---
_id: '2398'
abstract:
- lang: eng
text: We extend the mathematical theory of quantum hypothesis testing to the general
W*-algebraic setting and explore its relation with recent developments in non-equilibrium
quantum statistical mechanics. In particular, we relate the large deviation principle
for the full counting statistics of entropy flow to quantum hypothesis testing
of the arrow of time.
author:
- first_name: Vojkan
full_name: Jakšić, Vojkan
last_name: Jakšić
- first_name: Yoshiko
full_name: Ogata, Yoshiko
last_name: Ogata
- first_name: Claude
full_name: Pillet, Claude A
last_name: Pillet
- first_name: Robert
full_name: Robert Seiringer
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
citation:
ama: Jakšić V, Ogata Y, Pillet C, Seiringer R. Quantum hypothesis testing and non-equilibrium
statistical mechanics. Reviews in Mathematical Physics. 2012;24(6). doi:10.1142/S0129055X12300026
apa: Jakšić, V., Ogata, Y., Pillet, C., & Seiringer, R. (2012). Quantum hypothesis
testing and non-equilibrium statistical mechanics. Reviews in Mathematical
Physics. World Scientific Publishing. https://doi.org/10.1142/S0129055X12300026
chicago: Jakšić, Vojkan, Yoshiko Ogata, Claude Pillet, and Robert Seiringer. “Quantum
Hypothesis Testing and Non-Equilibrium Statistical Mechanics.” Reviews in Mathematical
Physics. World Scientific Publishing, 2012. https://doi.org/10.1142/S0129055X12300026.
ieee: V. Jakšić, Y. Ogata, C. Pillet, and R. Seiringer, “Quantum hypothesis testing
and non-equilibrium statistical mechanics,” Reviews in Mathematical Physics,
vol. 24, no. 6. World Scientific Publishing, 2012.
ista: Jakšić V, Ogata Y, Pillet C, Seiringer R. 2012. Quantum hypothesis testing
and non-equilibrium statistical mechanics. Reviews in Mathematical Physics. 24(6).
mla: Jakšić, Vojkan, et al. “Quantum Hypothesis Testing and Non-Equilibrium Statistical
Mechanics.” Reviews in Mathematical Physics, vol. 24, no. 6, World Scientific
Publishing, 2012, doi:10.1142/S0129055X12300026.
short: V. Jakšić, Y. Ogata, C. Pillet, R. Seiringer, Reviews in Mathematical Physics
24 (2012).
date_created: 2018-12-11T11:57:26Z
date_published: 2012-07-01T00:00:00Z
date_updated: 2020-07-14T12:45:40Z
day: '01'
doi: 10.1142/S0129055X12300026
extern: 1
intvolume: ' 24'
issue: '6'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1109.3804
month: '07'
oa: 1
publication: Reviews in Mathematical Physics
publication_status: published
publisher: World Scientific Publishing
publist_id: '4528'
quality_controlled: 0
status: public
title: Quantum hypothesis testing and non-equilibrium statistical mechanics
type: review
volume: 24
year: '2012'
...
---
_id: '2397'
abstract:
- lang: eng
text: We consider the low-density limit of a Fermi gas in the BCS approximation.
We show that if the interaction potential allows for a two-particle bound state,
the system at zero temperature is well approximated by the Gross-Pitaevskii functional,
describing a Bose-Einstein condensate of fermion pairs.
author:
- first_name: Christian
full_name: Hainzl, Christian
last_name: Hainzl
- first_name: Robert
full_name: Robert Seiringer
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
citation:
ama: Hainzl C, Seiringer R. Low density limit of BCS theory and Bose-Einstein condensation
of Fermion pairs. Letters in Mathematical Physics. 2012;100(2):119-138.
doi:10.1007/s11005-011-0535-4
apa: Hainzl, C., & Seiringer, R. (2012). Low density limit of BCS theory and
Bose-Einstein condensation of Fermion pairs. Letters in Mathematical Physics.
Springer. https://doi.org/10.1007/s11005-011-0535-4
chicago: Hainzl, Christian, and Robert Seiringer. “Low Density Limit of BCS Theory
and Bose-Einstein Condensation of Fermion Pairs.” Letters in Mathematical Physics.
Springer, 2012. https://doi.org/10.1007/s11005-011-0535-4.
ieee: C. Hainzl and R. Seiringer, “Low density limit of BCS theory and Bose-Einstein
condensation of Fermion pairs,” Letters in Mathematical Physics, vol. 100,
no. 2. Springer, pp. 119–138, 2012.
ista: Hainzl C, Seiringer R. 2012. Low density limit of BCS theory and Bose-Einstein
condensation of Fermion pairs. Letters in Mathematical Physics. 100(2), 119–138.
mla: Hainzl, Christian, and Robert Seiringer. “Low Density Limit of BCS Theory and
Bose-Einstein Condensation of Fermion Pairs.” Letters in Mathematical Physics,
vol. 100, no. 2, Springer, 2012, pp. 119–38, doi:10.1007/s11005-011-0535-4.
short: C. Hainzl, R. Seiringer, Letters in Mathematical Physics 100 (2012) 119–138.
date_created: 2018-12-11T11:57:25Z
date_published: 2012-05-01T00:00:00Z
date_updated: 2021-01-12T06:57:14Z
day: '01'
doi: 10.1007/s11005-011-0535-4
extern: 1
intvolume: ' 100'
issue: '2'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1105.1100
month: '05'
oa: 1
page: 119 - 138
publication: Letters in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '4530'
quality_controlled: 0
status: public
title: Low density limit of BCS theory and Bose-Einstein condensation of Fermion pairs
type: journal_article
volume: 100
year: '2012'
...
---
_id: '240'
abstract:
- lang: eng
text: We investigate the frequency of positive squareful numbers x, y, z≤B for which
x+y=z and present a conjecture concerning its asymptotic behavior.
acknowledgement: "EP/E053262/1\tEngineering and Physical Sciences Research Council"
author:
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: K Van
full_name: Valckenborgh, K Van
last_name: Valckenborgh
citation:
ama: Browning TD, Valckenborgh KV. Sums of three squareful numbers. Experimental
Mathematics. 2012;21(2):204-211. doi:10.1080/10586458.2011.605733
apa: Browning, T. D., & Valckenborgh, K. V. (2012). Sums of three squareful
numbers. Experimental Mathematics. Taylor & Francis. https://doi.org/10.1080/10586458.2011.605733
chicago: Browning, Timothy D, and K Van Valckenborgh. “Sums of Three Squareful Numbers.”
Experimental Mathematics. Taylor & Francis, 2012. https://doi.org/10.1080/10586458.2011.605733.
ieee: T. D. Browning and K. V. Valckenborgh, “Sums of three squareful numbers,”
Experimental Mathematics, vol. 21, no. 2. Taylor & Francis, pp. 204–211,
2012.
ista: Browning TD, Valckenborgh KV. 2012. Sums of three squareful numbers. Experimental
Mathematics. 21(2), 204–211.
mla: Browning, Timothy D., and K. Van Valckenborgh. “Sums of Three Squareful Numbers.”
Experimental Mathematics, vol. 21, no. 2, Taylor & Francis, 2012, pp.
204–11, doi:10.1080/10586458.2011.605733.
short: T.D. Browning, K.V. Valckenborgh, Experimental Mathematics 21 (2012) 204–211.
date_created: 2018-12-11T11:45:23Z
date_published: 2012-05-23T00:00:00Z
date_updated: 2021-01-12T06:57:15Z
day: '23'
doi: 10.1080/10586458.2011.605733
extern: 1
intvolume: ' 21'
issue: '2'
month: '05'
page: 204 - 211
publication: Experimental Mathematics
publication_status: published
publisher: Taylor & Francis
publist_id: '7664'
quality_controlled: 0
status: public
title: Sums of three squareful numbers
type: journal_article
volume: 21
year: '2012'
...
