[{"publication_status":"published","publisher":"Springer","department":[{"_id":"KrPi"}],"year":"2017","date_created":"2018-12-11T11:50:37Z","date_updated":"2023-09-20T11:20:58Z","volume":30,"author":[{"last_name":"Kiltz","first_name":"Eike","full_name":"Kiltz, Eike"},{"full_name":"Pietrzak, Krzysztof Z","last_name":"Pietrzak","first_name":"Krzysztof Z","orcid":"0000-0002-9139-1654","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Venturi","first_name":"Daniele","full_name":"Venturi, Daniele"},{"full_name":"Cash, David","last_name":"Cash","first_name":"David"},{"full_name":"Jain, Abhishek","last_name":"Jain","first_name":"Abhishek"}],"related_material":{"record":[{"id":"3238","status":"public","relation":"earlier_version"}]},"file_date_updated":"2020-07-14T12:44:37Z","ec_funded":1,"publist_id":"6166","isi":1,"quality_controlled":"1","project":[{"call_identifier":"H2020","name":"Teaching Old Crypto New Tricks","_id":"258AA5B2-B435-11E9-9278-68D0E5697425","grant_number":"682815"},{"name":"Provable Security for Physical Cryptography","call_identifier":"FP7","_id":"258C570E-B435-11E9-9278-68D0E5697425","grant_number":"259668"}],"oa":1,"external_id":{"isi":["000410788600007"]},"language":[{"iso":"eng"}],"doi":"10.1007/s00145-016-9247-3","month":"10","ddc":["000"],"title":"Efficient authentication from hard learning problems","status":"public","intvolume":" 30","_id":"1187","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa_version":"Submitted Version","file":[{"access_level":"open_access","file_name":"2017_JournalCrypto_Kiltz.pdf","creator":"dernst","file_size":516959,"content_type":"application/pdf","file_id":"7843","relation":"main_file","checksum":"c647520d115b772a1682fc06fa273eb1","date_updated":"2020-07-14T12:44:37Z","date_created":"2020-05-14T16:30:17Z"}],"type":"journal_article","abstract":[{"text":"We construct efficient authentication protocols and message authentication codes (MACs) whose security can be reduced to the learning parity with noise (LPN) problem. Despite a large body of work—starting with the (Formula presented.) protocol of Hopper and Blum in 2001—until now it was not even known how to construct an efficient authentication protocol from LPN which is secure against man-in-the-middle attacks. A MAC implies such a (two-round) protocol.","lang":"eng"}],"issue":"4","article_type":"original","page":"1238 - 1275","publication":"Journal of Cryptology","citation":{"apa":"Kiltz, E., Pietrzak, K. Z., Venturi, D., Cash, D., & Jain, A. (2017). Efficient authentication from hard learning problems. Journal of Cryptology. Springer. https://doi.org/10.1007/s00145-016-9247-3","ieee":"E. Kiltz, K. Z. Pietrzak, D. Venturi, D. Cash, and A. Jain, “Efficient authentication from hard learning problems,” Journal of Cryptology, vol. 30, no. 4. Springer, pp. 1238–1275, 2017.","ista":"Kiltz E, Pietrzak KZ, Venturi D, Cash D, Jain A. 2017. Efficient authentication from hard learning problems. Journal of Cryptology. 30(4), 1238–1275.","ama":"Kiltz E, Pietrzak KZ, Venturi D, Cash D, Jain A. Efficient authentication from hard learning problems. Journal of Cryptology. 2017;30(4):1238-1275. doi:10.1007/s00145-016-9247-3","chicago":"Kiltz, Eike, Krzysztof Z Pietrzak, Daniele Venturi, David Cash, and Abhishek Jain. “Efficient Authentication from Hard Learning Problems.” Journal of Cryptology. Springer, 2017. https://doi.org/10.1007/s00145-016-9247-3.","short":"E. Kiltz, K.Z. Pietrzak, D. Venturi, D. Cash, A. Jain, Journal of Cryptology 30 (2017) 1238–1275.","mla":"Kiltz, Eike, et al. “Efficient Authentication from Hard Learning Problems.” Journal of Cryptology, vol. 30, no. 4, Springer, 2017, pp. 1238–75, doi:10.1007/s00145-016-9247-3."},"date_published":"2017-10-01T00:00:00Z","scopus_import":"1","day":"01","has_accepted_license":"1","article_processing_charge":"No"},{"article_processing_charge":"No","day":"01","date_published":"2017-01-01T00:00:00Z","page":"307 - 326","citation":{"short":"A. Kazda, V. Kolmogorov, M. Rolinek, in:, SIAM, 2017, pp. 307–326.","mla":"Kazda, Alexandr, et al. Even Delta-Matroids and the Complexity of Planar Boolean CSPs. SIAM, 2017, pp. 307–26, doi:10.1137/1.9781611974782.20.","chicago":"Kazda, Alexandr, Vladimir Kolmogorov, and Michal Rolinek. “Even Delta-Matroids and the Complexity of Planar Boolean CSPs,” 307–26. SIAM, 2017. https://doi.org/10.1137/1.9781611974782.20.","ama":"Kazda A, Kolmogorov V, Rolinek M. Even delta-matroids and the complexity of planar Boolean CSPs. In: SIAM; 2017:307-326. doi:10.1137/1.9781611974782.20","ieee":"A. Kazda, V. Kolmogorov, and M. Rolinek, “Even delta-matroids and the complexity of planar Boolean CSPs,” presented at the SODA: Symposium on Discrete Algorithms, Barcelona, Spain, 2017, pp. 307–326.","apa":"Kazda, A., Kolmogorov, V., & Rolinek, M. (2017). Even delta-matroids and the complexity of planar Boolean CSPs (pp. 307–326). Presented at the SODA: Symposium on Discrete Algorithms, Barcelona, Spain: SIAM. https://doi.org/10.1137/1.9781611974782.20","ista":"Kazda A, Kolmogorov V, Rolinek M. 2017. Even delta-matroids and the complexity of planar Boolean CSPs. SODA: Symposium on Discrete Algorithms, 307–326."