structure of the Excitation Spectrum for Many-Body Quantum Systems
publication: Communications in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '7974'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Bose–Einstein condensation in a dilute, trapped gas at positive temperature
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 368
year: '2019'
...
---
_id: '5911'
abstract:
- lang: eng
text: Empirical data suggest that inversions in many species contain genes important
for intraspecific divergence and speciation, yet mechanisms of evolution remain
unclear. While genes inside an inversion are tightly linked, inversions are not
static but evolve separately from the rest of the genome by new mutations, recombination
within arrangements, and gene flux between arrangements. Inversion polymorphisms
are maintained by different processes, for example, divergent or balancing selection,
or a mix of multiple processes. Moreover, the relative roles of selection, drift,
mutation, and recombination will change over the lifetime of an inversion and
within its area of distribution. We believe inversions are central to the evolution
of many species, but we need many more data and new models to understand the complex
mechanisms involved.
article_processing_charge: No
article_type: original
author:
- first_name: Rui
full_name: Faria, Rui
last_name: Faria
- first_name: Kerstin
full_name: Johannesson, Kerstin
last_name: Johannesson
- first_name: Roger K.
full_name: Butlin, Roger K.
last_name: Butlin
- first_name: Anja M
full_name: Westram, Anja M
id: 3C147470-F248-11E8-B48F-1D18A9856A87
last_name: Westram
orcid: 0000-0003-1050-4969
citation:
ama: Faria R, Johannesson K, Butlin RK, Westram AM. Evolving inversions. Trends
in Ecology and Evolution. 2019;34(3):239-248. doi:10.1016/j.tree.2018.12.005
apa: Faria, R., Johannesson, K., Butlin, R. K., & Westram, A. M. (2019). Evolving
inversions. Trends in Ecology and Evolution. Elsevier. https://doi.org/10.1016/j.tree.2018.12.005
chicago: Faria, Rui, Kerstin Johannesson, Roger K. Butlin, and Anja M Westram. “Evolving
Inversions.” Trends in Ecology and Evolution. Elsevier, 2019. https://doi.org/10.1016/j.tree.2018.12.005.
ieee: R. Faria, K. Johannesson, R. K. Butlin, and A. M. Westram, “Evolving inversions,”
Trends in Ecology and Evolution, vol. 34, no. 3. Elsevier, pp. 239–248,
2019.
ista: Faria R, Johannesson K, Butlin RK, Westram AM. 2019. Evolving inversions.
Trends in Ecology and Evolution. 34(3), 239–248.
mla: Faria, Rui, et al. “Evolving Inversions.” Trends in Ecology and Evolution,
vol. 34, no. 3, Elsevier, 2019, pp. 239–48, doi:10.1016/j.tree.2018.12.005.
short: R. Faria, K. Johannesson, R.K. Butlin, A.M. Westram, Trends in Ecology and
Evolution 34 (2019) 239–248.
date_created: 2019-02-03T22:59:15Z
date_published: 2019-03-01T00:00:00Z
date_updated: 2023-08-24T14:29:48Z
day: '01'
ddc:
- '570'
department:
- _id: NiBa
doi: 10.1016/j.tree.2018.12.005
ec_funded: 1
external_id:
isi:
- '000459899000013'
file:
- access_level: open_access
checksum: ef24572d6ebcc1452c067e05410cc4a2
content_type: application/pdf
creator: cziletti
date_created: 2020-01-09T10:55:58Z
date_updated: 2020-07-14T12:47:13Z
file_id: '7245'
file_name: 2019_Trends_Evolution_Faria.pdf
file_size: 1946795
relation: main_file
file_date_updated: 2020-07-14T12:47:13Z
has_accepted_license: '1'
intvolume: ' 34'
isi: 1
issue: '3'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
month: '03'
oa: 1
oa_version: Published Version
page: 239-248
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
publication: Trends in Ecology and Evolution
publication_identifier:
issn:
- '01695347'
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Evolving inversions
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
(CC BY-NC-ND 4.0)
short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 34
year: '2019'
...
---
_id: '439'
abstract:
- lang: eng
text: "We count points over a finite field on wild character varieties,of Riemann
surfaces for singularities with regular semisimple leading term. The new feature
in our counting formulas is the appearance of characters of Yokonuma–Hecke algebras.
Our result leads to the conjecture that the mixed Hodge polynomials of these character
varieties agree with previously conjectured perverse Hodge polynomials of certain
twisted parabolic Higgs moduli spaces, indicating the\r\npossibility of a P =
W conjecture for a suitable wild Hitchin system."
article_processing_charge: No
article_type: original
author:
- first_name: Tamas
full_name: Hausel, Tamas
id: 4A0666D8-F248-11E8-B48F-1D18A9856A87
last_name: Hausel
- first_name: Martin
full_name: Mereb, Martin
id: 43D735EE-F248-11E8-B48F-1D18A9856A87
last_name: Mereb
- first_name: Michael
full_name: Wong, Michael
last_name: Wong
citation:
ama: Hausel T, Mereb M, Wong M. Arithmetic and representation theory of wild character
varieties. Journal of the European Mathematical Society. 2019;21(10):2995-3052.
doi:10.4171/JEMS/896
apa: Hausel, T., Mereb, M., & Wong, M. (2019). Arithmetic and representation
theory of wild character varieties. Journal of the European Mathematical Society.
European Mathematical Society. https://doi.org/10.4171/JEMS/896
chicago: Hausel, Tamás, Martin Mereb, and Michael Wong. “Arithmetic and Representation
Theory of Wild Character Varieties.” Journal of the European Mathematical Society.
European Mathematical Society, 2019. https://doi.org/10.4171/JEMS/896.
ieee: T. Hausel, M. Mereb, and M. Wong, “Arithmetic and representation theory of
wild character varieties,” Journal of the European Mathematical Society,
vol. 21, no. 10. European Mathematical Society, pp. 2995–3052, 2019.
ista: Hausel T, Mereb M, Wong M. 2019. Arithmetic and representation theory of wild
character varieties. Journal of the European Mathematical Society. 21(10), 2995–3052.
mla: Hausel, Tamás, et al. “Arithmetic and Representation Theory of Wild Character
Varieties.” Journal of the European Mathematical Society, vol. 21, no.
10, European Mathematical Society, 2019, pp. 2995–3052, doi:10.4171/JEMS/896.
short: T. Hausel, M. Mereb, M. Wong, Journal of the European Mathematical Society
21 (2019) 2995–3052.
date_created: 2018-12-11T11:46:29Z
date_published: 2019-10-01T00:00:00Z
date_updated: 2023-08-24T14:24:49Z
day: '01'
department:
- _id: TaHa
doi: 10.4171/JEMS/896
ec_funded: 1
external_id:
arxiv:
- '1604.03382'
isi:
- '000480413600002'
intvolume: ' 21'
isi: 1
issue: '10'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1604.03382
month: '10'
oa: 1
oa_version: Preprint
page: 2995-3052
project:
- _id: 25E549F4-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '320593'
name: Arithmetic and physics of Higgs moduli spaces
publication: Journal of the European Mathematical Society
publication_identifier:
eissn:
- 1435-9855
publication_status: published
publisher: European Mathematical Society
publist_id: '7384'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Arithmetic and representation theory of wild character varieties
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 21
year: '2019'
...
---
_id: '105'
abstract:
- lang: eng
text: 'Clinical Utility Gene Card. 1. Name of Disease (Synonyms): Pontocerebellar
hypoplasia type 9 (PCH9) and spastic paraplegia-63 (SPG63). 2. OMIM# of the Disease:
615809 and 615686. 3. Name of the Analysed Genes or DNA/Chromosome Segments: AMPD2
at 1p13.3. 4. OMIM# of the Gene(s): 102771.'
acknowledgement: 'This work was supported by EuroGentest2 (Unit 2: “Genetic testing
as part of health care”), a Coordination Action under FP7 (Grant Agreement Number
261469) and the European Society of Human Genetics. We acknowledge the participation
of the patients and their families in these studies, as well as the generous financial
support of the Lefroy and Handbury families. APLM was supported by an Australian
Postgraduate Award. PJL is supported by an NHMRC Career Development Fellowship (GNT1032364).
RJL is supported by a Melbourne Children’s Clinician Scientist Fellowship.'
article_processing_charge: No
article_type: original
author:
- first_name: Ashley
full_name: Marsh, Ashley
last_name: Marsh
- first_name: Gaia
full_name: Novarino, Gaia
id: 3E57A680-F248-11E8-B48F-1D18A9856A87
last_name: Novarino
orcid: 0000-0002-7673-7178
- first_name: Paul
full_name: Lockhart, Paul
last_name: Lockhart
- first_name: Richard
full_name: Leventer, Richard
last_name: Leventer
citation:
ama: Marsh A, Novarino G, Lockhart P, Leventer R. CUGC for pontocerebellar hypoplasia
type 9 and spastic paraplegia-63. European Journal of Human Genetics. 2019;27:161-166.
doi:10.1038/s41431-018-0231-2
apa: Marsh, A., Novarino, G., Lockhart, P., & Leventer, R. (2019). CUGC for
pontocerebellar hypoplasia type 9 and spastic paraplegia-63. European Journal
of Human Genetics. Springer Nature. https://doi.org/10.1038/s41431-018-0231-2
chicago: Marsh, Ashley, Gaia Novarino, Paul Lockhart, and Richard Leventer. “CUGC
for Pontocerebellar Hypoplasia Type 9 and Spastic Paraplegia-63.” European
Journal of Human Genetics. Springer Nature, 2019. https://doi.org/10.1038/s41431-018-0231-2.
ieee: A. Marsh, G. Novarino, P. Lockhart, and R. Leventer, “CUGC for pontocerebellar
hypoplasia type 9 and spastic paraplegia-63,” European Journal of Human Genetics,
vol. 27. Springer Nature, pp. 161–166, 2019.
ista: Marsh A, Novarino G, Lockhart P, Leventer R. 2019. CUGC for pontocerebellar
hypoplasia type 9 and spastic paraplegia-63. European Journal of Human Genetics.
27, 161–166.
mla: Marsh, Ashley, et al. “CUGC for Pontocerebellar Hypoplasia Type 9 and Spastic
Paraplegia-63.” European Journal of Human Genetics, vol. 27, Springer Nature,
2019, pp. 161–66, doi:10.1038/s41431-018-0231-2.
short: A. Marsh, G. Novarino, P. Lockhart, R. Leventer, European Journal of Human
Genetics 27 (2019) 161–166.
date_created: 2018-12-11T11:44:39Z
date_published: 2019-01-01T00:00:00Z
date_updated: 2023-08-24T14:28:24Z
day: '01'
department:
- _id: GaNo
doi: 10.1038/s41431-018-0231-2
external_id:
isi:
- '000454111500019'
pmid:
- '30089829'
intvolume: ' 27'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1038/s41431-018-0231-2
month: '01'
oa: 1
oa_version: Published Version
page: 161-166
pmid: 1
publication: European Journal of Human Genetics
publication_status: published
publisher: Springer Nature
publist_id: '7949'
quality_controlled: '1'
scopus_import: '1'
status: public
title: CUGC for pontocerebellar hypoplasia type 9 and spastic paraplegia-63
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 27
year: '2019'
...
---
_id: '65'
abstract:
- lang: eng
text: We provide an entropy formulation for porous medium-type equations with a
stochastic, non-linear, spatially inhomogeneous forcing. Well-posedness and L1-contraction
is obtained in the class of entropy solutions. Our scope allows for porous medium
operators Δ(|u|m−1u) for all m∈(1,∞), and Hölder continuous diffusion nonlinearity
with exponent 1/2.
article_processing_charge: No
article_type: original
author:
- first_name: Konstantinos
full_name: Dareiotis, Konstantinos
last_name: Dareiotis
- first_name: Mate
full_name: Gerencser, Mate
id: 44ECEDF2-F248-11E8-B48F-1D18A9856A87
last_name: Gerencser
- first_name: Benjamin
full_name: Gess, Benjamin
last_name: Gess
citation:
ama: Dareiotis K, Gerencser M, Gess B. Entropy solutions for stochastic porous media
equations. Journal of Differential Equations. 2019;266(6):3732-3763. doi:10.1016/j.jde.2018.09.012
apa: Dareiotis, K., Gerencser, M., & Gess, B. (2019). Entropy solutions for
stochastic porous media equations. Journal of Differential Equations. Elsevier.
https://doi.org/10.1016/j.jde.2018.09.012
chicago: Dareiotis, Konstantinos, Mate Gerencser, and Benjamin Gess. “Entropy Solutions
for Stochastic Porous Media Equations.” Journal of Differential Equations.
Elsevier, 2019. https://doi.org/10.1016/j.jde.2018.09.012.
ieee: K. Dareiotis, M. Gerencser, and B. Gess, “Entropy solutions for stochastic
porous media equations,” Journal of Differential Equations, vol. 266, no.
6. Elsevier, pp. 3732–3763, 2019.
ista: Dareiotis K, Gerencser M, Gess B. 2019. Entropy solutions for stochastic porous
media equations. Journal of Differential Equations. 266(6), 3732–3763.
mla: Dareiotis, Konstantinos, et al. “Entropy Solutions for Stochastic Porous Media
Equations.” Journal of Differential Equations, vol. 266, no. 6, Elsevier,
2019, pp. 3732–63, doi:10.1016/j.jde.2018.09.012.
short: K. Dareiotis, M. Gerencser, B. Gess, Journal of Differential Equations 266
(2019) 3732–3763.
date_created: 2018-12-11T11:44:26Z
date_published: 2019-03-05T00:00:00Z
date_updated: 2023-08-24T14:30:16Z
day: '5'
department:
- _id: JaMa
doi: 10.1016/j.jde.2018.09.012
external_id:
arxiv:
- '1803.06953'
isi:
- '000456332500026'
intvolume: ' 266'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1803.06953
month: '03'
oa: 1
oa_version: Preprint
page: 3732-3763
publication: Journal of Differential Equations
publication_status: published
publisher: Elsevier
publist_id: '7989'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Entropy solutions for stochastic porous media equations
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 266
year: '2019'
...