---
_id: '2400'
abstract:
- lang: eng
text: If the polaron coupling constant α is large enough, bipolarons or multi-polarons
will form. When passing through the critical α c from above, does the radius of
the system simply get arbitrarily large or does it reach a maximum and then explode?
We prove that it is always the latter. We also prove the analogous statement for
the Pekar-Tomasevich (PT) approximation to the energy, in which case there is
a solution to the PT equation at α c. Similarly, we show that the same phenomenon
occurs for atoms, e. g., helium, at the critical value of the nuclear charge.
Our proofs rely only on energy estimates, not on a detailed analysis of the Schrödinger
equation, and are very general. They use the fact that the Coulomb repulsion decays
like 1/r, while 'uncertainty principle' localization energies decay more rapidly,
as 1/r 2.
author:
- first_name: Rupert
full_name: Frank, Rupert L
last_name: Frank
- first_name: Élliott
full_name: Lieb, Élliott H
last_name: Lieb
- first_name: Robert
full_name: Robert Seiringer
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
citation:
ama: Frank R, Lieb É, Seiringer R. Binding of polarons and atoms at threshold. Communications
in Mathematical Physics. 2012;313(2):405-424. doi:10.1007/s00220-012-1436-9
apa: Frank, R., Lieb, É., & Seiringer, R. (2012). Binding of polarons and atoms
at threshold. Communications in Mathematical Physics. Springer. https://doi.org/10.1007/s00220-012-1436-9
chicago: Frank, Rupert, Élliott Lieb, and Robert Seiringer. “Binding of Polarons
and Atoms at Threshold.” Communications in Mathematical Physics. Springer,
2012. https://doi.org/10.1007/s00220-012-1436-9.
ieee: R. Frank, É. Lieb, and R. Seiringer, “Binding of polarons and atoms at threshold,”
Communications in Mathematical Physics, vol. 313, no. 2. Springer, pp.
405–424, 2012.
ista: Frank R, Lieb É, Seiringer R. 2012. Binding of polarons and atoms at threshold.
Communications in Mathematical Physics. 313(2), 405–424.
mla: Frank, Rupert, et al. “Binding of Polarons and Atoms at Threshold.” Communications
in Mathematical Physics, vol. 313, no. 2, Springer, 2012, pp. 405–24, doi:10.1007/s00220-012-1436-9.
short: R. Frank, É. Lieb, R. Seiringer, Communications in Mathematical Physics 313
(2012) 405–424.
date_created: 2018-12-11T11:57:27Z
date_published: 2012-07-01T00:00:00Z
date_updated: 2021-01-12T06:57:15Z
day: '01'
doi: 10.1007/s00220-012-1436-9
extern: 1
intvolume: ' 313'
issue: '2'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1106.0729
month: '07'
oa: 1
page: 405 - 424
publication: Communications in Mathematical Physics
publication_status: published
publisher: Springer
publist_id: '4527'
quality_controlled: 0
status: public
title: Binding of polarons and atoms at threshold
type: journal_article
volume: 313
year: '2012'
...
---
_id: '2403'
abstract:
- lang: eng
text: We study the effects of random scatterers on the ground state of the one-dimensional
Lieb-Liniger model of interacting bosons on the unit interval in the Gross-Pitaevskii
regime. We prove that Bose-Einstein condensation survives even a strong random
potential with a high density of scatterers. The character of the wavefunction
of the condensate, however, depends in an essential way on the interplay between
randomness and the strength of the two-body interaction. For low density of scatterers
and strong interactions the wavefunction extends over the whole interval. A high
density of scatterers and weak interactions, on the other hand, lead to localization
of the wavefunction in a fragmented subset of the interval.
author:
- first_name: Robert
full_name: Robert Seiringer
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
- first_name: Jakob
full_name: Yngvason, Jakob
last_name: Yngvason
- first_name: Valentin
full_name: Zagrebnov, Valentin A
last_name: Zagrebnov
citation:
ama: Seiringer R, Yngvason J, Zagrebnov V. Disordered Bose-Einstein condensates
with interaction in one dimension. Journal of Statistical Mechanics Theory
and Experiment. 2012;2012(11). doi:10.1088/1742-5468/2012/11/P11007
apa: Seiringer, R., Yngvason, J., & Zagrebnov, V. (2012). Disordered Bose-Einstein
condensates with interaction in one dimension. Journal of Statistical Mechanics
Theory and Experiment. IOP Publishing Ltd. https://doi.org/10.1088/1742-5468/2012/11/P11007
chicago: Seiringer, Robert, Jakob Yngvason, and Valentin Zagrebnov. “Disordered
Bose-Einstein Condensates with Interaction in One Dimension.” Journal of Statistical
Mechanics Theory and Experiment. IOP Publishing Ltd., 2012. https://doi.org/10.1088/1742-5468/2012/11/P11007.
ieee: R. Seiringer, J. Yngvason, and V. Zagrebnov, “Disordered Bose-Einstein condensates
with interaction in one dimension,” Journal of Statistical Mechanics Theory
and Experiment, vol. 2012, no. 11. IOP Publishing Ltd., 2012.
ista: Seiringer R, Yngvason J, Zagrebnov V. 2012. Disordered Bose-Einstein condensates
with interaction in one dimension. Journal of Statistical Mechanics Theory and
Experiment. 2012(11).
mla: Seiringer, Robert, et al. “Disordered Bose-Einstein Condensates with Interaction
in One Dimension.” Journal of Statistical Mechanics Theory and Experiment,
vol. 2012, no. 11, IOP Publishing Ltd., 2012, doi:10.1088/1742-5468/2012/11/P11007.
short: R. Seiringer, J. Yngvason, V. Zagrebnov, Journal of Statistical Mechanics
Theory and Experiment 2012 (2012).
date_created: 2018-12-11T11:57:28Z
date_published: 2012-11-01T00:00:00Z
date_updated: 2021-01-12T06:57:16Z
day: '01'
doi: 10.1088/1742-5468/2012/11/P11007
extern: 1
intvolume: ' 2012'
issue: '11'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1207.7054
month: '11'
oa: 1
publication: Journal of Statistical Mechanics Theory and Experiment
publication_status: published
publisher: IOP Publishing Ltd.
publist_id: '4523'
quality_controlled: 0
status: public
title: Disordered Bose-Einstein condensates with interaction in one dimension
type: journal_article
volume: 2012
year: '2012'
...
---
_id: '2402'
abstract:
- lang: eng
text: We consider a model of quantum-mechanical particles interacting via point
interactions of infinite scattering length. In the case of fermions we prove a
Lieb-Thirring inequality for the energy, i.e., we show that the energy is bounded
from below by a constant times the integral of the particle density to the power.
author:
- first_name: Rupert
full_name: Frank, Rupert L
last_name: Frank
- first_name: Robert
full_name: Robert Seiringer
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
citation:
ama: Frank R, Seiringer R. Lieb-Thirring inequality for a model of particles with
point interactions. Journal of Mathematical Physics. 2012;53(9). doi:10.1063/1.3697416
apa: Frank, R., & Seiringer, R. (2012). Lieb-Thirring inequality for a model
of particles with point interactions. Journal of Mathematical Physics.
American Institute of Physics. https://doi.org/10.1063/1.3697416
chicago: Frank, Rupert, and Robert Seiringer. “Lieb-Thirring Inequality for a Model
of Particles with Point Interactions.” Journal of Mathematical Physics.
American Institute of Physics, 2012. https://doi.org/10.1063/1.3697416.
ieee: R. Frank and R. Seiringer, “Lieb-Thirring inequality for a model of particles
with point interactions,” Journal of Mathematical Physics, vol. 53, no.