},"abstract":[{"lang":"eng","text":"The main result of this paper is a generalization of the classical blossom algorithm for finding perfect matchings. Our algorithm can efficiently solve Boolean CSPs where each variable appears in exactly two constraints (we call it edge CSP) and all constraints are even Δ-matroid relations (represented by lists of tuples). As a consequence of this, we settle the complexity classification of planar Boolean CSPs started by Dvorak and Kupec. Knowing that edge CSP is tractable for even Δ-matroid constraints allows us to extend the tractability result to a larger class of Δ-matroids that includes many classes that were known to be tractable before, namely co-independent, compact, local and binary."}],"type":"conference","oa_version":"Submitted Version","title":"Even delta-matroids and the complexity of planar Boolean CSPs","status":"public","_id":"1192","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","publication_identifier":{"isbn":["978-161197478-2"]},"month":"01","language":[{"iso":"eng"}],"doi":"10.1137/1.9781611974782.20","conference":{"name":"SODA: Symposium on Discrete Algorithms","end_date":"2017-01019","location":"Barcelona, Spain","start_date":"2017-01-16"},"project":[{"name":"Discrete Optimization in Computer Vision: Theory and Practice","call_identifier":"FP7","_id":"25FBA906-B435-11E9-9278-68D0E5697425","grant_number":"616160"}],"isi":1,"quality_controlled":"1","main_file_link":[{"url":"https://arxiv.org/abs/1602.03124","open_access":"1"}],"external_id":{"isi":["000426965800020"]},"oa":1,"publist_id":"6159","ec_funded":1,"date_updated":"2023-09-20T11:20:26Z","date_created":"2018-12-11T11:50:38Z","related_material":{"record":[{"id":"6032","relation":"later_version","status":"public"}]},"author":[{"last_name":"Kazda","first_name":"Alexandr","id":"3B32BAA8-F248-11E8-B48F-1D18A9856A87","full_name":"Kazda, Alexandr"},{"first_name":"Vladimir","last_name":"Kolmogorov","id":"3D50B0BA-F248-11E8-B48F-1D18A9856A87","full_name":"Kolmogorov, Vladimir"},{"id":"3CB3BC06-F248-11E8-B48F-1D18A9856A87","last_name":"Rolinek","first_name":"Michal","full_name":"Rolinek, Michal"}],"publisher":"SIAM","department":[{"_id":"VlKo"}],"publication_status":"published","year":"2017"},{"abstract":[{"lang":"eng","text":"In this article we define an algebraic vertex of a generalized polyhedron and show that the set of algebraic vertices is the smallest set of points needed to define the polyhedron. We prove that the indicator function of a generalized polytope P is a linear combination of indicator functions of simplices whose vertices are algebraic vertices of P. We also show that the indicator function of any generalized polyhedron is a linear combination, with integer coefficients, of indicator functions of cones with apices at algebraic vertices and line-cones. The concept of an algebraic vertex is closely related to the Fourier–Laplace transform. We show that a point v is an algebraic vertex of a generalized polyhedron P if and only if the tangent cone of P, at v, has non-zero Fourier–Laplace transform."}],"type":"journal_article","oa_version":"Submitted Version","status":"public","title":"Algebraic vertices of non-convex polyhedra","intvolume":" 308","_id":"1180","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","day":"21","article_processing_charge":"No","scopus_import":"1","date_published":"2017-02-21T00:00:00Z","page":"627 - 644","publication":"Advances in Mathematics","citation":{"chicago":"Akopyan, Arseniy, Imre Bárány, and Sinai Robins. “Algebraic Vertices of Non-Convex Polyhedra.” Advances in Mathematics. Academic Press, 2017. https://doi.org/10.1016/j.aim.2016.12.026.","mla":"Akopyan, Arseniy, et al. “Algebraic Vertices of Non-Convex Polyhedra.” Advances in Mathematics, vol. 308, Academic Press, 2017, pp. 627–44, doi:10.1016/j.aim.2016.12.026.","short":"A. Akopyan, I. Bárány, S. Robins, Advances in Mathematics 308 (2017) 627–644.","ista":"Akopyan A, Bárány I, Robins S. 2017. Algebraic vertices of non-convex polyhedra. Advances in Mathematics. 