---
_id: '5907'
abstract:
- lang: eng
text: Microalgae of the genus Chlorella vulgaris are candidates for the production
of lipids for biofuel production. Besides that, Chlorella vulgaris is marketed
as protein and vitamin rich food additive. Its potential as a novel expression
system for recombinant proteins inspired us to study its asparagine-linked oligosaccharides
(N-glycans) by mass spectrometry, chromatography and gas chromatography. Oligomannosidic
N-glycans with up to nine mannoses were the structures found in culture collection
strains as well as several commercial products. These glycans co-eluted with plant
N-glycans in the highly shape selective porous graphitic carbon chromatography.
Thus, Chlorella vulgaris generates oligomannosidic N-glycans of the structural
type known from land plants and animals. In fact, Man5 (Man5GlcNAc2) served as
substrate for GlcNAc-transferase I and a trace of an endogenous structure with
terminal GlcNAc was seen. The unusual more linear Man5 structure recently found
on glycoproteins of Chlamydomonas reinhardtii occurred - if at all - in traces
only. Notably, a majority of the oligomannosidic glycans was multiply O-methylated
with 3-O-methyl and 3,6-di-O-methyl mannoses at the non-reducing termini. This
modification has so far been neither found on plant nor vertebrate N-glycans.
It’s possible immunogenicity raises concerns as to the use of C. vulgaris for
production of pharmaceutical glycoproteins.
article_number: '331'
article_processing_charge: No
author:
- first_name: Réka
full_name: Mócsai, Réka
last_name: Mócsai
- first_name: Rudolf
full_name: Figl, Rudolf
last_name: Figl
- first_name: Clemens
full_name: Troschl, Clemens
last_name: Troschl
- first_name: Richard
full_name: Strasser, Richard
last_name: Strasser
- first_name: Elisabeth
full_name: Svehla, Elisabeth
last_name: Svehla
- first_name: Markus
full_name: Windwarder, Markus
last_name: Windwarder
- first_name: Andreas
full_name: Thader, Andreas
id: 3A18A7B8-F248-11E8-B48F-1D18A9856A87
last_name: Thader
- first_name: Friedrich
full_name: Altmann, Friedrich
last_name: Altmann
citation:
ama: Mócsai R, Figl R, Troschl C, et al. N-glycans of the microalga Chlorella vulgaris
are of the oligomannosidic type but highly methylated. Scientific Reports.
2019;9(1). doi:10.1038/s41598-018-36884-1
apa: Mócsai, R., Figl, R., Troschl, C., Strasser, R., Svehla, E., Windwarder, M.,
… Altmann, F. (2019). N-glycans of the microalga Chlorella vulgaris are of the
oligomannosidic type but highly methylated. Scientific Reports. Nature
Publishing Group. https://doi.org/10.1038/s41598-018-36884-1
chicago: Mócsai, Réka, Rudolf Figl, Clemens Troschl, Richard Strasser, Elisabeth
Svehla, Markus Windwarder, Andreas Thader, and Friedrich Altmann. “N-Glycans of
the Microalga Chlorella Vulgaris Are of the Oligomannosidic Type but Highly Methylated.”
Scientific Reports. Nature Publishing Group, 2019. https://doi.org/10.1038/s41598-018-36884-1.
ieee: R. Mócsai et al., “N-glycans of the microalga Chlorella vulgaris are
of the oligomannosidic type but highly methylated,” Scientific Reports,
vol. 9, no. 1. Nature Publishing Group, 2019.
ista: Mócsai R, Figl R, Troschl C, Strasser R, Svehla E, Windwarder M, Thader A,
Altmann F. 2019. N-glycans of the microalga Chlorella vulgaris are of the oligomannosidic
type but highly methylated. Scientific Reports. 9(1), 331.
mla: Mócsai, Réka, et al. “N-Glycans of the Microalga Chlorella Vulgaris Are of
the Oligomannosidic Type but Highly Methylated.” Scientific Reports, vol.
9, no. 1, 331, Nature Publishing Group, 2019, doi:10.1038/s41598-018-36884-1.
short: R. Mócsai, R. Figl, C. Troschl, R. Strasser, E. Svehla, M. Windwarder, A.
Thader, F. Altmann, Scientific Reports 9 (2019).
date_created: 2019-02-03T22:59:13Z
date_published: 2019-01-23T00:00:00Z
date_updated: 2023-08-24T14:33:16Z
day: '23'
ddc:
- '580'
department:
- _id: FlSc
doi: 10.1038/s41598-018-36884-1
external_id:
isi:
- '000456392400012'
file:
- access_level: open_access
checksum: 4129c7d7663d1f8a1edf8c4232372f66
content_type: application/pdf
creator: dernst
date_created: 2019-02-05T13:10:02Z
date_updated: 2020-07-14T12:47:13Z
file_id: '5923'
file_name: 2019_ScientificReports_Mocsai.pdf
file_size: 2124292
relation: main_file
file_date_updated: 2020-07-14T12:47:13Z
has_accepted_license: '1'
intvolume: ' 9'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Scientific Reports
publication_status: published
publisher: Nature Publishing Group
quality_controlled: '1'
scopus_import: '1'
status: public
title: N-glycans of the microalga Chlorella vulgaris are of the oligomannosidic type
but highly methylated
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 9
year: '2019'
...
---
_id: '5908'
abstract:
- lang: eng
text: The interorganelle communication mediated by membrane contact sites (MCSs)
is an evolutionary hallmark of eukaryotic cells. MCS connections enable the nonvesicular
exchange of information between organelles and allow them to coordinate responses
to changing cellular environments. In plants, the importance of MCS components
in the responses to environmental stress has been widely established, but the
molecular mechanisms regulating interorganelle connectivity during stress still
remain opaque. In this report, we use the model plant Arabidopsis thaliana to
show that ionic stress increases endoplasmic reticulum (ER)–plasma membrane (PM)
connectivity by promoting the cortical expansion of synaptotagmin 1 (SYT1)-enriched
ER–PM contact sites (S-EPCSs). We define differential roles for the cortical cytoskeleton
in the regulation of S-EPCS dynamics and ER–PM connectivity, and we identify the
accumulation of phosphatidylinositol 4,5-bisphosphate [PI(4,5)P2] at the PM as
a molecular signal associated with the ER–PM connectivity changes. Our study highlights
the functional conservation of EPCS components and PM phosphoinositides as modulators
of ER–PM connectivity in eukaryotes, and uncovers unique aspects of the spatiotemporal
regulation of ER–PM connectivity in plants.
article_processing_charge: No
article_type: original
author:
- first_name: Eunkyoung
full_name: Lee, Eunkyoung
last_name: Lee
- first_name: Steffen
full_name: Vanneste, Steffen
last_name: Vanneste
- first_name: Jessica
full_name: Pérez-Sancho, Jessica
last_name: Pérez-Sancho
- first_name: Francisco
full_name: Benitez-Fuente, Francisco
last_name: Benitez-Fuente
- first_name: Matthew
full_name: Strelau, Matthew
last_name: Strelau
- first_name: Alberto P.
full_name: Macho, Alberto P.
last_name: Macho
- first_name: Miguel A.
full_name: Botella, Miguel A.
last_name: Botella
- first_name: Jiří
full_name: Friml, Jiří
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
- first_name: Abel
full_name: Rosado, Abel
last_name: Rosado
citation:
ama: Lee E, Vanneste S, Pérez-Sancho J, et al. Ionic stress enhances ER–PM connectivity
via phosphoinositide-associated SYT1 contact site expansion in Arabidopsis. Proceedings
of the National Academy of Sciences of the United States of America. 2019;116(4):1420-1429.
doi:10.1073/pnas.1818099116
apa: Lee, E., Vanneste, S., Pérez-Sancho, J., Benitez-Fuente, F., Strelau, M., Macho,
A. P., … Rosado, A. (2019). Ionic stress enhances ER–PM connectivity via phosphoinositide-associated
SYT1 contact site expansion in Arabidopsis. Proceedings of the National Academy
of Sciences of the United States of America. National Academy of Sciences.
https://doi.org/10.1073/pnas.1818099116
chicago: Lee, Eunkyoung, Steffen Vanneste, Jessica Pérez-Sancho, Francisco Benitez-Fuente,
Matthew Strelau, Alberto P. Macho, Miguel A. Botella, Jiří Friml, and Abel Rosado.
“Ionic Stress Enhances ER–PM Connectivity via Phosphoinositide-Associated SYT1
Contact Site Expansion in Arabidopsis.” Proceedings of the National Academy
of Sciences of the United States of America. National Academy of Sciences,
2019. https://doi.org/10.1073/pnas.1818099116.
ieee: E. Lee et al., “Ionic stress enhances ER–PM connectivity via phosphoinositide-associated
SYT1 contact site expansion in Arabidopsis,” Proceedings of the National Academy
of Sciences of the United States of America, vol. 116, no. 4. National Academy
of Sciences, pp. 1420–1429, 2019.
ista: Lee E, Vanneste S, Pérez-Sancho J, Benitez-Fuente F, Strelau M, Macho AP,
Botella MA, Friml J, Rosado A. 2019. Ionic stress enhances ER–PM connectivity
via phosphoinositide-associated SYT1 contact site expansion in Arabidopsis. Proceedings
of the National Academy of Sciences of the United States of America. 116(4), 1420–1429.
mla: Lee, Eunkyoung, et al. “Ionic Stress Enhances ER–PM Connectivity via Phosphoinositide-Associated
SYT1 Contact Site Expansion in Arabidopsis.” Proceedings of the National Academy
of Sciences of the United States of America, vol. 116, no. 4, National Academy
of Sciences, 2019, pp. 1420–29, doi:10.1073/pnas.1818099116.
short: E. Lee, S. Vanneste, J. Pérez-Sancho, F. Benitez-Fuente, M. Strelau, A.P.
Macho, M.A. Botella, J. Friml, A. Rosado, Proceedings of the National Academy
of Sciences of the United States of America 116 (2019) 1420–1429.
date_created: 2019-02-03T22:59:14Z
date_published: 2019-01-22T00:00:00Z
date_updated: 2023-08-24T14:31:09Z
day: '22'
department:
- _id: JiFr
doi: 10.1073/pnas.1818099116
external_id:
isi:
- '000456336100050'
pmid:
- '30610176'
intvolume: ' 116'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1073/pnas.1818099116
month: '01'
oa: 1
oa_version: Published Version
page: 1420-1429
pmid: 1
publication: Proceedings of the National Academy of Sciences of the United States
of America
publication_status: published
publisher: National Academy of Sciences
quality_controlled: '1'
scopus_import: '1'
status: public
title: Ionic stress enhances ER–PM connectivity via phosphoinositide-associated SYT1
contact site expansion in Arabidopsis
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 116
year: '2019'
...
---
_id: '5680'
abstract:
- lang: eng
text: Pollinators display a remarkable diversity of foraging strategies with flowering
plants, from primarily mutualistic interactions to cheating through nectar robbery.
Despite numerous studies on the effect of nectar robbing on components of plant
fitness, its contribution to reproductive isolation is unclear. We experimentally
tested the impact of different pollinator strategies in a natural hybrid zone
between two subspecies of Antirrhinum majus with alternate flower colour guides.
On either side of a steep cline in flower colour between Antirrhinum majus pseudomajus
(magenta) and A. m. striatum (yellow), we quantified the behaviour of all floral
visitors at different time points during the flowering season. Using long-run
camera surveys, we quantify the impact of nectar robbing on the number of flowers
visited per inflorescence and the flower probing time. We further experimentally
tested the effect of nectar robbing on female reproductive success by manipulating
the intensity of robbing. While robbing increased over time the number of legitimate
visitors tended to decrease concomitantly. We found that the number of flowers
pollinated on a focal inflorescence decreased with the number of prior robbing
events. However, in the manipulative experiment, fruit set and fruit volume did
not vary significantly between low robbing and control treatments. Our findings
challenge the idea that robbers have a negative impact on plant fitness through
female function. This study also adds to our understanding of the components of
pollinator-mediated reproductive isolation and the maintenance of Antirrhinum
hybrid zones.
article_processing_charge: No
author:
- first_name: Christophe
full_name: Andalo, Christophe
last_name: Andalo
- first_name: Monique
full_name: Burrus, Monique
last_name: Burrus
- first_name: Sandrine
full_name: Paute, Sandrine
last_name: Paute
- first_name: Christine
full_name: Lauzeral, Christine
last_name: Lauzeral
- first_name: David
full_name: Field, David
id: 419049E2-F248-11E8-B48F-1D18A9856A87
last_name: Field
orcid: 0000-0002-4014-8478
citation:
ama: Andalo C, Burrus M, Paute S, Lauzeral C, Field D. Prevalence of legitimate
pollinators and nectar robbers and the consequences for fruit set in an Antirrhinum
majus hybrid zone. Botany Letters. 2019;166(1):80-92. doi:10.1080/23818107.2018.1545142
apa: Andalo, C., Burrus, M., Paute, S., Lauzeral, C., & Field, D. (2019). Prevalence
of legitimate pollinators and nectar robbers and the consequences for fruit set
in an Antirrhinum majus hybrid zone. Botany Letters. Taylor and Francis.
https://doi.org/10.1080/23818107.2018.1545142
chicago: Andalo, Christophe, Monique Burrus, Sandrine Paute, Christine Lauzeral,
and David Field. “Prevalence of Legitimate Pollinators and Nectar Robbers and
the Consequences for Fruit Set in an Antirrhinum Majus Hybrid Zone.” Botany
Letters. Taylor and Francis, 2019. https://doi.org/10.1080/23818107.2018.1545142.
ieee: C. Andalo, M. Burrus, S. Paute, C. Lauzeral, and D. Field, “Prevalence of
legitimate pollinators and nectar robbers and the consequences for fruit set in
an Antirrhinum majus hybrid zone,” Botany Letters, vol. 166, no. 1. Taylor
and Francis, pp. 80–92, 2019.
ista: Andalo C, Burrus M, Paute S, Lauzeral C, Field D. 2019. Prevalence of legitimate
pollinators and nectar robbers and the consequences for fruit set in an Antirrhinum
majus hybrid zone. Botany Letters. 166(1), 80–92.
mla: Andalo, Christophe, et al. “Prevalence of Legitimate Pollinators and Nectar
Robbers and the Consequences for Fruit Set in an Antirrhinum Majus Hybrid Zone.”