9. American Institute of Physics, 2012.
ista: Frank R, Seiringer R. 2012. Lieb-Thirring inequality for a model of particles
with point interactions. Journal of Mathematical Physics. 53(9).
mla: Frank, Rupert, and Robert Seiringer. “Lieb-Thirring Inequality for a Model
of Particles with Point Interactions.” Journal of Mathematical Physics,
vol. 53, no. 9, American Institute of Physics, 2012, doi:10.1063/1.3697416.
short: R. Frank, R. Seiringer, Journal of Mathematical Physics 53 (2012).
date_created: 2018-12-11T11:57:27Z
date_published: 2012-09-28T00:00:00Z
date_updated: 2021-01-12T06:57:16Z
day: '28'
doi: 10.1063/1.3697416
extern: 1
intvolume: ' 53'
issue: '9'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1112.5617
month: '09'
oa: 1
publication: Journal of Mathematical Physics
publication_status: published
publisher: American Institute of Physics
publist_id: '4524'
quality_controlled: 0
status: public
title: Lieb-Thirring inequality for a model of particles with point interactions
type: journal_article
volume: 53
year: '2012'
...
---
_id: '2401'
abstract:
- lang: eng
text: We find further implications of the BMV conjecture, which states that for
hermitian matrices B≥0 and A, the function λ {mapping} Tr exp(A - λB) is the Laplace
transform of a positive measure supported on [0,∞].
author:
- first_name: Élliott
full_name: Lieb, Élliott H
last_name: Lieb
- first_name: Robert
full_name: Robert Seiringer
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
citation:
ama: Lieb É, Seiringer R. Further implications of the Bessis-Moussa-Villani conjecture.
Journal of Statistical Physics. 2012;149(1):86-91. doi:10.1007/s10955-012-0585-8
apa: Lieb, É., & Seiringer, R. (2012). Further implications of the Bessis-Moussa-Villani
conjecture. Journal of Statistical Physics. Springer. https://doi.org/10.1007/s10955-012-0585-8
chicago: Lieb, Élliott, and Robert Seiringer. “Further Implications of the Bessis-Moussa-Villani
Conjecture.” Journal of Statistical Physics. Springer, 2012. https://doi.org/10.1007/s10955-012-0585-8.
ieee: É. Lieb and R. Seiringer, “Further implications of the Bessis-Moussa-Villani
conjecture,” Journal of Statistical Physics, vol. 149, no. 1. Springer,
pp. 86–91, 2012.
ista: Lieb É, Seiringer R. 2012. Further implications of the Bessis-Moussa-Villani
conjecture. Journal of Statistical Physics. 149(1), 86–91.
mla: Lieb, Élliott, and Robert Seiringer. “Further Implications of the Bessis-Moussa-Villani
Conjecture.” Journal of Statistical Physics, vol. 149, no. 1, Springer,
2012, pp. 86–91, doi:10.1007/s10955-012-0585-8.
short: É. Lieb, R. Seiringer, Journal of Statistical Physics 149 (2012) 86–91.
date_created: 2018-12-11T11:57:27Z
date_published: 2012-10-01T00:00:00Z
date_updated: 2021-01-12T06:57:16Z
day: '01'
doi: 10.1007/s10955-012-0585-8
extern: 1
intvolume: ' 149'
issue: '1'
main_file_link:
- open_access: '1'
url: http://arxiv.org/abs/1206.0460
month: '10'
oa: 1
page: 86 - 91
publication: Journal of Statistical Physics
publication_status: published
publisher: Springer
publist_id: '4525'
quality_controlled: 0
status: public
title: Further implications of the Bessis-Moussa-Villani conjecture
type: journal_article
volume: 149
year: '2012'
...
---
_id: '2411'
abstract:
- lang: eng
text: The kingdom of fungi provides model organisms for biotechnology, cell biology,
genetics, and life sciences in general. Only when their phylogenetic relationships
are stably resolved, can individual results from fungal research be integrated
into a holistic picture of biology. However, and despite recent progress, many
deep relationships within the fungi remain unclear. Here, we present the first
phylogenomic study of an entire eukaryotic kingdom that uses a consistency criterion
to strengthen phylogenetic conclusions. We reason that branches (splits) recovered
with independent data and different tree reconstruction methods are likely to
reflect true evolutionary relationships. Two complementary phylogenomic data sets
based on 99 fungal genomes and 109 fungal expressed sequence tag (EST) sets analyzed
with four different tree reconstruction methods shed light from different angles
on the fungal tree of life. Eleven additional data sets address specifically the
phylogenetic position of Blastocladiomycota, Ustilaginomycotina, and Dothideomycetes,
respectively. The combined evidence from the resulting trees supports the deep-level
stability of the fungal groups toward a comprehensive natural system of the fungi.
In addition, our analysis reveals methodologically interesting aspects. Enrichment
for EST encoded data-a common practice in phylogenomic analyses-introduces a strong
bias toward slowly evolving and functionally correlated genes. Consequently, the
generalization of phylogenomic data sets as collections of randomly selected genes
cannot be taken for granted. A thorough characterization of the data to assess
possible influences on the tree reconstruction should therefore become a standard
in phylogenomic analyses.
author:
- first_name: Ingo
full_name: Ebersberger, Ingo
last_name: Ebersberger
- first_name: Ricardo
full_name: De Matos Simoes, Ricardo
last_name: De Matos Simoes
- first_name: Anne
full_name: Kupczok, Anne
id: 2BB22BC2-F248-11E8-B48F-1D18A9856A87
last_name: Kupczok
- first_name: Matthias
full_name: Gube, Matthias
last_name: Gube
- first_name: Erika
full_name: Kothe, Erika
last_name: Kothe
- first_name: Kerstin
full_name: Voigt, Kerstin
last_name: Voigt
- first_name: Arndt
full_name: Von Haeseler, Arndt
last_name: Von Haeseler
citation:
ama: Ebersberger I, De Matos Simoes R, Kupczok A, et al. A consistent phylogenetic
backbone for the fungi. Molecular Biology and Evolution. 2012;29(5):1319-1334.
doi:10.1093/molbev/msr285
apa: Ebersberger, I., De Matos Simoes, R., Kupczok, A., Gube, M., Kothe, E., Voigt,
K., & Von Haeseler, A. (2012). A consistent phylogenetic backbone for the
fungi. Molecular Biology and Evolution. Oxford University Press. https://doi.org/10.1093/molbev/msr285
chicago: Ebersberger, Ingo, Ricardo De Matos Simoes, Anne Kupczok, Matthias Gube,
Erika Kothe, Kerstin Voigt, and Arndt Von Haeseler. “A Consistent Phylogenetic
Backbone for the Fungi.” Molecular Biology and Evolution. Oxford University
Press, 2012. https://doi.org/10.1093/molbev/msr285.
ieee: I. Ebersberger et al., “A consistent phylogenetic backbone for the
fungi,” Molecular Biology and Evolution, vol. 29, no. 5. Oxford University
Press, pp. 1319–1334, 2012.
ista: Ebersberger I, De Matos Simoes R, Kupczok A, Gube M, Kothe E, Voigt K, Von
Haeseler A. 2012. A consistent phylogenetic backbone for the fungi. Molecular
Biology and Evolution. 29(5), 1319–1334.
mla: Ebersberger, Ingo, et al. “A Consistent Phylogenetic Backbone for the Fungi.”
Molecular Biology and Evolution, vol. 29, no. 5, Oxford University Press,
2012, pp. 1319–34, doi:10.1093/molbev/msr285.
short: I. Ebersberger, R. De Matos Simoes, A. Kupczok, M. Gube, E. Kothe, K. Voigt,
A. Von Haeseler, Molecular Biology and Evolution 29 (2012) 1319–1334.
date_created: 2018-12-11T11:57:30Z
date_published: 2012-05-01T00:00:00Z
date_updated: 2021-01-12T06:57:19Z
day: '01'
ddc:
- '570'
- '576'
department:
- _id: JoBo
doi: 10.1093/molbev/msr285
file:
- access_level: open_access
checksum: d565dcac27d1736c0c378ea6fcf22d69
content_type: application/pdf
creator: system
date_created: 2018-12-12T10:13:30Z
date_updated: 2020-07-14T12:45:40Z
file_id: '5013'
file_name: IST-2015-384-v1+1_Mol_Biol_Evol-2012-Ebersberger-1319-34.pdf
file_size: 754922
relation: main_file
file_date_updated: 2020-07-14T12:45:40Z
has_accepted_license: '1'
intvolume: ' 29'
issue: '5'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
month: '05'
oa: 1
oa_version: Published Version
page: 1319 - 1334
publication: Molecular Biology and Evolution
publication_status: published
publisher: Oxford University Press
publist_id: '4515'
pubrep_id: '384'
quality_controlled: '1'
scopus_import: 1
status: public
title: A consistent phylogenetic backbone for the fungi
tmp:
image: /images/cc_by_nc.png
legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
short: CC BY-NC (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 29
year: '2012'
...