Botany Letters, vol. 166, no. 1, Taylor and Francis, 2019, pp. 80–92, doi:10.1080/23818107.2018.1545142.
short: C. Andalo, M. Burrus, S. Paute, C. Lauzeral, D. Field, Botany Letters 166
(2019) 80–92.
date_created: 2018-12-16T22:59:20Z
date_published: 2019-01-01T00:00:00Z
date_updated: 2023-08-24T14:34:12Z
day: '01'
department:
- _id: NiBa
doi: 10.1080/23818107.2018.1545142
external_id:
isi:
- '000463802800009'
intvolume: ' 166'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa_version: None
page: 80-92
publication: Botany Letters
publication_identifier:
eissn:
- '23818115'
issn:
- '23818107'
publication_status: published
publisher: Taylor and Francis
quality_controlled: '1'
scopus_import: '1'
status: public
title: Prevalence of legitimate pollinators and nectar robbers and the consequences
for fruit set in an Antirrhinum majus hybrid zone
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 166
year: '2019'
...
---
_id: '5790'
abstract:
- lang: eng
text: The partial representation extension problem is a recently introduced generalization
of the recognition problem. A circle graph is an intersection graph of chords
of a circle. We study the partial representation extension problem for circle
graphs, where the input consists of a graph G and a partial representation R′
giving some predrawn chords that represent an induced subgraph of G. The question
is whether one can extend R′ to a representation R of the entire graph G, that
is, whether one can draw the remaining chords into a partially predrawn representation
to obtain a representation of G. Our main result is an O(n3) time algorithm for
partial representation extension of circle graphs, where n is the number of vertices.
To show this, we describe the structure of all representations of a circle graph
using split decomposition. This can be of independent interest.
article_processing_charge: No
article_type: original
author:
- first_name: Steven
full_name: Chaplick, Steven
last_name: Chaplick
- first_name: Radoslav
full_name: Fulek, Radoslav
id: 39F3FFE4-F248-11E8-B48F-1D18A9856A87
last_name: Fulek
orcid: 0000-0001-8485-1774
- first_name: Pavel
full_name: Klavík, Pavel
last_name: Klavík
citation:
ama: Chaplick S, Fulek R, Klavík P. Extending partial representations of circle
graphs. Journal of Graph Theory. 2019;91(4):365-394. doi:10.1002/jgt.22436
apa: Chaplick, S., Fulek, R., & Klavík, P. (2019). Extending partial representations
of circle graphs. Journal of Graph Theory. Wiley. https://doi.org/10.1002/jgt.22436
chicago: Chaplick, Steven, Radoslav Fulek, and Pavel Klavík. “Extending Partial
Representations of Circle Graphs.” Journal of Graph Theory. Wiley, 2019.
https://doi.org/10.1002/jgt.22436.
ieee: S. Chaplick, R. Fulek, and P. Klavík, “Extending partial representations of
circle graphs,” Journal of Graph Theory, vol. 91, no. 4. Wiley, pp. 365–394,
2019.
ista: Chaplick S, Fulek R, Klavík P. 2019. Extending partial representations of
circle graphs. Journal of Graph Theory. 91(4), 365–394.
mla: Chaplick, Steven, et al. “Extending Partial Representations of Circle Graphs.”
Journal of Graph Theory, vol. 91, no. 4, Wiley, 2019, pp. 365–94, doi:10.1002/jgt.22436.
short: S. Chaplick, R. Fulek, P. Klavík, Journal of Graph Theory 91 (2019) 365–394.
date_created: 2018-12-30T22:59:15Z
date_published: 2019-08-01T00:00:00Z
date_updated: 2023-08-24T14:30:43Z
day: '01'
department:
- _id: UlWa
doi: 10.1002/jgt.22436
ec_funded: 1
external_id:
arxiv:
- '1309.2399'
isi:
- '000485392800004'
intvolume: ' 91'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1309.2399
month: '08'
oa: 1
oa_version: Preprint
page: 365-394
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '291734'
name: International IST Postdoc Fellowship Programme
publication: Journal of Graph Theory
publication_identifier:
issn:
- '03649024'
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: Extending partial representations of circle graphs
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 91
year: '2019'
...
---
_id: '405'
abstract:
- lang: eng
text: We investigate the quantum Jensen divergences from the viewpoint of joint
convexity. It turns out that the set of the functions which generate jointly convex
quantum Jensen divergences on positive matrices coincides with the Matrix Entropy
Class which has been introduced by Chen and Tropp quite recently.
acknowledgement: The author was supported by the ISTFELLOW program of the Institute
of Science and Technology Austria (project code IC1027FELL01) and partially supported
by the Hungarian National Research, Development and Innovation Office – NKFIH (grant
no. K124152)
article_processing_charge: No
article_type: original
author:
- first_name: Daniel
full_name: Virosztek, Daniel
id: 48DB45DA-F248-11E8-B48F-1D18A9856A87
last_name: Virosztek
orcid: 0000-0003-1109-5511
citation:
ama: Virosztek D. Jointly convex quantum Jensen divergences. Linear Algebra and
Its Applications. 2019;576:67-78. doi:10.1016/j.laa.2018.03.002
apa: Virosztek, D. (2019). Jointly convex quantum Jensen divergences. Linear
Algebra and Its Applications. Elsevier. https://doi.org/10.1016/j.laa.2018.03.002
chicago: Virosztek, Daniel. “Jointly Convex Quantum Jensen Divergences.” Linear
Algebra and Its Applications. Elsevier, 2019. https://doi.org/10.1016/j.laa.2018.03.002.
ieee: D. Virosztek, “Jointly convex quantum Jensen divergences,” Linear Algebra
and Its Applications, vol. 576. Elsevier, pp. 67–78, 2019.
ista: Virosztek D. 2019. Jointly convex quantum Jensen divergences. Linear Algebra
and Its Applications. 576, 67–78.
mla: Virosztek, Daniel. “Jointly Convex Quantum Jensen Divergences.” Linear Algebra
and Its Applications, vol. 576, Elsevier, 2019, pp. 67–78, doi:10.1016/j.laa.2018.03.002.
short: D. Virosztek, Linear Algebra and Its Applications 576 (2019) 67–78.
date_created: 2018-12-11T11:46:17Z
date_published: 2019-09-01T00:00:00Z
date_updated: 2023-08-24T14:31:47Z
day: '01'
department:
- _id: LaEr
doi: 10.1016/j.laa.2018.03.002
ec_funded: 1
external_id:
arxiv:
- '1712.05324'
isi:
- '000470955300005'
intvolume: ' 576'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1712.05324
month: '09'
oa: 1
oa_version: Preprint
page: 67-78
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '291734'
name: International IST Postdoc Fellowship Programme
publication: Linear Algebra and Its Applications
publication_status: published
publisher: Elsevier
publist_id: '7424'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Jointly convex quantum Jensen divergences
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 576
year: '2019'
...
---
_id: '175'
abstract:
- lang: eng
text: An upper bound sieve for rational points on suitable varieties isdeveloped,
together with applications tocounting rational points in thin sets,to local solubility
in families, and to the notion of “friable” rational pointswith respect to divisors.
In the special case of quadrics, sharper estimates areobtained by developing a
version of the Selberg sieve for rational points.
article_processing_charge: No
author:
- first_name: Timothy D
full_name: Browning, Timothy D
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: Daniel
full_name: Loughran, Daniel
last_name: Loughran
citation:
ama: Browning TD, Loughran D. Sieving rational points on varieties. Transactions
of the American Mathematical Society. 2019;371(8):5757-5785. doi:10.1090/tran/7514
apa: Browning, T. D., & Loughran, D. (2019). Sieving rational points on varieties.
Transactions of the American Mathematical Society. American Mathematical
Society. https://doi.org/10.1090/tran/7514
chicago: Browning, Timothy D, and Daniel Loughran. “Sieving Rational Points on Varieties.”
Transactions of the American Mathematical Society. American Mathematical
Society, 2019. https://doi.org/10.1090/tran/7514.
ieee: T. D. Browning and D. Loughran, “Sieving rational points on varieties,” Transactions
of the American Mathematical Society, vol. 371, no. 8. American Mathematical
Society, pp. 5757–5785, 2019.
ista: Browning TD, Loughran D. 2019. Sieving rational points on varieties. Transactions
of the American Mathematical Society. 371(8), 5757–5785.
mla: Browning, Timothy D., and Daniel Loughran. “Sieving Rational Points on Varieties.”
Transactions of the American Mathematical Society, vol. 371, no. 8, American
Mathematical Society, 2019, pp. 5757–85, doi:10.1090/tran/7514.
short: T.D. Browning, D. Loughran, Transactions of the American Mathematical Society
371 (2019) 5757–5785.
date_created: 2018-12-11T11:45:01Z
date_published: 2019-04-15T00:00:00Z
date_updated: 2023-08-24T14:34:56Z
day: '15'
department:
- _id: TiBr
doi: 10.1090/tran/7514
external_id:
arxiv:
- '1705.01999'
isi:
- '000464034200019'
intvolume: ' 371'
isi: 1
issue: '8'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1705.01999
month: '04'
oa: 1
oa_version: Preprint
page: 5757-5785
publication: Transactions of the American Mathematical Society
publication_identifier:
eissn:
- '10886850'
issn:
- '00029947'
publication_status: published
publisher: American Mathematical Society
publist_id: '7746'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Sieving rational points on varieties
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 371
year: '2019'
...
---
_id: '319'
abstract:
- lang: eng
text: We study spaces of modelled distributions with singular behaviour near the
boundary of a domain that, in the context of the theory of regularity structures,
allow one to give robust solution theories for singular stochastic PDEs with boundary
conditions. The calculus of modelled distributions established in Hairer (Invent
Math 198(2):269–504, 2014. https://doi.org/10.1007/s00222-014-0505-4) is extended
to this setting. We formulate and solve fixed point problems in these spaces with
a class of kernels that is sufficiently large to cover in particular the Dirichlet
and Neumann heat kernels. These results are then used to provide solution theories
for the KPZ equation with Dirichlet and Neumann boundary conditions and for the
2D generalised parabolic Anderson model with Dirichlet boundary conditions. In
the case of the KPZ equation with Neumann boundary conditions, we show that, depending
on the class of mollifiers one considers, a “boundary renormalisation” takes place.
In other words, there are situations in which a certain boundary condition is
applied to an approximation to the KPZ equation, but the limiting process is the
Hopf–Cole solution to the KPZ equation with a different boundary condition.
acknowledgement: "MG thanks the support of the LMS Postdoctoral Mobility Grant.\r\n\r\n"
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Mate
full_name: Gerencser, Mate
id: 44ECEDF2-F248-11E8-B48F-1D18A9856A87
last_name: Gerencser
- first_name: Martin
full_name: Hairer, Martin
last_name: Hairer
citation:
ama: Gerencser M, Hairer M. Singular SPDEs in domains with boundaries. Probability
Theory and Related Fields. 2019;173(3-4):697–758. doi:10.1007/s00440-018-0841-1
apa: Gerencser, M., & Hairer, M. (2019). Singular SPDEs in domains with boundaries.
Probability Theory and Related Fields. Springer. https://doi.org/10.1007/s00440-018-0841-1
chicago: Gerencser, Mate, and Martin Hairer. “Singular SPDEs in Domains with Boundaries.”
Probability Theory and Related Fields. Springer, 2019. https://doi.org/10.1007/s00440-018-0841-1.
ieee: M. Gerencser and M. Hairer, “Singular SPDEs in domains with boundaries,” Probability
Theory and Related Fields, vol. 173, no. 3–4. Springer, pp. 697–758, 2019.
ista: Gerencser M, Hairer M. 2019. Singular SPDEs in domains with boundaries. Probability
Theory and Related Fields. 173(3–4), 697–758.
mla: Gerencser, Mate, and Martin Hairer. “Singular SPDEs in Domains with Boundaries.”
Probability Theory and Related Fields, vol. 173, no. 3–4, Springer, 2019,
pp. 697–758, doi:10.1007/s00440-018-0841-1.
short: M. Gerencser, M. Hairer, Probability Theory and Related Fields 173 (2019)
697–758.
date_created: 2018-12-11T11:45:48Z
date_published: 2019-04-01T00:00:00Z
date_updated: 2023-08-24T14:38:32Z
day: '01'
ddc:
- '510'
department:
- _id: JaMa
doi: 10.1007/s00440-018-0841-1
external_id:
isi:
- '000463613800001'
file:
- access_level: open_access
checksum: 288d16ef7291242f485a9660979486e3
content_type: application/pdf
creator: dernst
date_created: 2018-12-17T16:25:24Z
date_updated: 2020-07-14T12:46:03Z
file_id: '5722'
file_name: 2018_ProbTheory_Gerencser.pdf
file_size: 893182
relation: main_file
file_date_updated: 2020-07-14T12:46:03Z
has_accepted_license: '1'
intvolume: ' 173'
isi: 1
issue: 3-4
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 697–758
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
name: IST Austria Open Access Fund
publication: Probability Theory and Related Fields
publication_identifier:
eissn:
- '14322064'
issn:
- '01788051'
publication_status: published
publisher: Springer
publist_id: '7546'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Singular SPDEs in domains with boundaries
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 173
year: '2019'
...
---
_id: '429'
abstract:
- lang: eng
text: We consider real symmetric or complex hermitian random matrices with correlated
entries. We prove local laws for the resolvent and universality of the local eigenvalue
statistics in the bulk of the spectrum. The correlations have fast decay but are
otherwise of general form. The key novelty is the detailed stability analysis
of the corresponding matrix valued Dyson equation whose solution is the deterministic
limit of the resolvent.
acknowledgement: "Open access funding provided by Institute of Science and Technology
(IST Austria).\r\n"
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Oskari H
full_name: Ajanki, Oskari H
id: 36F2FB7E-F248-11E8-B48F-1D18A9856A87
last_name: Ajanki
- first_name: László
full_name: Erdös, László
id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
last_name: Erdös
orcid: 0000-0001-5366-9603
- first_name: Torben H
full_name: Krüger, Torben H
id: 3020C786-F248-11E8-B48F-1D18A9856A87
last_name: Krüger
orcid: 0000-0002-4821-3297
citation:
ama: Ajanki OH, Erdös L, Krüger TH. Stability of the matrix Dyson equation and random
matrices with correlations. Probability Theory and Related Fields. 2019;173(1-2):293–373.
doi:10.1007/s00440-018-0835-z
apa: Ajanki, O. H., Erdös, L., & Krüger, T. H. (2019). Stability of the matrix
Dyson equation and random matrices with correlations. Probability Theory and
Related Fields. Springer. https://doi.org/10.1007/s00440-018-0835-z
chicago: Ajanki, Oskari H, László Erdös, and Torben H Krüger. “Stability of the
Matrix Dyson Equation and Random Matrices with Correlations.” Probability Theory
and Related Fields. Springer, 2019. https://doi.org/10.1007/s00440-018-0835-z.
ieee: O. H. Ajanki, L. Erdös, and T. H. Krüger, “Stability of the matrix Dyson equation
and random matrices with correlations,” Probability Theory and Related Fields,
vol. 173, no. 1–2. Springer, pp. 293–373, 2019.
ista: Ajanki OH, Erdös L, Krüger TH. 2019. Stability of the matrix Dyson equation
and random matrices with correlations. Probability Theory and Related Fields.
173(1–2), 293–373.
mla: Ajanki, Oskari H., et al. “Stability of the Matrix Dyson Equation and Random
Matrices with Correlations.” Probability Theory and Related Fields, vol.
173, no. 1–2, Springer, 2019, pp. 293–373, doi:10.1007/s00440-018-0835-z.
short: O.H. Ajanki, L. Erdös, T.H. Krüger, Probability Theory and Related Fields
173 (2019) 293–373.
date_created: 2018-12-11T11:46:25Z
date_published: 2019-02-01T00:00:00Z
date_updated: 2023-08-24T14:39:00Z
day: '01'
ddc:
- '510'
department:
- _id: LaEr
doi: 10.1007/s00440-018-0835-z
ec_funded: 1
external_id:
isi:
- '000459396500007'
file:
- access_level: open_access
checksum: f9354fa5c71f9edd17132588f0dc7d01
content_type: application/pdf
creator: dernst
date_created: 2018-12-17T16:12:08Z
date_updated: 2020-07-14T12:46:26Z
file_id: '5720'
file_name: 2018_ProbTheory_Ajanki.pdf
file_size: 1201840
relation: main_file
file_date_updated: 2020-07-14T12:46:26Z
has_accepted_license: '1'
intvolume: ' 173'
isi: 1
issue: 1-2
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 293–373
project:
- _id: 258DCDE6-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '338804'
name: Random matrices, universality and disordered quantum systems
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
name: IST Austria Open Access Fund
publication: Probability Theory and Related Fields
publication_identifier:
eissn:
- '14322064'
issn:
- '01788051'
publication_status: published
publisher: Springer
publist_id: '7394'
quality_controlled: '1'
scopus_import: '1'
status: public
title: Stability of the matrix Dyson equation and random matrices with correlations
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 173
year: '2019'
...
---
_id: '5947'
abstract:
- lang: eng
text: Graph algorithms applied in many applications, including social networks,
communication networks, VLSI design, graphics, and several others, require dynamic
modifications - addition and removal of vertices and/or edges - in the graph.
This paper presents a novel concurrent non-blocking algorithm to implement a dynamic
unbounded directed graph in a shared-memory machine. The addition and removal
operations of vertices and edges are lock-free. For a finite sized graph, the
lookup operations are wait-free. Most significant component of the presented algorithm
is the reachability query in a concurrent graph. The reachability queries in our
algorithm are obstruction-free and thus impose minimal additional synchronization
cost over other operations. We prove that each of the data structure operations
are linearizable. We extensively evaluate a sample C/C++ implementation of the
algorithm through a number of micro-benchmarks. The experimental results show
that the proposed algorithm scales well with the number of threads and on an average
provides 5 to 7x performance improvement over a concurrent graph implementation
using coarse-grained locking.
article_processing_charge: No
author:
- first_name: Bapi
full_name: Chatterjee, Bapi
id: 3C41A08A-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-2742-4028
- first_name: Sathya
full_name: Peri, Sathya
last_name: Peri
- first_name: Muktikanta
full_name: Sa, Muktikanta
last_name: Sa
- first_name: Nandini
full_name: Singhal, Nandini
last_name: Singhal
citation:
ama: 'Chatterjee B, Peri S, Sa M, Singhal N. A simple and practical concurrent non-blocking
unbounded graph with linearizable reachability queries. In: ACM International
Conference Proceeding Series. ACM; 2019:168-177. doi:10.1145/3288599.3288617'
apa: 'Chatterjee, B., Peri, S., Sa, M., & Singhal, N. (2019). A simple and practical
concurrent non-blocking unbounded graph with linearizable reachability queries.
In ACM International Conference Proceeding Series (pp. 168–177). Bangalore,
India: ACM. https://doi.org/10.1145/3288599.3288617'
chicago: Chatterjee, Bapi, Sathya Peri, Muktikanta Sa, and Nandini Singhal. “A Simple
and Practical Concurrent Non-Blocking Unbounded Graph with Linearizable Reachability
Queries.” In ACM International Conference Proceeding Series, 168–77. ACM,
2019. https://doi.org/10.1145/3288599.3288617.
ieee: B. Chatterjee, S. Peri, M. Sa, and N. Singhal, “A simple and practical concurrent
non-blocking unbounded graph with linearizable reachability queries,” in ACM
International Conference Proceeding Series, Bangalore, India, 2019, pp. 168–177.
ista: 'Chatterjee B, Peri S, Sa M, Singhal N. 2019. A simple and practical concurrent
non-blocking unbounded graph with linearizable reachability queries. ACM International
Conference Proceeding Series. ICDCN: Conference on Distributed Computing and Networking,
168–177.'
mla: Chatterjee, Bapi, et al. “A Simple and Practical Concurrent Non-Blocking Unbounded
Graph with Linearizable Reachability Queries.” ACM International Conference
Proceeding Series, ACM, 2019, pp. 168–77, doi:10.1145/3288599.3288617.
short: B. Chatterjee, S. Peri, M. Sa, N. Singhal, in:, ACM International Conference
Proceeding Series, ACM, 2019, pp. 168–177.
conference:
end_date: 2019-01-07
location: Bangalore, India
name: 'ICDCN: Conference on Distributed Computing and Networking'
start_date: 2019-01-04
date_created: 2019-02-10T22:59:17Z
date_published: 2019-01-04T00:00:00Z
date_updated: 2023-08-24T14:41:53Z
day: '04'
department:
- _id: DaAl
doi: 10.1145/3288599.3288617
external_id:
arxiv:
- '1809.00896'
isi:
- '000484491600019'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1809.00896
month: '01'
oa: 1
oa_version: Preprint
page: 168-177
publication: ACM International Conference Proceeding Series
publication_identifier:
isbn:
- '978-1-4503-6094-4 '
publication_status: published
publisher: ACM
quality_controlled: '1'
scopus_import: '1'
status: public
title: A simple and practical concurrent non-blocking unbounded graph with linearizable
reachability queries
type: conference
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
year: '2019'
...
---
_id: '5857'
abstract:
- lang: eng
text: 'A thrackle is a graph drawn in the plane so that every pair of its edges
meet exactly once: either at a common end vertex or in a proper crossing. We prove
that any thrackle of n vertices has at most 1.3984n edges. Quasi-thrackles are
defined similarly, except that every pair of edges that do not share a vertex
are allowed to cross an odd number of times. It is also shown that the maximum
number of edges of a quasi-thrackle on n vertices is [Formula presented](n−1),
and that this bound is best possible for infinitely many values of n.'
article_processing_charge: No
article_type: original
author:
- first_name: Radoslav
full_name: Fulek, Radoslav
id: 39F3FFE4-F248-11E8-B48F-1D18A9856A87
last_name: Fulek
orcid: 0000-0001-8485-1774
- first_name: János
full_name: Pach, János
last_name: Pach
citation:
ama: 'Fulek R, Pach J. Thrackles: An improved upper bound. Discrete Applied Mathematics.
2019;259(4):266-231. doi:10.1016/j.dam.2018.12.025'
apa: 'Fulek, R., & Pach, J. (2019). Thrackles: An improved upper bound. Discrete
Applied Mathematics. Elsevier. https://doi.org/10.1016/j.dam.2018.12.025'
chicago: 'Fulek, Radoslav, and János Pach. “Thrackles: An Improved Upper Bound.”
Discrete Applied Mathematics. Elsevier, 2019. https://doi.org/10.1016/j.dam.2018.12.025.'
ieee: 'R. Fulek and J. Pach, “Thrackles: An improved upper bound,” Discrete Applied
Mathematics, vol. 259, no. 4. Elsevier, pp. 266–231, 2019.'
ista: 'Fulek R, Pach J. 2019. Thrackles: An improved upper bound. Discrete Applied
Mathematics. 259(4), 266–231.'
mla: 'Fulek, Radoslav, and János Pach. “Thrackles: An Improved Upper Bound.” Discrete
Applied Mathematics, vol. 259, no. 4, Elsevier, 2019, pp. 266–231, doi:10.1016/j.dam.2018.12.025.'
short: R. Fulek, J. Pach, Discrete Applied Mathematics 259 (2019) 266–231.
date_created: 2019-01-20T22:59:17Z
date_published: 2019-04-30T00:00:00Z
date_updated: 2023-08-24T14:39:33Z
day: '30'
department:
- _id: UlWa
doi: 10.1016/j.dam.2018.12.025
external_id:
arxiv:
- '1708.08037'
isi:
- '000466061100020'
intvolume: ' 259'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1708.08037
month: '04'
oa: 1
oa_version: Preprint
page: 266-231
project:
- _id: 261FA626-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: M02281
name: Eliminating intersections in drawings of graphs
publication: Discrete Applied Mathematics
publication_identifier:
issn:
- 0166218X
publication_status: published
publisher: Elsevier
quality_controlled: '1'
related_material:
record:
- id: '433'
relation: earlier_version
status: public
scopus_import: '1'
status: public
title: 'Thrackles: An improved upper bound'
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 259
year: '2019'
...
---
_id: '5944'
abstract:
- lang: eng
text: Understanding the thermodynamics of the duplication process is a fundamental
step towards a comprehensive physical theory of biological systems. However, the
immense complexity of real cells obscures the fundamental tensions between energy
gradients and entropic contributions that underlie duplication. The study of synthetic,
feasible systems reproducing part of the key ingredients of living entities but
overcoming major sources of biological complexity is of great relevance to deepen
the comprehension of the fundamental thermodynamic processes underlying life and
its prevalence. In this paper an abstract—yet realistic—synthetic system made
of small synthetic protocell aggregates is studied in detail. A fundamental relation
between free energy and entropic gradients is derived for a general, non-equilibrium
scenario, setting the thermodynamic conditions for the occurrence and prevalence
of duplication phenomena. This relation sets explicitly how the energy gradients
invested in creating and maintaining structural—and eventually, functional—elements
of the system must always compensate the entropic gradients, whose contributions
come from changes in the translational, configurational, and macrostate entropies,
as well as from dissipation due to irreversible transitions. Work/energy relations
are also derived, defining lower bounds on the energy required for the duplication
event to take place. A specific example including real ternary emulsions is provided
in order to grasp the orders of magnitude involved in the problem. It is found
that the minimal work invested over the system to trigger a duplication event
is around ~ 10−13J , which results, in the case of duplication of all the vesicles
contained in a liter of emulsion, in an amount of energy around ~ 1kJ . Without
aiming to describe a truly biological process of duplication, this theoretical
contribution seeks to explicitly define and identify the key actors that participate
in it.
article_number: '9'
article_processing_charge: No
author:
- first_name: Bernat
full_name: Corominas-Murtra, Bernat
id: 43BE2298-F248-11E8-B48F-1D18A9856A87
last_name: Corominas-Murtra
orcid: 0000-0001-9806-5643
citation:
ama: Corominas-Murtra B. Thermodynamics of duplication thresholds in synthetic protocell
systems. Life. 2019;9(1). doi:10.3390/life9010009
apa: Corominas-Murtra, B. (2019). Thermodynamics of duplication thresholds in synthetic
protocell systems. Life. MDPI. https://doi.org/10.3390/life9010009
chicago: Corominas-Murtra, Bernat. “Thermodynamics of Duplication Thresholds in
Synthetic Protocell Systems.” Life. MDPI, 2019. https://doi.org/10.3390/life9010009.
ieee: B. Corominas-Murtra, “Thermodynamics of duplication thresholds in synthetic
protocell systems,” Life, vol. 9, no. 1. MDPI, 2019.
ista: Corominas-Murtra B. 2019. Thermodynamics of duplication thresholds in synthetic
protocell systems. Life. 9(1), 9.
mla: Corominas-Murtra, Bernat. “Thermodynamics of Duplication Thresholds in Synthetic
Protocell Systems.” Life, vol. 9, no. 1, 9, MDPI, 2019, doi:10.3390/life9010009.
short: B. Corominas-Murtra, Life 9 (2019).
date_created: 2019-02-10T22:59:15Z
date_published: 2019-01-15T00:00:00Z
date_updated: 2023-08-24T14:43:41Z
day: '15'
ddc:
- '570'
department:
- _id: EdHa
doi: 10.3390/life9010009
external_id:
isi:
- '000464125500001'
file:
- access_level: open_access
checksum: 7d2322cd96ace41959909b66702d5cf4
content_type: application/pdf
creator: dernst
date_created: 2019-02-11T10:45:27Z
date_updated: 2020-07-14T12:47:13Z
file_id: '5951'
file_name: 2019_Life_Corominas.pdf
file_size: 963454
relation: main_file
file_date_updated: 2020-07-14T12:47:13Z
has_accepted_license: '1'
intvolume: ' 9'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Life
publication_identifier:
eissn:
- '20751729'
publication_status: published
publisher: MDPI
quality_controlled: '1'
scopus_import: '1'
status: public
title: Thermodynamics of duplication thresholds in synthetic protocell systems
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 9
year: '2019'
...