---
_id: '241'
abstract:
- lang: eng
text: The representation of integral binary forms as sums of two squares is discussed
and applied to establish the Manin conjecture for certain Châtelet surfaces over
ℚ.
author:
- first_name: Régis
full_name: de la Bretèche, Régis
last_name: De La Bretèche
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
citation:
ama: De La Bretèche R, Browning TD. Binary forms as sums of two squares and Châtelet
surfaces. Israel Journal of Mathematics. 2012;191(2):973-1012. doi:10.1007/s11856-012-0019-y
apa: De La Bretèche, R., & Browning, T. D. (2012). Binary forms as sums of two
squares and Châtelet surfaces. Israel Journal of Mathematics. Springer.
https://doi.org/10.1007/s11856-012-0019-y
chicago: De La Bretèche, Régis, and Timothy D Browning. “Binary Forms as Sums of
Two Squares and Châtelet Surfaces.” Israel Journal of Mathematics. Springer,
2012. https://doi.org/10.1007/s11856-012-0019-y.
ieee: R. De La Bretèche and T. D. Browning, “Binary forms as sums of two squares
and Châtelet surfaces,” Israel Journal of Mathematics, vol. 191, no. 2.
Springer, pp. 973–1012, 2012.
ista: De La Bretèche R, Browning TD. 2012. Binary forms as sums of two squares and
Châtelet surfaces. Israel Journal of Mathematics. 191(2), 973–1012.
mla: De La Bretèche, Régis, and Timothy D. Browning. “Binary Forms as Sums of Two
Squares and Châtelet Surfaces.” Israel Journal of Mathematics, vol. 191,
no. 2, Springer, 2012, pp. 973–1012, doi:10.1007/s11856-012-0019-y.
short: R. De La Bretèche, T.D. Browning, Israel Journal of Mathematics 191 (2012)
973–1012.
date_created: 2018-12-11T11:45:23Z
date_published: 2012-02-28T00:00:00Z
date_updated: 2021-01-12T06:57:19Z
day: '28'
doi: 10.1007/s11856-012-0019-y
extern: 1
intvolume: ' 191'
issue: '2'
month: '02'
page: 973 - 1012
publication: Israel Journal of Mathematics
publication_status: published
publisher: Springer
publist_id: '7663'
quality_controlled: 0
status: public
title: Binary forms as sums of two squares and Châtelet surfaces
type: journal_article
volume: 191
year: '2012'
...
---
_id: '242'
abstract:
- lang: eng
text: We investigate the first and second moments of shifted convolutions of the
generalized divisor function d 3(n).
acknowledgement: "EP/E053262/1\tEngineering and Physical Sciences Research Council"
author:
- first_name: Stephan
full_name: Baier, Stephan
last_name: Baier
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: Gihan
full_name: Marasingha, Gihan
last_name: Marasingha
- first_name: Liangyi
full_name: Zhao, Liangyi
last_name: Zhao
citation:
ama: Baier S, Browning TD, Marasingha G, Zhao L. Averages of shifted convolutions
of d3 (n). Proceedings of the Edinburgh Mathematical Society. 2012;55(3):551-576.
doi:10.1017/S001309151100037X
apa: Baier, S., Browning, T. D., Marasingha, G., & Zhao, L. (2012). Averages
of shifted convolutions of d3 (n). Proceedings of the Edinburgh Mathematical
Society. Cambridge University Press. https://doi.org/10.1017/S001309151100037X
chicago: Baier, Stephan, Timothy D Browning, Gihan Marasingha, and Liangyi Zhao.
“Averages of Shifted Convolutions of D3 (N).” Proceedings of the Edinburgh
Mathematical Society. Cambridge University Press, 2012. https://doi.org/10.1017/S001309151100037X.
ieee: S. Baier, T. D. Browning, G. Marasingha, and L. Zhao, “Averages of shifted
convolutions of d3 (n),” Proceedings of the Edinburgh Mathematical Society,
vol. 55, no. 3. Cambridge University Press, pp. 551–576, 2012.
ista: Baier S, Browning TD, Marasingha G, Zhao L. 2012. Averages of shifted convolutions
of d3 (n). Proceedings of the Edinburgh Mathematical Society. 55(3), 551–576.
mla: Baier, Stephan, et al. “Averages of Shifted Convolutions of D3 (N).” Proceedings
of the Edinburgh Mathematical Society, vol. 55, no. 3, Cambridge University
Press, 2012, pp. 551–76, doi:10.1017/S001309151100037X.
short: S. Baier, T.D. Browning, G. Marasingha, L. Zhao, Proceedings of the Edinburgh
Mathematical Society 55 (2012) 551–576.
date_created: 2018-12-11T11:45:23Z
date_published: 2012-10-01T00:00:00Z
date_updated: 2021-01-12T06:57:23Z
day: '01'
doi: 10.1017/S001309151100037X
extern: 1
intvolume: ' 55'
issue: '3'
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1101.5464
month: '10'
oa: 1
page: 551 - 576
publication: Proceedings of the Edinburgh Mathematical Society
publication_status: published
publisher: Cambridge University Press
publist_id: '7662'
quality_controlled: 0
status: public
title: Averages of shifted convolutions of d3 (n)
type: journal_article
volume: 55
year: '2012'
...
---
_id: '243'
abstract:
- lang: eng
text: Let P(t) ∈ ℚ[t] be an irreducible quadratic polynomial and suppose that K
is a quartic extension of ℚ containing the roots of P(t). Let N K/ℚ(X) be a full
norm form for the extension K/ℚ. We show that the variety P(t) =N K/ℚ(X)≠ 0 satisfies
the Hasse principle and weak approximation. The proof uses analytic methods.
author:
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: Roger
full_name: Heath-Brown, Roger
last_name: Heath Brown
citation:
ama: Browning TD, Heath Brown R. Quadratic polynomials represented by norm forms.
Geometric and Functional Analysis. 2012;22(5):1124-1190. doi:10.1007/s00039-012-0168-5
apa: Browning, T. D., & Heath Brown, R. (2012). Quadratic polynomials represented
by norm forms. Geometric and Functional Analysis. Springer Basel. https://doi.org/10.1007/s00039-012-0168-5
chicago: Browning, Timothy D, and Roger Heath Brown. “Quadratic Polynomials Represented
by Norm Forms.” Geometric and Functional Analysis. Springer Basel, 2012.
https://doi.org/10.1007/s00039-012-0168-5.
ieee: T. D. Browning and R. Heath Brown, “Quadratic polynomials represented by norm
forms,” Geometric and Functional Analysis, vol. 22, no. 5. Springer Basel,
pp. 1124–1190, 2012.
ista: Browning TD, Heath Brown R. 2012. Quadratic polynomials represented by norm
forms. Geometric and Functional Analysis. 22(5), 1124–1190.
mla: Browning, Timothy D., and Roger Heath Brown. “Quadratic Polynomials Represented
by Norm Forms.” Geometric and Functional Analysis, vol. 22, no. 5, Springer
Basel, 2012, pp. 1124–90, doi:10.1007/s00039-012-0168-5.
short: T.D. Browning, R. Heath Brown, Geometric and Functional Analysis 22 (2012)
1124–1190.
date_created: 2018-12-11T11:45:24Z
date_published: 2012-08-25T00:00:00Z
date_updated: 2021-01-12T06:57:26Z
day: '25'
doi: 10.1007/s00039-012-0168-5
extern: 1
intvolume: ' 22'
issue: '5'
month: '08'
page: 1124 - 1190
publication: Geometric and Functional Analysis
publication_status: published
publisher: Springer Basel
publist_id: '7661'
quality_controlled: 0
status: public
title: Quadratic polynomials represented by norm forms
type: journal_article
volume: 22
year: '2012'
...