---
_id: '6029'
abstract:
- lang: eng
text: Protein micropatterning has become an important tool for many biomedical applications
as well as in academic research. Current techniques that allow to reduce the feature
size of patterns below 1 μm are, however, often costly and require sophisticated
equipment. We present here a straightforward and convenient method to generate
highly condensed nanopatterns of proteins without the need for clean room facilities
or expensive equipment. Our approach is based on nanocontact printing and allows
for the fabrication of protein patterns with feature sizes of 80 nm and periodicities
down to 140 nm. This was made possible by the use of the material X-poly(dimethylsiloxane)
(X-PDMS) in a two-layer stamp layout for protein printing. In a proof of principle,
different proteins at various scales were printed and the pattern quality was
evaluated by atomic force microscopy (AFM) and super-resolution fluorescence microscopy.
article_number: '655'
article_processing_charge: No
author:
- first_name: Marco
full_name: Lindner, Marco
last_name: Lindner
- first_name: Aliz
full_name: Tresztenyak, Aliz
last_name: Tresztenyak
- first_name: Gergö
full_name: Fülöp, Gergö
last_name: Fülöp
- first_name: Wiebke
full_name: Jahr, Wiebke
id: 425C1CE8-F248-11E8-B48F-1D18A9856A87
last_name: Jahr
- first_name: Adrian
full_name: Prinz, Adrian
last_name: Prinz
- first_name: Iris
full_name: Prinz, Iris
last_name: Prinz
- first_name: Johann G
full_name: Danzl, Johann G
id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87
last_name: Danzl
orcid: 0000-0001-8559-3973
- first_name: Gerhard J.
full_name: Schütz, Gerhard J.
last_name: Schütz
- first_name: Eva
full_name: Sevcsik, Eva
last_name: Sevcsik
citation:
ama: Lindner M, Tresztenyak A, Fülöp G, et al. A fast and simple contact printing
approach to generate 2D protein nanopatterns. Frontiers in Chemistry. 2019;6.
doi:10.3389/fchem.2018.00655
apa: Lindner, M., Tresztenyak, A., Fülöp, G., Jahr, W., Prinz, A., Prinz, I., …
Sevcsik, E. (2019). A fast and simple contact printing approach to generate 2D
protein nanopatterns. Frontiers in Chemistry. Frontiers Media S.A. https://doi.org/10.3389/fchem.2018.00655
chicago: Lindner, Marco, Aliz Tresztenyak, Gergö Fülöp, Wiebke Jahr, Adrian Prinz,
Iris Prinz, Johann G Danzl, Gerhard J. Schütz, and Eva Sevcsik. “A Fast and Simple
Contact Printing Approach to Generate 2D Protein Nanopatterns.” Frontiers in
Chemistry. Frontiers Media S.A., 2019. https://doi.org/10.3389/fchem.2018.00655.
ieee: M. Lindner et al., “A fast and simple contact printing approach to
generate 2D protein nanopatterns,” Frontiers in Chemistry, vol. 6. Frontiers
Media S.A., 2019.
ista: Lindner M, Tresztenyak A, Fülöp G, Jahr W, Prinz A, Prinz I, Danzl JG, Schütz
GJ, Sevcsik E. 2019. A fast and simple contact printing approach to generate 2D
protein nanopatterns. Frontiers in Chemistry. 6, 655.
mla: Lindner, Marco, et al. “A Fast and Simple Contact Printing Approach to Generate
2D Protein Nanopatterns.” Frontiers in Chemistry, vol. 6, 655, Frontiers
Media S.A., 2019, doi:10.3389/fchem.2018.00655.
short: M. Lindner, A. Tresztenyak, G. Fülöp, W. Jahr, A. Prinz, I. Prinz, J.G. Danzl,
G.J. Schütz, E. Sevcsik, Frontiers in Chemistry 6 (2019).
date_created: 2019-02-17T22:59:24Z
date_published: 2019-01-24T00:00:00Z
date_updated: 2023-08-24T14:45:38Z
day: '24'
ddc:
- '540'
department:
- _id: JoDa
doi: 10.3389/fchem.2018.00655
external_id:
isi:
- '000456718000001'
file:
- access_level: open_access
checksum: 7841301d7c53b56ef873791b4b6f7b24
content_type: application/pdf
creator: dernst
date_created: 2019-02-18T15:10:34Z
date_updated: 2020-07-14T12:47:17Z
file_id: '6039'
file_name: 2019_frontiers_Lindner.pdf
file_size: 1766820
relation: main_file
file_date_updated: 2020-07-14T12:47:17Z
has_accepted_license: '1'
intvolume: ' 6'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
publication: Frontiers in Chemistry
publication_identifier:
eissn:
- '22962646'
publication_status: published
publisher: Frontiers Media S.A.
quality_controlled: '1'
scopus_import: '1'
status: public
title: A fast and simple contact printing approach to generate 2D protein nanopatterns
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 6
year: '2019'
...
---
_id: '6028'
abstract:
- lang: eng
text: We give a construction allowing us to build local renormalized solutions to
general quasilinear stochastic PDEs within the theory of regularity structures,
thus greatly generalizing the recent results of [1, 5, 11]. Loosely speaking,
our construction covers quasilinear variants of all classes of equations for which
the general construction of [3, 4, 7] applies, including in particular one‐dimensional
systems with KPZ‐type nonlinearities driven by space‐time white noise. In a less
singular and more specific case, we furthermore show that the counterterms introduced
by the renormalization procedure are given by local functionals of the solution.
The main feature of our construction is that it allows exploitation of a number
of existing results developed for the semilinear case, so that the number of additional
arguments it requires is relatively small.
article_processing_charge: Yes (via OA deal)
author:
- first_name: Mate
full_name: Gerencser, Mate
id: 44ECEDF2-F248-11E8-B48F-1D18A9856A87
last_name: Gerencser
- first_name: Martin
full_name: Hairer, Martin
last_name: Hairer
citation:
ama: Gerencser M, Hairer M. A solution theory for quasilinear singular SPDEs. Communications
on Pure and Applied Mathematics. 2019;72(9):1983-2005. doi:10.1002/cpa.21816
apa: Gerencser, M., & Hairer, M. (2019). A solution theory for quasilinear singular
SPDEs. Communications on Pure and Applied Mathematics. Wiley. https://doi.org/10.1002/cpa.21816
chicago: Gerencser, Mate, and Martin Hairer. “A Solution Theory for Quasilinear
Singular SPDEs.” Communications on Pure and Applied Mathematics. Wiley,
2019. https://doi.org/10.1002/cpa.21816.
ieee: M. Gerencser and M. Hairer, “A solution theory for quasilinear singular SPDEs,”
Communications on Pure and Applied Mathematics, vol. 72, no. 9. Wiley,
pp. 1983–2005, 2019.
ista: Gerencser M, Hairer M. 2019. A solution theory for quasilinear singular SPDEs.
Communications on Pure and Applied Mathematics. 72(9), 1983–2005.
mla: Gerencser, Mate, and Martin Hairer. “A Solution Theory for Quasilinear Singular
SPDEs.” Communications on Pure and Applied Mathematics, vol. 72, no. 9,
Wiley, 2019, pp. 1983–2005, doi:10.1002/cpa.21816.
short: M. Gerencser, M. Hairer, Communications on Pure and Applied Mathematics 72
(2019) 1983–2005.
date_created: 2019-02-17T22:59:24Z
date_published: 2019-02-08T00:00:00Z
date_updated: 2023-08-24T14:44:31Z
day: '08'
ddc:
- '500'
department:
- _id: JaMa
doi: 10.1002/cpa.21816
external_id:
isi:
- '000475465000003'
file:
- access_level: open_access
checksum: 09aec427eb48c0f96a1cce9ff53f013b
content_type: application/pdf
creator: kschuh
date_created: 2020-01-07T13:25:55Z
date_updated: 2020-07-14T12:47:17Z
file_id: '7237'
file_name: 2019_Wiley_Gerencser.pdf
file_size: 381350
relation: main_file
file_date_updated: 2020-07-14T12:47:17Z
has_accepted_license: '1'
intvolume: ' 72'
isi: 1
issue: '9'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
page: 1983-2005
publication: Communications on Pure and Applied Mathematics
publication_status: published
publisher: Wiley
quality_controlled: '1'
scopus_import: '1'
status: public
title: A solution theory for quasilinear singular SPDEs
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 72
year: '2019'
...
---
_id: '5948'
abstract:
- lang: eng
text: We study the termination problem for nondeterministic probabilistic programs.
We consider the bounded termination problem that asks whether the supremum of
the expected termination time over all schedulers is bounded. First, we show that
ranking supermartingales (RSMs) are both sound and complete for proving bounded
termination over nondeterministic probabilistic programs. For nondeterministic
probabilistic programs a previous result claimed that RSMs are not complete for
bounded termination, whereas our result corrects the previous flaw and establishes
completeness with a rigorous proof. Second, we present the first sound approach
to establish lower bounds on expected termination time through RSMs.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Hongfei
full_name: Fu, Hongfei
last_name: Fu
- first_name: Krishnendu
full_name: Chatterjee, Krishnendu
id: 2E5DCA20-F248-11E8-B48F-1D18A9856A87
last_name: Chatterjee
orcid: 0000-0002-4561-241X
citation:
ama: 'Fu H, Chatterjee K. Termination of nondeterministic probabilistic programs.
In: International Conference on Verification, Model Checking, and Abstract
Interpretation. Vol 11388. Springer Nature; 2019:468-490. doi:10.1007/978-3-030-11245-5_22'
apa: 'Fu, H., & Chatterjee, K. (2019). Termination of nondeterministic probabilistic
programs. In International Conference on Verification, Model Checking, and
Abstract Interpretation (Vol. 11388, pp. 468–490). Cascais, Portugal: Springer
Nature. https://doi.org/10.1007/978-3-030-11245-5_22'
chicago: Fu, Hongfei, and Krishnendu Chatterjee. “Termination of Nondeterministic
Probabilistic Programs.” In International Conference on Verification, Model
Checking, and Abstract Interpretation, 11388:468–90. Springer Nature, 2019.
https://doi.org/10.1007/978-3-030-11245-5_22.
ieee: H. Fu and K. Chatterjee, “Termination of nondeterministic probabilistic programs,”
in International Conference on Verification, Model Checking, and Abstract Interpretation,
Cascais, Portugal, 2019, vol. 11388, pp. 468–490.
ista: 'Fu H, Chatterjee K. 2019. Termination of nondeterministic probabilistic programs.
International Conference on Verification, Model Checking, and Abstract Interpretation.
VMCAI: Verification, Model Checking, and Abstract Interpretation, LNCS, vol. 11388,
468–490.'
mla: Fu, Hongfei, and Krishnendu Chatterjee. “Termination of Nondeterministic Probabilistic
Programs.” International Conference on Verification, Model Checking, and Abstract
Interpretation, vol. 11388, Springer Nature, 2019, pp. 468–90, doi:10.1007/978-3-030-11245-5_22.
short: H. Fu, K. Chatterjee, in:, International Conference on Verification, Model
Checking, and Abstract Interpretation, Springer Nature, 2019, pp. 468–490.
conference:
end_date: 2019-01-15
location: Cascais, Portugal
name: 'VMCAI: Verification, Model Checking, and Abstract Interpretation'
start_date: 2019-01-13
date_created: 2019-02-10T22:59:17Z
date_published: 2019-01-11T00:00:00Z
date_updated: 2023-08-24T14:42:22Z
day: '11'
department:
- _id: KrCh
doi: 10.1007/978-3-030-11245-5_22
external_id:
arxiv:
- '1701.02944'
isi:
- '000931943000022'
intvolume: ' 11388'
isi: 1
language:
- iso: eng
main_file_link:
- url: https://arxiv.org/abs/1701.02944
month: '01'
oa_version: Preprint
page: 468-490
project:
- _id: 25892FC0-B435-11E9-9278-68D0E5697425
grant_number: ICT15-003
name: Efficient Algorithms for Computer Aided Verification
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: S 11407_N23
name: Rigorous Systems Engineering
publication: International Conference on Verification, Model Checking, and Abstract
Interpretation
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Termination of nondeterministic probabilistic programs
type: conference
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 11388
year: '2019'
...
---
_id: '5945'
abstract:
- lang: eng
text: In developing organisms, spatially prescribed cell identities are thought
to be determined by the expression levels of multiple genes. Quantitative tests
of this idea, however, require a theoretical framework capable of exposing the
rules and precision of cell specification over developmental time. We use the
gap gene network in the early fly embryo as an example to show how expression
levels of the four gap genes can be jointly decoded into an optimal specification
of position with 1% accuracy. The decoder correctly predicts, with no free parameters,
the dynamics of pair-rule expression patterns at different developmental time
points and in various mutant backgrounds. Precise cellular identities are thus
available at the earliest stages of development, contrasting the prevailing view
of positional information being slowly refined across successive layers of the
patterning network. Our results suggest that developmental enhancers closely approximate
a mathematically optimal decoding strategy.
article_processing_charge: No
article_type: original
author:
- first_name: Mariela D.
full_name: Petkova, Mariela D.
last_name: Petkova
- first_name: Gasper
full_name: Tkacik, Gasper
id: 3D494DCA-F248-11E8-B48F-1D18A9856A87
last_name: Tkacik
orcid: 0000-0002-6699-1455
- first_name: William
full_name: Bialek, William
last_name: Bialek
- first_name: Eric F.
full_name: Wieschaus, Eric F.
last_name: Wieschaus
- first_name: Thomas
full_name: Gregor, Thomas
last_name: Gregor
citation:
ama: Petkova MD, Tkačik G, Bialek W, Wieschaus EF, Gregor T. Optimal decoding of
cellular identities in a genetic network. Cell. 2019;176(4):844-855.e15.
doi:10.1016/j.cell.2019.01.007
apa: Petkova, M. D., Tkačik, G., Bialek, W., Wieschaus, E. F., & Gregor, T.
(2019). Optimal decoding of cellular identities in a genetic network. Cell.
Cell Press. https://doi.org/10.1016/j.cell.2019.01.007
chicago: Petkova, Mariela D., Gašper Tkačik, William Bialek, Eric F. Wieschaus,
and Thomas Gregor. “Optimal Decoding of Cellular Identities in a Genetic Network.”