---
_id: '2440'
abstract:
- lang: eng
text: We present an algorithm for computing [X, Y], i.e., all homotopy classes of
continuous maps X → Y, where X, Y are topological spaces given as finite simplicial
complexes, Y is (d - 1)-connected for some d ≥ 2 (for example, Y can be the d-dimensional
sphere S d), and dim X ≤ 2d - 2. These conditions on X, Y guarantee that [X, Y]
has a natural structure of a finitely generated Abelian group, and the algorithm
finds generators and relations for it. We combine several tools and ideas from
homotopy theory (such as Postnikov systems, simplicial sets, and obstruction theory)
with algorithmic tools from effective algebraic topology (objects with effective
homology). We hope that a further extension of the methods developed here will
yield an algorithm for computing, in some cases of interest, the ℤ 2-index, which
is a quantity playing a prominent role in Borsuk-Ulam style applications of topology
in combinatorics and geometry, e.g., in topological lower bounds for the chromatic
number of a graph. In a certain range of dimensions, deciding the embeddability
of a simplicial complex into ℝ d also amounts to a ℤ 2-index computation. This
is the main motivation of our work. We believe that investigating the computational
complexity of questions in homotopy theory and similar areas presents a fascinating
research area, and we hope that our work may help bridge the cultural gap between
algebraic topology and theoretical computer science.
author:
- first_name: Martin
full_name: Čadek, Martin
last_name: Čadek
- first_name: Marek
full_name: Marek Krcál
id: 33E21118-F248-11E8-B48F-1D18A9856A87
last_name: Krcál
- first_name: Jiří
full_name: Matoušek, Jiří
last_name: Matoušek
- first_name: Francis
full_name: Sergeraert, Francis
last_name: Sergeraert
- first_name: Lukáš
full_name: Vokřínek, Lukáš
last_name: Vokřínek
- first_name: Uli
full_name: Uli Wagner
id: 36690CA2-F248-11E8-B48F-1D18A9856A87
last_name: Wagner
orcid: 0000-0002-1494-0568
citation:
ama: 'Čadek M, Krcál M, Matoušek J, Sergeraert F, Vokřínek L, Wagner U. Computing
all maps into a sphere. In: SIAM; 2012:1-10.'
apa: 'Čadek, M., Krcál, M., Matoušek, J., Sergeraert, F., Vokřínek, L., & Wagner,
U. (2012). Computing all maps into a sphere (pp. 1–10). Presented at the SODA:
Symposium on Discrete Algorithms, SIAM.'
chicago: Čadek, Martin, Marek Krcál, Jiří Matoušek, Francis Sergeraert, Lukáš Vokřínek,
and Uli Wagner. “Computing All Maps into a Sphere,” 1–10. SIAM, 2012.
ieee: 'M. Čadek, M. Krcál, J. Matoušek, F. Sergeraert, L. Vokřínek, and U. Wagner,
“Computing all maps into a sphere,” presented at the SODA: Symposium on Discrete
Algorithms, 2012, pp. 1–10.'
ista: 'Čadek M, Krcál M, Matoušek J, Sergeraert F, Vokřínek L, Wagner U. 2012. Computing
all maps into a sphere. SODA: Symposium on Discrete Algorithms, 1–10.'
mla: Čadek, Martin, et al. Computing All Maps into a Sphere. SIAM, 2012,
pp. 1–10.
short: M. Čadek, M. Krcál, J. Matoušek, F. Sergeraert, L. Vokřínek, U. Wagner, in:,
SIAM, 2012, pp. 1–10.
conference:
name: 'SODA: Symposium on Discrete Algorithms'
date_created: 2018-12-11T11:57:40Z
date_published: 2012-01-01T00:00:00Z
date_updated: 2021-01-12T06:57:30Z
day: '01'
extern: 1
main_file_link:
- open_access: '0'
url: http://arxiv.org/abs/1105.6257
month: '01'
page: 1 - 10
publication_status: published
publisher: SIAM
publist_id: '4466'
quality_controlled: 0
status: public
title: Computing all maps into a sphere
type: conference
year: '2012'
...
---
_id: '2438'
abstract:
- lang: eng
text: The colored Tverberg theorem asserts that for eve;ry d and r there exists
t=t(d,r) such that for every set C ⊂ ℝ d of cardinality (d + 1)t, partitioned
into t-point subsets C 1, C 2,...,C d+1 (which we think of as color classes; e.
g., the points of C 1 are red, the points of C 2 blue, etc.), there exist r disjoint
sets R 1, R 2,...,R r⊆C that are rainbow, meaning that {pipe}R i∩C j{pipe}≤1 for
every i,j, and whose convex hulls all have a common point. All known proofs of
this theorem are topological. We present a geometric version of a recent beautiful
proof by Blagojević, Matschke, and Ziegler, avoiding a direct use of topological
methods. The purpose of this de-topologization is to make the proof more concrete
and intuitive, and accessible to a wider audience.
acknowledgement: 'We would like to thank Marek Krcál for useful discussions at initial
stages of this research. We also thank Günter M. Ziegler for valuable comments,
and Peter Landweber and two anonymous referees for detailed comments and corrections
that greatly helped to improve the presentation. In particular, we are indebted
to one of the referees for pointing out to us reference [19]. M. Tancer is supported
by the grants SVV-2010-261313 (Discrete Methods and Algorithms) and GAUK 49209.
U. Wagner’s research is supported by the Swiss National Science Foundation (SNF
Projects 200021- 125309 and 200020-125027). '
author:
- first_name: Jiří
full_name: Matoušek, Jiří
last_name: Matoušek
- first_name: Martin
full_name: Martin Tancer
id: 38AC689C-F248-11E8-B48F-1D18A9856A87
last_name: Tancer
orcid: 0000-0002-1191-6714
- first_name: Uli
full_name: Uli Wagner
id: 36690CA2-F248-11E8-B48F-1D18A9856A87
last_name: Wagner
orcid: 0000-0002-1494-0568
citation:
ama: Matoušek J, Tancer M, Wagner U. A geometric proof of the colored Tverberg theorem.
Discrete & Computational Geometry. 2012;47(2):245-265. doi:10.1007/s00454-011-9368-2
apa: Matoušek, J., Tancer, M., & Wagner, U. (2012). A geometric proof of the
colored Tverberg theorem. Discrete & Computational Geometry. Springer.
https://doi.org/10.1007/s00454-011-9368-2
chicago: Matoušek, Jiří, Martin Tancer, and Uli Wagner. “A Geometric Proof of the
Colored Tverberg Theorem.” Discrete & Computational Geometry. Springer,
2012. https://doi.org/10.1007/s00454-011-9368-2.
ieee: J. Matoušek, M. Tancer, and U. Wagner, “A geometric proof of the colored Tverberg
theorem,” Discrete & Computational Geometry, vol. 47, no. 2. Springer,
pp. 245–265, 2012.
ista: Matoušek J, Tancer M, Wagner U. 2012. A geometric proof of the colored Tverberg
theorem. Discrete & Computational Geometry. 47(2), 245–265.
mla: Matoušek, Jiří, et al. “A Geometric Proof of the Colored Tverberg Theorem.”
Discrete & Computational Geometry, vol. 47, no. 2, Springer, 2012,
pp. 245–65, doi:10.1007/s00454-011-9368-2.
short: J. Matoušek, M. Tancer, U. Wagner, Discrete & Computational Geometry
47 (2012) 245–265.
date_created: 2018-12-11T11:57:39Z
date_published: 2012-03-01T00:00:00Z
date_updated: 2021-01-12T06:57:29Z
day: '01'
doi: 10.1007/s00454-011-9368-2
extern: 1
intvolume: ' 47'
issue: '2'
month: '03'
page: 245 - 265
publication: Discrete & Computational Geometry
publication_status: published
publisher: Springer
publist_id: '4468'
quality_controlled: 0
status: public
title: A geometric proof of the colored Tverberg theorem
type: journal_article
volume: 47
year: '2012'
...
---
_id: '244'
abstract:
- lang: eng
text: We investigate the solubility of the congruence xy ≡ 1 (mod p), where p is
a prime and x, y are restricted to lie in suitable short intervals. Our work relies
on a mean value theorem for incomplete Kloosterman sums.
acknowledgement: "EP/E053262/1\tEngineering and Physical Sciences Research Council\tEPSRC,\nEP/J00149X/1\tEngineering
and Physical Sciences Research Council\tEPSRC\t"
author:
- first_name: Timothy D
full_name: Timothy Browning
id: 35827D50-F248-11E8-B48F-1D18A9856A87
last_name: Browning
orcid: 0000-0002-8314-0177
- first_name: Alan
full_name: Haynes, Alan K
last_name: Haynes
citation:
ama: Browning TD, Haynes A. Incomplete kloosterman sums and multiplicative inverses
in short intervals. International Journal of Number Theory. 2012;9(2):481-486.
doi: https://doi.org/10.1142/S1793042112501448
apa: Browning, T. D., & Haynes, A. (2012). Incomplete kloosterman sums and multiplicative
inverses in short intervals. International Journal of Number Theory. World
Scientific Publishing. https://doi.org/
https://doi.org/10.1142/S1793042112501448
chicago: Browning, Timothy D, and Alan Haynes. “Incomplete Kloosterman Sums and
Multiplicative Inverses in Short Intervals.” International Journal of Number
Theory. World Scientific Publishing, 2012. https://doi.org/
https://doi.org/10.1142/S1793042112501448.
ieee: T. D. Browning and A. Haynes, “Incomplete kloosterman sums and multiplicative
inverses in short intervals,” International Journal of Number Theory, vol.
9, no. 2. World Scientific Publishing, pp. 481–486, 2012.
ista: Browning TD, Haynes A. 2012. Incomplete kloosterman sums and multiplicative
inverses in short intervals. International Journal of Number Theory. 9(2), 481–486.
mla: Browning, Timothy D., and Alan Haynes. “Incomplete Kloosterman Sums and Multiplicative
Inverses in Short Intervals.” International Journal of Number Theory, vol.
9, no. 2, World Scientific Publishing, 2012, pp. 481–86, doi: https://doi.org/10.1142/S1793042112501448.
short: T.D. Browning, A. Haynes, International Journal of Number Theory 9 (2012)
481–486.
date_created: 2018-12-11T11:45:24Z
date_published: 2012-11-30T00:00:00Z
date_updated: 2021-01-12T06:57:30Z
day: '30'
doi: ' https://doi.org/10.1142/S1793042112501448'
extern: 1
intvolume: ' 9'
issue: '2'
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/1204.6374
month: '11'
oa: 1
page: 481 - 486
publication: International Journal of Number Theory
publication_status: published
publisher: World Scientific Publishing
publist_id: '7660'
quality_controlled: 0
status: public
title: Incomplete kloosterman sums and multiplicative inverses in short intervals
type: journal_article
volume: 9
year: '2012'
...
---
_id: '2439'
abstract:
- lang: eng
text: A Monte Carlo approximation algorithm for the Tukey depth problem in high
dimensions is introduced. The algorithm is a generalization of an algorithm presented
by Rousseeuw and Struyf (1998) . The performance of this algorithm is studied
both analytically and experimentally.
author:
- first_name: Dan
full_name: Chen, Dan
last_name: Chen
- first_name: Pat
full_name: Morin, Pat
last_name: Morin
- first_name: Uli
full_name: Uli Wagner
id: 36690CA2-F248-11E8-B48F-1D18A9856A87
last_name: Wagner
orcid: 0000-0002-1494-0568
citation:
ama: 'Chen D, Morin P, Wagner U. Absolute approximation of Tukey depth: Theory and
experiments. Computational Geometry: Theory and Applications. 2012;46(5):566-573.
doi:10.1016/j.comgeo.2012.03.001'
apa: 'Chen, D., Morin, P., & Wagner, U. (2012). Absolute approximation of Tukey
depth: Theory and experiments. Computational Geometry: Theory and Applications.
Elsevier. https://doi.org/10.1016/j.comgeo.2012.03.001'
chicago: 'Chen, Dan, Pat Morin, and Uli Wagner. “Absolute Approximation of Tukey
Depth: Theory and Experiments.” Computational Geometry: Theory and Applications.
Elsevier, 2012. https://doi.org/10.1016/j.comgeo.2012.03.001.'
ieee: 'D. Chen, P. Morin, and U. Wagner, “Absolute approximation of Tukey depth:
Theory and experiments,” Computational Geometry: Theory and Applications,
vol. 46, no. 5. Elsevier, pp. 566–573, 2012.'
ista: 'Chen D, Morin P, Wagner U. 2012. Absolute approximation of Tukey depth: Theory
and experiments. Computational Geometry: Theory and Applications. 46(5), 566–573.'
mla: 'Chen, Dan, et al. “Absolute Approximation of Tukey Depth: Theory and Experiments.”
Computational Geometry: Theory and Applications, vol. 46, no. 5, Elsevier,
2012, pp. 566–73, doi:10.1016/j.comgeo.2012.03.001.'
short: 'D. Chen, P. Morin, U. Wagner, Computational Geometry: Theory and Applications
46 (2012) 566–573.'
date_created: 2018-12-11T11:57:40Z
date_published: 2012-07-01T00:00:00Z
date_updated: 2021-01-12T06:57:29Z
day: '01'
doi: 10.1016/j.comgeo.2012.03.001
extern: 1
intvolume: ' 46'
issue: '5'
month: '07'
page: 566 - 573
publication: 'Computational Geometry: Theory and Applications'
publication_status: published
publisher: Elsevier
publist_id: '4467'
quality_controlled: 0
status: public
title: 'Absolute approximation of Tukey depth: Theory and experiments'
type: journal_article
volume: 46
year: '2012'
...
---
_id: '2441'
abstract:
- lang: eng
text: 'Eigenvalues associated to graphs are a well-studied subject. In particular
the spectra of the adjacency matrix and of the Laplacian of random graphs G(n,
p) are known quite precisely. We consider generalizations of these matrices to
simplicial complexes of higher dimensions and study their eigenvalues for the
Linial-Meshulam model X k(n, p) of random k-dimensional simplicial complexes on
n vertices. We show that for p = Ω(log n/n), the eigenvalues of both, the higher-dimensional
adjacency matrix and the Laplacian, are a.a.s. sharply concentrated around two
values. In a second part of the paper, we discuss a possible higherdimensional
analogue of the Discrete Cheeger Inequality. This fundamental inequality expresses
a close relationship between the eigenvalues of a graph and its combinatorial
expansion properties; in particular, spectral expansion (a large eigenvalue gap)
implies edge expansion. Recently, a higher-dimensional analogue of edge expansion
for simplicial complexes was introduced by Gromov, and independently by Linial,
Meshulam and Wallach and by Newman and Rabinovich. It is natural to ask whether
there is a higher-dimensional version of Cheeger''s inequality. We show that the
most straightforward version of a higher-dimensional Cheeger inequality fails:
for every k > 1, there is an infinite family of k-dimensional complexes that
are spectrally expanding (there is a large eigenvalue gap for the Laplacian) but
not combinatorially expanding.'
author:
- first_name: Anna
full_name: Gundert, Anna
last_name: Gundert
- first_name: Uli
full_name: Uli Wagner
id: 36690CA2-F248-11E8-B48F-1D18A9856A87
last_name: Wagner
orcid: 0000-0002-1494-0568
citation:
ama: 'Gundert A, Wagner U. On Laplacians of random complexes. In: ACM; 2012:151-160.
doi:10.1145/2261250.2261272'
apa: 'Gundert, A., & Wagner, U. (2012). On Laplacians of random complexes (pp.