Cell. Cell Press, 2019. https://doi.org/10.1016/j.cell.2019.01.007.
ieee: M. D. Petkova, G. Tkačik, W. Bialek, E. F. Wieschaus, and T. Gregor, “Optimal
decoding of cellular identities in a genetic network,” Cell, vol. 176,
no. 4. Cell Press, p. 844–855.e15, 2019.
ista: Petkova MD, Tkačik G, Bialek W, Wieschaus EF, Gregor T. 2019. Optimal decoding
of cellular identities in a genetic network. Cell. 176(4), 844–855.e15.
mla: Petkova, Mariela D., et al. “Optimal Decoding of Cellular Identities in a Genetic
Network.” Cell, vol. 176, no. 4, Cell Press, 2019, p. 844–855.e15, doi:10.1016/j.cell.2019.01.007.
short: M.D. Petkova, G. Tkačik, W. Bialek, E.F. Wieschaus, T. Gregor, Cell 176 (2019)
844–855.e15.
date_created: 2019-02-10T22:59:16Z
date_published: 2019-02-07T00:00:00Z
date_updated: 2023-08-24T14:42:47Z
day: '07'
department:
- _id: GaTk
doi: 10.1016/j.cell.2019.01.007
external_id:
isi:
- '000457969200015'
pmid:
- '30712870'
intvolume: ' 176'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.1016/j.cell.2019.01.007
month: '02'
oa: 1
oa_version: Published Version
page: 844-855.e15
pmid: 1
project:
- _id: 254E9036-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: P28844-B27
name: Biophysics of information processing in gene regulation
publication: Cell
publication_status: published
publisher: Cell Press
quality_controlled: '1'
related_material:
link:
- description: News on IST Homepage
relation: press_release
url: https://ist.ac.at/en/news/cells-find-their-identity-using-a-mathematically-optimal-strategy/
scopus_import: '1'
status: public
title: Optimal decoding of cellular identities in a genetic network
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 176
year: '2019'
...
---
_id: '5943'
abstract:
- lang: eng
text: The hairpin instability of a jet in a crossflow (JICF) for a low jet-to-crossflow
velocity ratio is investigated experimentally for a velocity ratio range of R
∈ (0.14, 0.75) and crossflow Reynolds numbers ReD ∈ (260, 640). From spectral
analysis we characterize the Strouhal number and amplitude of the hairpin instability
as a function of R and ReD. We demonstrate that the dynamics of the hairpins is
well described by the Landau model, and, hence, that the instability occurs through
Hopf bifurcation, similarly to other hydrodynamical oscillators such as wake behind
different bluff bodies. Using the Landau model, we determine the precise threshold
values of hairpin shedding. We also study the spatial dependence of this hydrodynamical
instability, which shows a global behaviour.
article_processing_charge: No
article_type: original
author:
- first_name: Lukasz
full_name: Klotz, Lukasz
id: 2C9AF1C2-F248-11E8-B48F-1D18A9856A87
last_name: Klotz
orcid: 0000-0003-1740-7635
- first_name: Konrad
full_name: Gumowski, Konrad
last_name: Gumowski
- first_name: José Eduardo
full_name: Wesfreid, José Eduardo
last_name: Wesfreid
citation:
ama: Klotz L, Gumowski K, Wesfreid JE. Experiments on a jet in a crossflow in the
low-velocity-ratio regime. Journal of Fluid Mechanics. 2019;863:386-406.
doi:10.1017/jfm.2018.974
apa: Klotz, L., Gumowski, K., & Wesfreid, J. E. (2019). Experiments on a jet
in a crossflow in the low-velocity-ratio regime. Journal of Fluid Mechanics.
Cambridge University Press. https://doi.org/10.1017/jfm.2018.974
chicago: Klotz, Lukasz, Konrad Gumowski, and José Eduardo Wesfreid. “Experiments
on a Jet in a Crossflow in the Low-Velocity-Ratio Regime.” Journal of Fluid
Mechanics. Cambridge University Press, 2019. https://doi.org/10.1017/jfm.2018.974.
ieee: L. Klotz, K. Gumowski, and J. E. Wesfreid, “Experiments on a jet in a crossflow
in the low-velocity-ratio regime,” Journal of Fluid Mechanics, vol. 863.
Cambridge University Press, pp. 386–406, 2019.
ista: Klotz L, Gumowski K, Wesfreid JE. 2019. Experiments on a jet in a crossflow
in the low-velocity-ratio regime. Journal of Fluid Mechanics. 863, 386–406.
mla: Klotz, Lukasz, et al. “Experiments on a Jet in a Crossflow in the Low-Velocity-Ratio
Regime.” Journal of Fluid Mechanics, vol. 863, Cambridge University Press,
2019, pp. 386–406, doi:10.1017/jfm.2018.974.
short: L. Klotz, K. Gumowski, J.E. Wesfreid, Journal of Fluid Mechanics 863 (2019)
386–406.
date_created: 2019-02-10T22:59:15Z
date_published: 2019-03-25T00:00:00Z
date_updated: 2023-08-24T14:43:13Z
day: '25'
department:
- _id: BjHo
doi: 10.1017/jfm.2018.974
ec_funded: 1
external_id:
arxiv:
- '1902.07931'
isi:
- '000526029100016'
intvolume: ' 863'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1902.07931
month: '03'
oa: 1
oa_version: Preprint
page: 386-406
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
publication: Journal of Fluid Mechanics
publication_status: published
publisher: Cambridge University Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Experiments on a jet in a crossflow in the low-velocity-ratio regime
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 863
year: '2019'
...
---
_id: '6042'
abstract:
- lang: eng
text: Static program analyzers are increasingly effective in checking correctness
properties of programs and reporting any errors found, often in the form of error
traces. However, developers still spend a significant amount of time on debugging.
This involves processing long error traces in an effort to localize a bug to a
relatively small part of the program and to identify its cause. In this paper,
we present a technique for automated fault localization that, given a program
and an error trace, efficiently narrows down the cause of the error to a few statements.
These statements are then ranked in terms of their suspiciousness. Our technique
relies only on the semantics of the given program and does not require any test
cases or user guidance. In experiments on a set of C benchmarks, we show that
our technique is effective in quickly isolating the cause of error while out-performing
other state-of-the-art fault-localization techniques.
alternative_title:
- LNCS
article_processing_charge: No
author:
- first_name: Maria
full_name: Christakis, Maria
last_name: Christakis
- first_name: Matthias
full_name: Heizmann, Matthias
last_name: Heizmann
- first_name: Muhammad Numair
full_name: Mansur, Muhammad Numair
last_name: Mansur
- first_name: Christian
full_name: Schilling, Christian
id: 3A2F4DCE-F248-11E8-B48F-1D18A9856A87
last_name: Schilling
orcid: 0000-0003-3658-1065
- first_name: Valentin
full_name: Wüstholz, Valentin
last_name: Wüstholz
citation:
ama: 'Christakis M, Heizmann M, Mansur MN, Schilling C, Wüstholz V. Semantic fault
localization and suspiciousness ranking. In: 25th International Conference
on Tools and Algorithms for the Construction and Analysis of Systems . Vol
11427. Springer Nature; 2019:226-243. doi:10.1007/978-3-030-17462-0_13'
apa: 'Christakis, M., Heizmann, M., Mansur, M. N., Schilling, C., & Wüstholz,
V. (2019). Semantic fault localization and suspiciousness ranking. In 25th
International Conference on Tools and Algorithms for the Construction and Analysis
of Systems (Vol. 11427, pp. 226–243). Prague, Czech Republic: Springer Nature.
https://doi.org/10.1007/978-3-030-17462-0_13'
chicago: Christakis, Maria, Matthias Heizmann, Muhammad Numair Mansur, Christian
Schilling, and Valentin Wüstholz. “Semantic Fault Localization and Suspiciousness
Ranking.” In 25th International Conference on Tools and Algorithms for the
Construction and Analysis of Systems , 11427:226–43. Springer Nature, 2019.
https://doi.org/10.1007/978-3-030-17462-0_13.
ieee: M. Christakis, M. Heizmann, M. N. Mansur, C. Schilling, and V. Wüstholz, “Semantic
fault localization and suspiciousness ranking,” in 25th International Conference
on Tools and Algorithms for the Construction and Analysis of Systems , Prague,
Czech Republic, 2019, vol. 11427, pp. 226–243.
ista: 'Christakis M, Heizmann M, Mansur MN, Schilling C, Wüstholz V. 2019. Semantic
fault localization and suspiciousness ranking. 25th International Conference on
Tools and Algorithms for the Construction and Analysis of Systems . TACAS: Tools
and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 11427,
226–243.'
mla: Christakis, Maria, et al. “Semantic Fault Localization and Suspiciousness Ranking.”
25th International Conference on Tools and Algorithms for the Construction
and Analysis of Systems , vol. 11427, Springer Nature, 2019, pp. 226–43, doi:10.1007/978-3-030-17462-0_13.
short: M. Christakis, M. Heizmann, M.N. Mansur, C. Schilling, V. Wüstholz, in:,
25th International Conference on Tools and Algorithms for the Construction and
Analysis of Systems , Springer Nature, 2019, pp. 226–243.
conference:
end_date: 2019-04-11
location: Prague, Czech Republic
name: 'TACAS: Tools and Algorithms for the Construction and Analysis of Systems'
start_date: 2019-04-06
date_created: 2019-02-18T16:44:06Z
date_published: 2019-04-04T00:00:00Z
date_updated: 2023-08-24T14:47:45Z
day: '04'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1007/978-3-030-17462-0_13
ec_funded: 1
external_id:
isi:
- '000681166500013'
file:
- access_level: open_access
checksum: 9998496f6fe202c0a19124b4209154c6
content_type: application/pdf
creator: dernst
date_created: 2019-05-10T14:16:05Z
date_updated: 2020-07-14T12:47:17Z
file_id: '6408'
file_name: 2019_LNCS_Christakis.pdf
file_size: 773083
relation: main_file
file_date_updated: 2020-07-14T12:47:17Z
has_accepted_license: '1'
intvolume: ' 11427'
isi: 1
language:
- iso: eng
month: '04'
oa: 1
oa_version: Published Version
page: 226-243
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: Z211
name: The Wittgenstein Prize
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: S 11407_N23
name: Rigorous Systems Engineering
publication: '25th International Conference on Tools and Algorithms for the Construction
and Analysis of Systems '
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Semantic fault localization and suspiciousness ranking
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: conference
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 11427
year: '2019'
...
---
_id: '6035'
abstract:
- lang: eng
text: 'We present JuliaReach, a toolbox for set-based reachability analysis of dynamical
systems. JuliaReach consists of two main packages: Reachability, containing implementations
of reachability algorithms for continuous and hybrid systems, and LazySets, a
standalone library that implements state-of-the-art algorithms for calculus with
convex sets. The library offers both concrete and lazy set representations, where
the latter stands for the ability to delay set computations until they are needed.
The choice of the programming language Julia and the accompanying documentation
of our toolbox allow researchers to easily translate set-based algorithms from
mathematics to software in a platform-independent way, while achieving runtime
performance that is comparable to statically compiled languages. Combining lazy
operations in high dimensions and explicit computations in low dimensions, JuliaReach
can be applied to solve complex, large-scale problems.'
article_processing_charge: No
author:
- first_name: Sergiy
full_name: Bogomolov, Sergiy
id: 369D9A44-F248-11E8-B48F-1D18A9856A87
last_name: Bogomolov
orcid: 0000-0002-0686-0365
- first_name: Marcelo
full_name: Forets, Marcelo
last_name: Forets
- first_name: Goran
full_name: Frehse, Goran
last_name: Frehse
- first_name: Kostiantyn
full_name: Potomkin, Kostiantyn
last_name: Potomkin
- first_name: Christian
full_name: Schilling, Christian
id: 3A2F4DCE-F248-11E8-B48F-1D18A9856A87
last_name: Schilling
orcid: 0000-0003-3658-1065
citation:
ama: 'Bogomolov S, Forets M, Frehse G, Potomkin K, Schilling C. JuliaReach: A toolbox
for set-based reachability. In: Proceedings of the 22nd International Conference
on Hybrid Systems: Computation and Control. Vol 22. ACM; 2019:39-44. doi:10.1145/3302504.3311804'
apa: 'Bogomolov, S., Forets, M., Frehse, G., Potomkin, K., & Schilling, C. (2019).
JuliaReach: A toolbox for set-based reachability. In Proceedings of the 22nd
International Conference on Hybrid Systems: Computation and Control (Vol.
22, pp. 39–44). Montreal, QC, Canada: ACM. https://doi.org/10.1145/3302504.3311804'
chicago: 'Bogomolov, Sergiy, Marcelo Forets, Goran Frehse, Kostiantyn Potomkin,
and Christian Schilling. “JuliaReach: A Toolbox for Set-Based Reachability.” In
Proceedings of the 22nd International Conference on Hybrid Systems: Computation
and Control, 22:39–44. ACM, 2019. https://doi.org/10.1145/3302504.3311804.'
ieee: 'S. Bogomolov, M. Forets, G. Frehse, K. Potomkin, and C. Schilling, “JuliaReach:
A toolbox for set-based reachability,” in Proceedings of the 22nd International
Conference on Hybrid Systems: Computation and Control, Montreal, QC, Canada,
2019, vol. 22, pp. 39–44.'
ista: 'Bogomolov S, Forets M, Frehse G, Potomkin K, Schilling C. 2019. JuliaReach:
A toolbox for set-based reachability. Proceedings of the 22nd International Conference
on Hybrid Systems: Computation and Control. HSCC: Hybrid Systems Computation and
Control vol. 22, 39–44.'
mla: 'Bogomolov, Sergiy, et al. “JuliaReach: A Toolbox for Set-Based Reachability.”