151–160). Presented at the SGC: Symposuim on Computational Geometry, ACM. https://doi.org/10.1145/2261250.2261272'
chicago: Gundert, Anna, and Uli Wagner. “On Laplacians of Random Complexes,” 151–60.
ACM, 2012. https://doi.org/10.1145/2261250.2261272.
ieee: 'A. Gundert and U. Wagner, “On Laplacians of random complexes,” presented
at the SGC: Symposuim on Computational Geometry, 2012, pp. 151–160.'
ista: 'Gundert A, Wagner U. 2012. On Laplacians of random complexes. SGC: Symposuim
on Computational Geometry, 151–160.'
mla: Gundert, Anna, and Uli Wagner. On Laplacians of Random Complexes. ACM,
2012, pp. 151–60, doi:10.1145/2261250.2261272.
short: A. Gundert, U. Wagner, in:, ACM, 2012, pp. 151–160.
conference:
name: 'SGC: Symposuim on Computational Geometry'
date_created: 2018-12-11T11:57:41Z
date_published: 2012-06-01T00:00:00Z
date_updated: 2021-01-12T06:57:30Z
day: '01'
doi: 10.1145/2261250.2261272
extern: 1
month: '06'
page: 151 - 160
publication_status: published
publisher: ACM
publist_id: '4464'
quality_controlled: 0
status: public
title: On Laplacians of random complexes
type: conference
year: '2012'
...
---
_id: '2453'
abstract:
- lang: eng
text: Constitutive endocytic recycling is a crucial mechanism allowing regulation
of the activity of proteins at the plasma membrane and for rapid changes in their
localization, as demonstrated in plants for PIN-FORMED (PIN) proteins, the auxin
transporters. To identify novel molecular components of endocytic recycling, mainly
exocytosis, we designed a PIN1-green fluorescent protein fluorescence imaging-based
forward genetic screen for Arabidopsis thaliana mutants that showed increased
intracellular accumulation of cargos in response to the trafficking inhibitor
brefeldin A (BFA). We identified bex5 (for BFA-visualized exocytic trafficking
defective), a novel dominant mutant carrying a missense mutation that disrupts
a conserved sequence motif of the small GTPase, RAS GENES FROM RAT BRAINA1b. bex5
displays defects such as enhanced protein accumulation in abnormal BFA compartments,
aberrant endosomes, and defective exocytosis and transcytosis. BEX5/RabA1b localizes
to trans-Golgi network/early endosomes (TGN/EE) and acts on distinct trafficking
processes like those regulated by GTP exchange factors on ADP-ribosylation factors
GNOM-LIKE1 and HOPM INTERACTOR7/BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1,
which regulate trafficking at the Golgi apparatus and TGN/EE, respectively. All
together, this study identifies Arabidopsis BEX5/RabA1b as a novel regulator of
protein trafficking from a TGN/EE compartment to the plasma membrane.
author:
- first_name: Elena
full_name: Feraru, Elena
last_name: Feraru
- first_name: Mugurel
full_name: Feraru, Mugurel Ioan
last_name: Feraru
- first_name: Rin
full_name: Asaoka, Rin
last_name: Asaoka
- first_name: Tomasz
full_name: Paciorek, Tomasz
last_name: Paciorek
- first_name: Riet
full_name: De Rycke, Riet M
last_name: De Rycke
- first_name: Hirokazu
full_name: Tanaka, Hirokazu
last_name: Tanaka
- first_name: Akihiko
full_name: Nakano, Akihiko
last_name: Nakano
- first_name: Jirí
full_name: Jirí Friml
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Feraru E, Feraru M, Asaoka R, et al. BEX5/RabA1b regulates trans-Golgi network-to-plasma
membrane protein trafficking in Arabidopsis. Plant Cell. 2012;24(7):3074-3086.
doi:10.1105/tpc.112.098152
apa: Feraru, E., Feraru, M., Asaoka, R., Paciorek, T., De Rycke, R., Tanaka, H.,
… Friml, J. (2012). BEX5/RabA1b regulates trans-Golgi network-to-plasma membrane
protein trafficking in Arabidopsis. Plant Cell. American Society of Plant
Biologists. https://doi.org/10.1105/tpc.112.098152
chicago: Feraru, Elena, Mugurel Feraru, Rin Asaoka, Tomasz Paciorek, Riet De Rycke,
Hirokazu Tanaka, Akihiko Nakano, and Jiří Friml. “BEX5/RabA1b Regulates Trans-Golgi
Network-to-Plasma Membrane Protein Trafficking in Arabidopsis.” Plant Cell.
American Society of Plant Biologists, 2012. https://doi.org/10.1105/tpc.112.098152.
ieee: E. Feraru et al., “BEX5/RabA1b regulates trans-Golgi network-to-plasma
membrane protein trafficking in Arabidopsis,” Plant Cell, vol. 24, no.
7. American Society of Plant Biologists, pp. 3074–3086, 2012.
ista: Feraru E, Feraru M, Asaoka R, Paciorek T, De Rycke R, Tanaka H, Nakano A,
Friml J. 2012. BEX5/RabA1b regulates trans-Golgi network-to-plasma membrane protein
trafficking in Arabidopsis. Plant Cell. 24(7), 3074–3086.
mla: Feraru, Elena, et al. “BEX5/RabA1b Regulates Trans-Golgi Network-to-Plasma
Membrane Protein Trafficking in Arabidopsis.” Plant Cell, vol. 24, no.
7, American Society of Plant Biologists, 2012, pp. 3074–86, doi:10.1105/tpc.112.098152.
short: E. Feraru, M. Feraru, R. Asaoka, T. Paciorek, R. De Rycke, H. Tanaka, A.
Nakano, J. Friml, Plant Cell 24 (2012) 3074–3086.
date_created: 2018-12-11T11:57:45Z
date_published: 2012-07-01T00:00:00Z
date_updated: 2021-01-12T06:57:35Z
day: '01'
doi: 10.1105/tpc.112.098152
extern: 1
intvolume: ' 24'
issue: '7'
month: '07'
page: 3074 - 3086
publication: Plant Cell
publication_status: published
publisher: American Society of Plant Biologists
publist_id: '4450'
quality_controlled: 0
status: public
title: BEX5/RabA1b regulates trans-Golgi network-to-plasma membrane protein trafficking
in Arabidopsis
type: journal_article
volume: 24
year: '2012'
...
---
_id: '2456'
abstract:
- lang: eng
text: The third EMBO Conference on Plant Molecular Biology, which focused on ‘Plant
development and environmental interactions’,was held in May 2012 in Matera, Italy.
Here, we review some of the topics and themes that emerged from the various
contributions; namely, steering technologies, transcriptional networks and hormonal
regulation, small RNAs, cell and tissue polarity, environmental control and natural
variation. We intend to provide the reader who might have missed this remarkable
event with a glimpse of the recent progress made in this blossoming research field.
author:
- first_name: Tom
full_name: Beeckman, Tom
last_name: Beeckman
- first_name: Jirí
full_name: Friml, Jirí
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Beeckman T, Friml J. Plant developmental biologists meet on stairways in Matera.