Proceedings of the 22nd International Conference on Hybrid Systems: Computation
and Control, vol. 22, ACM, 2019, pp. 39–44, doi:10.1145/3302504.3311804.'
short: 'S. Bogomolov, M. Forets, G. Frehse, K. Potomkin, C. Schilling, in:, Proceedings
of the 22nd International Conference on Hybrid Systems: Computation and Control,
ACM, 2019, pp. 39–44.'
conference:
end_date: 2019-04-18
location: Montreal, QC, Canada
name: 'HSCC: Hybrid Systems Computation and Control'
start_date: 2019-04-16
date_created: 2019-02-18T14:43:28Z
date_published: 2019-04-16T00:00:00Z
date_updated: 2023-08-24T14:47:21Z
day: '16'
ddc:
- '000'
department:
- _id: ToHe
doi: 10.1145/3302504.3311804
ec_funded: 1
external_id:
arxiv:
- '1901.10736'
isi:
- '000516713900005'
file:
- access_level: open_access
checksum: 28ed56439aea5991c3122d4730fd828f
content_type: application/pdf
creator: cschilli
date_created: 2019-03-05T09:27:18Z
date_updated: 2020-07-14T12:47:17Z
file_id: '6067'
file_name: hscc19.pdf
file_size: 3784414
relation: main_file
file_date_updated: 2020-07-14T12:47:17Z
has_accepted_license: '1'
intvolume: ' 22'
isi: 1
keyword:
- reachability analysis
- hybrid systems
- lazy computation
language:
- iso: eng
month: '04'
oa: 1
oa_version: Submitted Version
page: 39-44
project:
- _id: 25F42A32-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: Z211
name: The Wittgenstein Prize
- _id: 25832EC2-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: S 11407_N23
name: Rigorous Systems Engineering
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
publication: 'Proceedings of the 22nd International Conference on Hybrid Systems:
Computation and Control'
publication_identifier:
isbn:
- '9781450362825'
publication_status: published
publisher: ACM
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'JuliaReach: A toolbox for set-based reachability'
type: conference
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 22
year: '2019'
...
---
_id: '6052'
abstract:
- lang: eng
text: 'Expansion microscopy is a relatively new approach to super-resolution imaging
that uses expandable hydrogels to isotropically increase the physical distance
between fluorophores in biological samples such as cell cultures or tissue slices.
The classic gel recipe results in an expansion factor of ~4×, with a resolution
of 60–80 nm. We have recently developed X10 microscopy, which uses a gel that
achieves an expansion factor of ~10×, with a resolution of ~25 nm. Here, we provide
a step-by-step protocol for X10 expansion microscopy. A typical experiment consists
of seven sequential stages: (i) immunostaining, (ii) anchoring, (iii) polymerization,
(iv) homogenization, (v) expansion, (vi) imaging, and (vii) validation. The protocol
presented here includes recommendations for optimization, pitfalls and their solutions,
and detailed guidelines that should increase reproducibility. Although our protocol
focuses on X10 expansion microscopy, we detail which of these suggestions are
also applicable to classic fourfold expansion microscopy. We exemplify our protocol
using primary hippocampal neurons from rats, but our approach can be used with
other primary cells or cultured cell lines of interest. This protocol will enable
any researcher with basic experience in immunostainings and access to an epifluorescence
microscope to perform super-resolution microscopy with X10. The procedure takes
3 d and requires ~5 h of actively handling the sample for labeling and expansion,
and another ~3 h for imaging and analysis.'
article_processing_charge: No
article_type: original
author:
- first_name: Sven M
full_name: Truckenbrodt, Sven M
id: 45812BD4-F248-11E8-B48F-1D18A9856A87
last_name: Truckenbrodt
- first_name: Christoph M
full_name: Sommer, Christoph M
id: 4DF26D8C-F248-11E8-B48F-1D18A9856A87
last_name: Sommer
orcid: 0000-0003-1216-9105
- first_name: Silvio O
full_name: Rizzoli, Silvio O
last_name: Rizzoli
- first_name: Johann G
full_name: Danzl, Johann G
id: 42EFD3B6-F248-11E8-B48F-1D18A9856A87
last_name: Danzl
orcid: 0000-0001-8559-3973
citation:
ama: Truckenbrodt SM, Sommer CM, Rizzoli SO, Danzl JG. A practical guide to optimization
in X10 expansion microscopy. Nature Protocols. 2019;14(3):832–863. doi:10.1038/s41596-018-0117-3
apa: Truckenbrodt, S. M., Sommer, C. M., Rizzoli, S. O., & Danzl, J. G. (2019).
A practical guide to optimization in X10 expansion microscopy. Nature Protocols.
Nature Publishing Group. https://doi.org/10.1038/s41596-018-0117-3
chicago: Truckenbrodt, Sven M, Christoph M Sommer, Silvio O Rizzoli, and Johann
G Danzl. “A Practical Guide to Optimization in X10 Expansion Microscopy.” Nature
Protocols. Nature Publishing Group, 2019. https://doi.org/10.1038/s41596-018-0117-3.
ieee: S. M. Truckenbrodt, C. M. Sommer, S. O. Rizzoli, and J. G. Danzl, “A practical
guide to optimization in X10 expansion microscopy,” Nature Protocols, vol.
14, no. 3. Nature Publishing Group, pp. 832–863, 2019.
ista: Truckenbrodt SM, Sommer CM, Rizzoli SO, Danzl JG. 2019. A practical guide
to optimization in X10 expansion microscopy. Nature Protocols. 14(3), 832–863.
mla: Truckenbrodt, Sven M., et al. “A Practical Guide to Optimization in X10 Expansion
Microscopy.” Nature Protocols, vol. 14, no. 3, Nature Publishing Group,
2019, pp. 832–863, doi:10.1038/s41596-018-0117-3.
short: S.M. Truckenbrodt, C.M. Sommer, S.O. Rizzoli, J.G. Danzl, Nature Protocols
14 (2019) 832–863.
date_created: 2019-02-24T22:59:20Z
date_published: 2019-03-01T00:00:00Z
date_updated: 2023-08-24T14:48:33Z
day: '01'
ddc:
- '570'
department:
- _id: JoDa
- _id: Bio
doi: 10.1038/s41596-018-0117-3
ec_funded: 1
external_id:
isi:
- '000459890700008'
pmid:
- '30778205'
file:
- access_level: open_access
checksum: 7efb9951e7ddf3e3dcc2fb92b859c623
content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document
creator: kschuh
date_created: 2021-06-29T14:41:46Z
date_updated: 2021-06-29T14:41:46Z
file_id: '9619'
file_name: 181031_Truckenbrodt_ExM_NatProtoc.docx
file_size: 84478958
relation: main_file
success: 1
file_date_updated: 2021-06-29T14:41:46Z
has_accepted_license: '1'
intvolume: ' 14'
isi: 1
issue: '3'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Submitted Version
page: 832–863
pmid: 1
project:
- _id: 260C2330-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '754411'
name: ISTplus - Postdoctoral Fellowships
- _id: 265CB4D0-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: I03600
name: Optical control of synaptic function via adhesion molecules
publication: Nature Protocols
publication_status: published
publisher: Nature Publishing Group
quality_controlled: '1'
scopus_import: '1'
status: public
title: A practical guide to optimization in X10 expansion microscopy
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 14
year: '2019'
...
---
_id: '6025'
abstract:
- lang: eng
text: Non-canonical Wnt signaling plays a central role for coordinated cell polarization
and directed migration in metazoan development. While spatiotemporally restricted
activation of non-canonical Wnt-signaling drives cell polarization in epithelial
tissues, it remains unclear whether such instructive activity is also critical
for directed mesenchymal cell migration. Here, we developed a light-activated
version of the non-canonical Wnt receptor Frizzled 7 (Fz7) to analyze how restricted
activation of non-canonical Wnt signaling affects directed anterior axial mesendoderm
(prechordal plate, ppl) cell migration within the zebrafish gastrula. We found
that Fz7 signaling is required for ppl cell protrusion formation and migration
and that spatiotemporally restricted ectopic activation is capable of redirecting
their migration. Finally, we show that uniform activation of Fz7 signaling in
ppl cells fully rescues defective directed cell migration in fz7 mutant embryos.
Together, our findings reveal that in contrast to the situation in epithelial
cells, non-canonical Wnt signaling functions permissively rather than instructively
in directed mesenchymal cell migration during gastrulation.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
article_number: e42093
article_processing_charge: No
author:
- first_name: Daniel
full_name: Capek, Daniel
id: 31C42484-F248-11E8-B48F-1D18A9856A87
last_name: Capek
orcid: 0000-0001-5199-9940
- first_name: Michael
full_name: Smutny, Michael
id: 3FE6E4E8-F248-11E8-B48F-1D18A9856A87
last_name: Smutny
orcid: 0000-0002-5920-9090
- first_name: Alexandra Madelaine
full_name: Tichy, Alexandra Madelaine
last_name: Tichy
- first_name: Maurizio
full_name: Morri, Maurizio
id: 4863116E-F248-11E8-B48F-1D18A9856A87
last_name: Morri
- first_name: Harald L
full_name: Janovjak, Harald L
id: 33BA6C30-F248-11E8-B48F-1D18A9856A87
last_name: Janovjak
orcid: 0000-0002-8023-9315
- first_name: Carl-Philipp J
full_name: Heisenberg, Carl-Philipp J
id: 39427864-F248-11E8-B48F-1D18A9856A87
last_name: Heisenberg
orcid: 0000-0002-0912-4566
citation:
ama: Capek D, Smutny M, Tichy AM, Morri M, Janovjak HL, Heisenberg C-PJ. Light-activated
Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm
cell migration. eLife. 2019;8. doi:10.7554/eLife.42093
apa: Capek, D., Smutny, M., Tichy, A. M., Morri, M., Janovjak, H. L., & Heisenberg,
C.-P. J. (2019). Light-activated Frizzled7 reveals a permissive role of non-canonical
wnt signaling in mesendoderm cell migration. ELife. eLife Sciences Publications.
https://doi.org/10.7554/eLife.42093
chicago: Capek, Daniel, Michael Smutny, Alexandra Madelaine Tichy, Maurizio Morri,
Harald L Janovjak, and Carl-Philipp J Heisenberg. “Light-Activated Frizzled7 Reveals
a Permissive Role of Non-Canonical Wnt Signaling in Mesendoderm Cell Migration.”
ELife. eLife Sciences Publications, 2019. https://doi.org/10.7554/eLife.42093.
ieee: D. Capek, M. Smutny, A. M. Tichy, M. Morri, H. L. Janovjak, and C.-P. J. Heisenberg,
“Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling
in mesendoderm cell migration,” eLife, vol. 8. eLife Sciences Publications,
2019.
ista: Capek D, Smutny M, Tichy AM, Morri M, Janovjak HL, Heisenberg C-PJ. 2019.
Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling
in mesendoderm cell migration. eLife. 8, e42093.
mla: Capek, Daniel, et al. “Light-Activated Frizzled7 Reveals a Permissive Role
of Non-Canonical Wnt Signaling in Mesendoderm Cell Migration.” ELife, vol.
8, e42093, eLife Sciences Publications, 2019, doi:10.7554/eLife.42093.
short: D. Capek, M. Smutny, A.M. Tichy, M. Morri, H.L. Janovjak, C.-P.J. Heisenberg,
ELife 8 (2019).
date_created: 2019-02-17T22:59:22Z
date_published: 2019-02-06T00:00:00Z
date_updated: 2023-08-24T14:46:01Z
day: '06'
ddc:
- '570'
department:
- _id: CaHe
- _id: HaJa
doi: 10.7554/eLife.42093
ec_funded: 1
external_id:
isi:
- '000458025300001'
file:
- access_level: open_access
checksum: 6cb4ca6d4aa96f6f187a5983aa3e660a
content_type: application/pdf
creator: dernst
date_created: 2019-02-18T15:17:21Z
date_updated: 2020-07-14T12:47:17Z
file_id: '6041'
file_name: 2019_elife_Capek.pdf
file_size: 5500707
relation: main_file
file_date_updated: 2020-07-14T12:47:17Z
has_accepted_license: '1'
intvolume: ' 8'
isi: 1
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
project:
- _id: 260F1432-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '742573'
name: Interaction and feedback between cell mechanics and fate specification in
vertebrate gastrulation
publication: eLife
publication_status: published
publisher: eLife Sciences Publications
quality_controlled: '1'
scopus_import: '1'
status: public
title: Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling
in mesendoderm cell migration
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 8
year: '2019'
...
---
_id: '6022'
abstract:
- lang: eng
text: The evolution of new species is made easier when traits under divergent ecological
selection are also mating cues. Such ecological mating cues are now considered
more common than previously thought, but we still know little about the genetic
changes underlying their evolution or more generally about the genetic basis for
assortative mating behaviors. Both tight physical linkage and the existence of
large-effect preference loci will strengthen genetic associations between behavioral
and ecological barriers, promoting the evolution of assortative mating. The warning
patterns of Heliconius melpomene and H. cydno are under disruptive selection due
to increased predation of nonmimetic hybrids and are used during mate recognition.
We carried out a genome-wide quantitative trait locus (QTL) analysis of preference
behaviors between these species and showed that divergent male preference has
a simple genetic basis. We identify three QTLs that together explain a large proportion
(approximately 60%) of the difference in preference behavior observed between
the parental species. One of these QTLs is just 1.2 (0-4.8) centiMorgans (cM)
from the major color pattern gene optix, and, individually, all three have a large
effect on the preference phenotype. Genomic divergence between H. cydno and H.
melpomene is high but broadly heterogenous, and admixture is reduced at the preference-optix
color pattern locus but not the other preference QTLs. The simple genetic architecture
we reveal will facilitate the evolution and maintenance of new species despite
ongoing gene flow by coupling behavioral and ecological aspects of reproductive
isolation.
article_number: e2005902
article_processing_charge: No
author:
- first_name: Richard M.
full_name: Merrill, Richard M.
last_name: Merrill
- first_name: Pasi
full_name: Rastas, Pasi
last_name: Rastas
- first_name: Simon H.
full_name: Martin, Simon H.
last_name: Martin
- first_name: Maria C
full_name: Melo Hurtado, Maria C
id: 386D7308-F248-11E8-B48F-1D18A9856A87
last_name: Melo Hurtado
- first_name: Sarah
full_name: Barker, Sarah
last_name: Barker
- first_name: John
full_name: Davey, John
last_name: Davey
- first_name: W. Owen
full_name: Mcmillan, W. Owen
last_name: Mcmillan
- first_name: Chris D.
full_name: Jiggins, Chris D.
last_name: Jiggins
citation:
ama: Merrill RM, Rastas P, Martin SH, et al. Genetic dissection of assortative mating
behavior. PLoS Biology. 2019;17(2). doi:10.1371/journal.pbio.2005902
apa: Merrill, R. M., Rastas, P., Martin, S. H., Melo Hurtado, M. C., Barker, S.,
Davey, J., … Jiggins, C. D. (2019). Genetic dissection of assortative mating behavior.