Development. 2012;139(20):3677-3682. doi:10.1242/dev.080861
apa: Beeckman, T., & Friml, J. (2012). Plant developmental biologists meet on
stairways in Matera. Development. Company of Biologists. https://doi.org/10.1242/dev.080861
chicago: Beeckman, Tom, and Jiří Friml. “Plant Developmental Biologists Meet on
Stairways in Matera.” Development. Company of Biologists, 2012. https://doi.org/10.1242/dev.080861.
ieee: T. Beeckman and J. Friml, “Plant developmental biologists meet on stairways
in Matera,” Development, vol. 139, no. 20. Company of Biologists, pp. 3677–3682,
2012.
ista: Beeckman T, Friml J. 2012. Plant developmental biologists meet on stairways
in Matera. Development. 139(20), 3677–3682.
mla: Beeckman, Tom, and Jiří Friml. “Plant Developmental Biologists Meet on Stairways
in Matera.” Development, vol. 139, no. 20, Company of Biologists, 2012,
pp. 3677–82, doi:10.1242/dev.080861.
short: T. Beeckman, J. Friml, Development 139 (2012) 3677–3682.
date_created: 2018-12-11T11:57:46Z
date_published: 2012-10-15T00:00:00Z
date_updated: 2021-01-12T06:57:35Z
day: '15'
doi: 10.1242/dev.080861
extern: '1'
intvolume: ' 139'
issue: '20'
language:
- iso: eng
month: '10'
oa_version: None
page: 3677 - 3682
publication: Development
publication_status: published
publisher: Company of Biologists
publist_id: '4447'
quality_controlled: '1'
status: public
title: Plant developmental biologists meet on stairways in Matera
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 139
year: '2012'
...
---
_id: '2459'
abstract:
- lang: eng
text: Coordinated, subcellular trafficking of proteins is one of the fundamental
properties of the multicellular eukaryotic organisms. Trafficking involves a large
diversity of compartments, pathways, cargo molecules, and vesicle-sorting events.
It is also crucial in regulating the localization and, thus, the activity of various
proteins, but the process is still poorly genetically defined in plants. In the
past, forward genetics screens had been used to determine the function of genes
by searching for a specific morphological phenotype in the organism population
in which mutations had been induced chemically or by irradiation. Unfortunately,
these straightforward genetic screens turned out to be limited in identifying
new regulators of intracellular protein transport, because mutations affecting
essential trafficking pathways often lead to lethality. In addition, the use of
these approaches has been restricted by functional redundancy among trafficking
regulators. Screens for mutants that rely on the observation of changes in the
cellular localization or dynamics of fluorescent subcellular markers enable, at
least partially, to circumvent these issues. Hence, such image-based screens provide
the possibility to identify either alleles with weak effects or components of
the subcellular trafficking machinery that have no strong impact on the plant
growth.
article_number: '97'
author:
- first_name: Marta
full_name: Zwiewka, Marta
last_name: Zwiewka
- first_name: Jirí
full_name: Friml, Jirí
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Zwiewka M, Friml J. Fluorescence imaging-based forward genetic screens to identify
trafficking regulators in plants. Frontiers in Plant Science. 2012;3(May).
doi:10.3389/fpls.2012.00097
apa: Zwiewka, M., & Friml, J. (2012). Fluorescence imaging-based forward genetic
screens to identify trafficking regulators in plants. Frontiers in Plant Science.
Frontiers Research Foundation. https://doi.org/10.3389/fpls.2012.00097
chicago: Zwiewka, Marta, and Jiří Friml. “Fluorescence Imaging-Based Forward Genetic
Screens to Identify Trafficking Regulators in Plants.” Frontiers in Plant Science.
Frontiers Research Foundation, 2012. https://doi.org/10.3389/fpls.2012.00097.
ieee: M. Zwiewka and J. Friml, “Fluorescence imaging-based forward genetic screens
to identify trafficking regulators in plants,” Frontiers in Plant Science,
vol. 3, no. May. Frontiers Research Foundation, 2012.
ista: Zwiewka M, Friml J. 2012. Fluorescence imaging-based forward genetic screens
to identify trafficking regulators in plants. Frontiers in Plant Science. 3(May),
97.
mla: Zwiewka, Marta, and Jiří Friml. “Fluorescence Imaging-Based Forward Genetic
Screens to Identify Trafficking Regulators in Plants.” Frontiers in Plant Science,
vol. 3, no. May, 97, Frontiers Research Foundation, 2012, doi:10.3389/fpls.2012.00097.
short: M. Zwiewka, J. Friml, Frontiers in Plant Science 3 (2012).
date_created: 2018-12-11T11:57:47Z
date_published: 2012-05-24T00:00:00Z
date_updated: 2021-01-12T06:57:36Z
day: '24'
ddc:
- '580'
doi: 10.3389/fpls.2012.00097
extern: '1'
file:
- access_level: open_access
checksum: ab4e9487ccdb83a7a0a9ee6811521844
content_type: application/pdf
creator: kschuh
date_created: 2019-04-26T06:49:26Z
date_updated: 2020-07-14T12:45:41Z
file_id: '6346'
file_name: 2012_frontiers_Zwiewka.pdf
file_size: 1468230
relation: main_file
file_date_updated: 2020-07-14T12:45:41Z
has_accepted_license: '1'
intvolume: ' 3'
issue: May
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
publication: Frontiers in Plant Science
publication_status: published
publisher: Frontiers Research Foundation
publist_id: '4444'
quality_controlled: '1'
status: public
title: Fluorescence imaging-based forward genetic screens to identify trafficking
regulators in plants
tmp:
image: /images/cc_by_nc.png
legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
short: CC BY-NC (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 3
year: '2012'
...
---
_id: '2458'
abstract:
- lang: eng
text: Initiation and successive development of organs induce mechanical stresses
at the cellular level. Using the tomato shoot apex, a new study now proposes that
mechanical strain regulates the plasma membrane abundance of the PIN1 auxin transporter,
thereby reinforcing a positive feed-back loop between growth and auxin accumulation.
author:
- first_name: Hongjiang
full_name: Li, Hongjiang
id: 33CA54A6-F248-11E8-B48F-1D18A9856A87
last_name: Li
orcid: 0000-0001-5039-9660
- first_name: Jirí
full_name: Friml, Jirí
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
- first_name: Wim
full_name: Grunewald, Wim
last_name: Grunewald
citation:
ama: 'Li H, Friml J, Grunewald W. Cell polarity: Stretching prevents developmental
cramps. Current Biology. 2012;22(16):R635-R637. doi:10.1016/j.cub.2012.06.053'
apa: 'Li, H., Friml, J., & Grunewald, W. (2012). Cell polarity: Stretching prevents
developmental cramps. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2012.06.053'
chicago: 'Li, Hongjiang, Jiří Friml, and Wim Grunewald. “Cell Polarity: Stretching
Prevents Developmental Cramps.” Current Biology. Cell Press, 2012. https://doi.org/10.1016/j.cub.2012.06.053.'
ieee: 'H. Li, J. Friml, and W. Grunewald, “Cell polarity: Stretching prevents developmental
cramps,” Current Biology, vol. 22, no. 16. Cell Press, pp. R635–R637, 2012.'
ista: 'Li H, Friml J, Grunewald W. 2012. Cell polarity: Stretching prevents developmental
cramps. Current Biology. 22(16), R635–R637.'
mla: 'Li, Hongjiang, et al. “Cell Polarity: Stretching Prevents Developmental Cramps.”
Current Biology, vol. 22, no. 16, Cell Press, 2012, pp. R635–37, doi:10.1016/j.cub.2012.06.053.'
short: H. Li, J. Friml, W. Grunewald, Current Biology 22 (2012) R635–R637.
date_created: 2018-12-11T11:57:47Z
date_published: 2012-08-21T00:00:00Z
date_updated: 2021-01-12T06:57:36Z
day: '21'
doi: 10.1016/j.cub.2012.06.053
extern: '1'
intvolume: ' 22'
issue: '16'
language:
- iso: eng
month: '08'
oa_version: None
page: R635 - R637
publication: Current Biology
publication_status: published
publisher: Cell Press
publist_id: '4445'
quality_controlled: '1'
status: public
title: 'Cell polarity: Stretching prevents developmental cramps'
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 22
year: '2012'
...