PLoS Biology. Public Library of Science. https://doi.org/10.1371/journal.pbio.2005902
chicago: Merrill, Richard M., Pasi Rastas, Simon H. Martin, Maria C Melo Hurtado,
Sarah Barker, John Davey, W. Owen Mcmillan, and Chris D. Jiggins. “Genetic Dissection
of Assortative Mating Behavior.” PLoS Biology. Public Library of Science,
2019. https://doi.org/10.1371/journal.pbio.2005902.
ieee: R. M. Merrill et al., “Genetic dissection of assortative mating behavior,”
PLoS Biology, vol. 17, no. 2. Public Library of Science, 2019.
ista: Merrill RM, Rastas P, Martin SH, Melo Hurtado MC, Barker S, Davey J, Mcmillan
WO, Jiggins CD. 2019. Genetic dissection of assortative mating behavior. PLoS
Biology. 17(2), e2005902.
mla: Merrill, Richard M., et al. “Genetic Dissection of Assortative Mating Behavior.”
PLoS Biology, vol. 17, no. 2, e2005902, Public Library of Science, 2019,
doi:10.1371/journal.pbio.2005902.
short: R.M. Merrill, P. Rastas, S.H. Martin, M.C. Melo Hurtado, S. Barker, J. Davey,
W.O. Mcmillan, C.D. Jiggins, PLoS Biology 17 (2019).
date_created: 2019-02-17T22:59:21Z
date_published: 2019-02-07T00:00:00Z
date_updated: 2023-08-24T14:46:23Z
day: '07'
ddc:
- '570'
department:
- _id: NiBa
doi: 10.1371/journal.pbio.2005902
external_id:
isi:
- '000460317100001'
file:
- access_level: open_access
checksum: 5f34001617ee729314ca520c049b1112
content_type: application/pdf
creator: dernst
date_created: 2019-02-18T14:57:24Z
date_updated: 2020-07-14T12:47:17Z
file_id: '6036'
file_name: 2019_PLOS_Merrill.pdf
file_size: 2005949
relation: main_file
file_date_updated: 2020-07-14T12:47:17Z
has_accepted_license: '1'
intvolume: ' 17'
isi: 1
issue: '2'
language:
- iso: eng
month: '02'
oa: 1
oa_version: Published Version
publication: PLoS Biology
publication_status: published
publisher: Public Library of Science
quality_controlled: '1'
related_material:
record:
- id: '9801'
relation: research_data
status: public
scopus_import: '1'
status: public
title: Genetic dissection of assortative mating behavior
tmp:
image: /images/cc_0.png
legal_code_url: https://creativecommons.org/publicdomain/zero/1.0/legalcode
name: Creative Commons Public Domain Dedication (CC0 1.0)
short: CC0 (1.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 17
year: '2019'
...
---
_id: '6023'
abstract:
- lang: eng
text: Multicellular development requires coordinated cell polarization relative
to body axes, and translation to oriented cell division 1–3 . In plants, it is
unknown how cell polarities are connected to organismal axes and translated to
division. Here, we identify Arabidopsis SOSEKI proteins that integrate apical–basal
and radial organismal axes to localize to polar cell edges. Localization does
not depend on tissue context, requires cell wall integrity and is defined by a
transferrable, protein-specific motif. A Domain of Unknown Function in SOSEKI
proteins resembles the DIX oligomerization domain in the animal Dishevelled polarity
regulator. The DIX-like domain self-interacts and is required for edge localization
and for influencing division orientation, together with a second domain that defines
the polar membrane domain. Our work shows that SOSEKI proteins locally interpret
global polarity cues and can influence cell division orientation. Furthermore,
this work reveals that, despite fundamental differences, cell polarity mechanisms
in plants and animals converge on a similar protein domain.
article_processing_charge: No
author:
- first_name: Saiko
full_name: Yoshida, Saiko
id: 2E46069C-F248-11E8-B48F-1D18A9856A87
last_name: Yoshida
- first_name: Alja
full_name: Van Der Schuren, Alja
last_name: Van Der Schuren
- first_name: Maritza
full_name: Van Dop, Maritza
last_name: Van Dop
- first_name: Luc
full_name: Van Galen, Luc
last_name: Van Galen
- first_name: Shunsuke
full_name: Saiga, Shunsuke
last_name: Saiga
- first_name: Milad
full_name: Adibi, Milad
last_name: Adibi
- first_name: Barbara
full_name: Möller, Barbara
last_name: Möller
- first_name: Colette A.
full_name: Ten Hove, Colette A.
last_name: Ten Hove
- first_name: Peter
full_name: Marhavy, Peter
id: 3F45B078-F248-11E8-B48F-1D18A9856A87
last_name: Marhavy
orcid: 0000-0001-5227-5741
- first_name: Richard
full_name: Smith, Richard
last_name: Smith
- first_name: Jiří
full_name: Friml, Jiří
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
- first_name: Dolf
full_name: Weijers, Dolf
last_name: Weijers
citation:
ama: Yoshida S, Van Der Schuren A, Van Dop M, et al. A SOSEKI-based coordinate system
interprets global polarity cues in arabidopsis. Nature Plants. 2019;5(2):160-166.
doi:10.1038/s41477-019-0363-6
apa: Yoshida, S., Van Der Schuren, A., Van Dop, M., Van Galen, L., Saiga, S., Adibi,
M., … Weijers, D. (2019). A SOSEKI-based coordinate system interprets global polarity
cues in arabidopsis. Nature Plants. Springer Nature. https://doi.org/10.1038/s41477-019-0363-6
chicago: Yoshida, Saiko, Alja Van Der Schuren, Maritza Van Dop, Luc Van Galen, Shunsuke
Saiga, Milad Adibi, Barbara Möller, et al. “A SOSEKI-Based Coordinate System Interprets
Global Polarity Cues in Arabidopsis.” Nature Plants. Springer Nature, 2019.
https://doi.org/10.1038/s41477-019-0363-6.
ieee: S. Yoshida et al., “A SOSEKI-based coordinate system interprets global
polarity cues in arabidopsis,” Nature Plants, vol. 5, no. 2. Springer Nature,
pp. 160–166, 2019.
ista: Yoshida S, Van Der Schuren A, Van Dop M, Van Galen L, Saiga S, Adibi M, Möller
B, Ten Hove CA, Marhavý P, Smith R, Friml J, Weijers D. 2019. A SOSEKI-based coordinate
system interprets global polarity cues in arabidopsis. Nature Plants. 5(2), 160–166.
mla: Yoshida, Saiko, et al. “A SOSEKI-Based Coordinate System Interprets Global
Polarity Cues in Arabidopsis.” Nature Plants, vol. 5, no. 2, Springer Nature,
2019, pp. 160–66, doi:10.1038/s41477-019-0363-6.
short: S. Yoshida, A. Van Der Schuren, M. Van Dop, L. Van Galen, S. Saiga, M. Adibi,
B. Möller, C.A. Ten Hove, P. Marhavý, R. Smith, J. Friml, D. Weijers, Nature Plants
5 (2019) 160–166.
date_created: 2019-02-17T22:59:21Z
date_published: 2019-02-08T00:00:00Z
date_updated: 2023-08-24T14:46:47Z
day: '08'
department:
- _id: JiFr
- _id: EvBe
doi: 10.1038/s41477-019-0363-6
ec_funded: 1
external_id:
isi:
- '000460479600014'
intvolume: ' 5'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://www.biorxiv.org/content/10.1101/479113v1.abstract
month: '02'
oa: 1
oa_version: Submitted Version
page: 160-166
project:
- _id: 25681D80-B435-11E9-9278-68D0E5697425
call_identifier: FP7
grant_number: '291734'
name: International IST Postdoc Fellowship Programme
publication: Nature Plants
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: A SOSEKI-based coordinate system interprets global polarity cues in arabidopsis
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 5
year: '2019'
...
---
_id: '6053'
abstract:
- lang: eng
text: Recent technical developments in the fields of quantum electromechanics and
optomechanics have spawned nanoscale mechanical transducers with the sensitivity
to measure mechanical displacements at the femtometre scale and the ability to
convert electromagnetic signals at the single photon level. A key challenge in
this field is obtaining strong coupling between motion and electromagnetic fields
without adding additional decoherence. Here we present an electromechanical transducer
that integrates a high-frequency (0.42 GHz) hypersonic phononic crystal with a
superconducting microwave circuit. The use of a phononic bandgap crystal enables
quantum-level transduction of hypersonic mechanical motion and concurrently eliminates
decoherence caused by acoustic radiation. Devices with hypersonic mechanical frequencies
provide a natural pathway for integration with Josephson junction quantum circuits,
a leading quantum computing technology, and nanophotonic systems capable of optical
networking and distributing quantum information.
article_processing_charge: No
article_type: original
author:
- first_name: Mahmoud
full_name: Kalaee, Mahmoud
last_name: Kalaee
- first_name: Mohammad
full_name: Mirhosseini, Mohammad
last_name: Mirhosseini
- first_name: Paul B.
full_name: Dieterle, Paul B.
last_name: Dieterle
- first_name: Matilda
full_name: Peruzzo, Matilda
id: 3F920B30-F248-11E8-B48F-1D18A9856A87
last_name: Peruzzo
orcid: 0000-0002-3415-4628
- first_name: Johannes M
full_name: Fink, Johannes M
id: 4B591CBA-F248-11E8-B48F-1D18A9856A87
last_name: Fink
orcid: 0000-0001-8112-028X
- first_name: Oskar
full_name: Painter, Oskar
last_name: Painter
citation:
ama: Kalaee M, Mirhosseini M, Dieterle PB, Peruzzo M, Fink JM, Painter O. Quantum
electromechanics of a hypersonic crystal. Nature Nanotechnology. 2019;14(4):334–339.
doi:10.1038/s41565-019-0377-2
apa: Kalaee, M., Mirhosseini, M., Dieterle, P. B., Peruzzo, M., Fink, J. M., &
Painter, O. (2019). Quantum electromechanics of a hypersonic crystal. Nature
Nanotechnology. Springer Nature. https://doi.org/10.1038/s41565-019-0377-2
chicago: Kalaee, Mahmoud, Mohammad Mirhosseini, Paul B. Dieterle, Matilda Peruzzo,
Johannes M Fink, and Oskar Painter. “Quantum Electromechanics of a Hypersonic
Crystal.” Nature Nanotechnology. Springer Nature, 2019. https://doi.org/10.1038/s41565-019-0377-2.
ieee: M. Kalaee, M. Mirhosseini, P. B. Dieterle, M. Peruzzo, J. M. Fink, and O.
Painter, “Quantum electromechanics of a hypersonic crystal,” Nature Nanotechnology,
vol. 14, no. 4. Springer Nature, pp. 334–339, 2019.
ista: Kalaee M, Mirhosseini M, Dieterle PB, Peruzzo M, Fink JM, Painter O. 2019.
Quantum electromechanics of a hypersonic crystal. Nature Nanotechnology. 14(4),
334–339.
mla: Kalaee, Mahmoud, et al. “Quantum Electromechanics of a Hypersonic Crystal.”
Nature Nanotechnology, vol. 14, no. 4, Springer Nature, 2019, pp. 334–339,
doi:10.1038/s41565-019-0377-2.
short: M. Kalaee, M. Mirhosseini, P.B. Dieterle, M. Peruzzo, J.M. Fink, O. Painter,
Nature Nanotechnology 14 (2019) 334–339.
date_created: 2019-02-24T22:59:21Z
date_published: 2019-04-01T00:00:00Z
date_updated: 2023-08-24T14:48:08Z
day: '01'
department:
- _id: JoFi
doi: 10.1038/s41565-019-0377-2
external_id:
isi:
- '000463195700014'
intvolume: ' 14'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://authors.library.caltech.edu/92123/
month: '04'
oa: 1
oa_version: Submitted Version
page: 334–339
publication: Nature Nanotechnology
publication_identifier:
eissn:
- 1748-3395
issn:
- 1748-3387
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Quantum electromechanics of a hypersonic crystal
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 14
year: '2019'
...
---
_id: '6050'
abstract:
- lang: eng
text: 'We answer a question of David Hilbert: given two circles it is not possible
in general to construct their centers using only a straightedge. On the other
hand, we give infinitely many families of pairs of circles for which such construction
is possible. '
article_processing_charge: No
author:
- first_name: Arseniy
full_name: Akopyan, Arseniy
id: 430D2C90-F248-11E8-B48F-1D18A9856A87
last_name: Akopyan
orcid: 0000-0002-2548-617X
- first_name: Roman
full_name: Fedorov, Roman
last_name: Fedorov
citation:
ama: Akopyan A, Fedorov R. Two circles and only a straightedge. Proceedings of
the American Mathematical Society. 2019;147:91-102. doi:10.1090/proc/14240
apa: Akopyan, A., & Fedorov, R. (2019). Two circles and only a straightedge.
Proceedings of the American Mathematical Society. AMS. https://doi.org/10.1090/proc/14240
chicago: Akopyan, Arseniy, and Roman Fedorov. “Two Circles and Only a Straightedge.”
Proceedings of the American Mathematical Society. AMS, 2019. https://doi.org/10.1090/proc/14240.
ieee: A. Akopyan and R. Fedorov, “Two circles and only a straightedge,” Proceedings
of the American Mathematical Society, vol. 147. AMS, pp. 91–102, 2019.
ista: Akopyan A, Fedorov R. 2019. Two circles and only a straightedge. Proceedings
of the American Mathematical Society. 147, 91–102.
mla: Akopyan, Arseniy, and Roman Fedorov. “Two Circles and Only a Straightedge.”
Proceedings of the American Mathematical Society, vol. 147, AMS, 2019,
pp. 91–102, doi:10.1090/proc/14240.
short: A. Akopyan, R. Fedorov, Proceedings of the American Mathematical Society
147 (2019) 91–102.
date_created: 2019-02-24T22:59:19Z
date_published: 2019-01-01T00:00:00Z
date_updated: 2023-08-24T14:48:59Z
day: '01'
department:
- _id: HeEd
doi: 10.1090/proc/14240
external_id:
arxiv:
- '1709.02562'
isi:
- '000450363900008'
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isi: 1
language:
- iso: eng
main_file_link:
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url: https://arxiv.org/abs/1709.02562
month: '01'
oa: 1
oa_version: Preprint
page: 91-102
publication: Proceedings of the American Mathematical Society
publication_status: published
publisher: AMS
quality_controlled: '1'
scopus_import: '1'
status: public
title: Two circles and only a straightedge
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 147
year: '2019'
...