308, 627–644.","apa":"Akopyan, A., Bárány, I., & Robins, S. (2017). Algebraic vertices of non-convex polyhedra. Advances in Mathematics. Academic Press. https://doi.org/10.1016/j.aim.2016.12.026","ieee":"A. Akopyan, I. Bárány, and S. Robins, “Algebraic vertices of non-convex polyhedra,” Advances in Mathematics, vol. 308. Academic Press, pp. 627–644, 2017.","ama":"Akopyan A, Bárány I, Robins S. Algebraic vertices of non-convex polyhedra. Advances in Mathematics. 2017;308:627-644. doi:10.1016/j.aim.2016.12.026"},"ec_funded":1,"publist_id":"6173","date_updated":"2023-09-20T11:21:27Z","date_created":"2018-12-11T11:50:34Z","volume":308,"author":[{"id":"430D2C90-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2548-617X","first_name":"Arseniy","last_name":"Akopyan","full_name":"Akopyan, Arseniy"},{"first_name":"Imre","last_name":"Bárány","full_name":"Bárány, Imre"},{"last_name":"Robins","first_name":"Sinai","full_name":"Robins, Sinai"}],"publication_status":"published","department":[{"_id":"HeEd"}],"publisher":"Academic Press","year":"2017","month":"02","publication_identifier":{"issn":["00018708"]},"language":[{"iso":"eng"}],"doi":"10.1016/j.aim.2016.12.026","quality_controlled":"1","isi":1,"project":[{"name":"International IST Postdoc Fellowship Programme","call_identifier":"FP7","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425"}],"external_id":{"isi":["000409292900015"]},"main_file_link":[{"url":"https://arxiv.org/abs/1508.07594","open_access":"1"}],"oa":1},{"publisher":"American Society of Plant Biologists","department":[{"_id":"JiFr"}],"publication_status":"published","pmid":1,"year":"2017","volume":173,"date_updated":"2023-09-20T11:29:17Z","date_created":"2018-12-11T11:50:28Z","author":[{"full_name":"Steenackers, Ward","first_name":"Ward","last_name":"Steenackers"},{"last_name":"Klíma","first_name":"Petr","full_name":"Klíma, Petr"},{"first_name":"Mussa","last_name":"Quareshy","full_name":"Quareshy, Mussa"},{"first_name":"Igor","last_name":"Cesarino","full_name":"Cesarino, Igor"},{"last_name":"Kumpf","first_name":"Robert","full_name":"Kumpf, Robert"},{"last_name":"Corneillie","first_name":"Sander","full_name":"Corneillie, Sander"},{"full_name":"Araújo, Pedro","last_name":"Araújo","first_name":"Pedro"},{"full_name":"Viaene, Tom","first_name":"Tom","last_name":"Viaene"},{"last_name":"Goeminne","first_name":"Geert","full_name":"Goeminne, Geert"},{"first_name":"Moritz","last_name":"Nowack","full_name":"Nowack, Moritz"},{"full_name":"Ljung, Karin","first_name":"Karin","last_name":"Ljung"},{"id":"4159519E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8302-7596","first_name":"Jirí","last_name":"Friml","full_name":"Friml, Jirí"},{"full_name":"Blakeslee, Joshua","first_name":"Joshua","last_name":"Blakeslee"},{"full_name":"Novák, Ondřej","last_name":"Novák","first_name":"Ondřej"},{"first_name":"Eva","last_name":"Zažímalová","full_name":"Zažímalová, Eva"},{"first_name":"Richard","last_name":"Napier","full_name":"Napier, Richard"},{"full_name":"Boerjan, Wout","first_name":"Wout","last_name":"Boerjan"},{"full_name":"Vanholme, Bartel","first_name":"Bartel","last_name":"Vanholme"}],"ec_funded":1,"publist_id":"6199","file_date_updated":"2020-07-14T12:44:36Z","project":[{"call_identifier":"FP7","name":"Polarity and subcellular dynamics in plants","_id":"25716A02-B435-11E9-9278-68D0E5697425","grant_number":"282300"}],"isi":1,"quality_controlled":"1","external_id":{"pmid":["27837086"],"isi":["000394135800041"]},"oa":1,"language":[{"iso":"eng"}],"doi":"10.1104/pp.16.00943","publication_identifier":{"issn":["0032-0889"]},"month":"01","intvolume":" 173","title":"Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation","status":"public","ddc":["580"],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1159","oa_version":"Submitted Version","file":[{"creator":"dernst","content_type":"application/pdf","file_size":4109142,"file_name":"2016_PlantPhysi_Steenackers.pdf","access_level":"open_access","date_updated":"2020-07-14T12:44:36Z","date_created":"2019-11-18T16:12:25Z","checksum":"fd4d1cfe7ed70e54bb12ae3881f3fb91","file_id":"7040","relation":"main_file"}],"type":"journal_article","issue":"1","abstract":[{"lang":"eng","text":"Auxin steers numerous physiological processes in plants, making the tight control of its endogenous levels and spatiotemporal distribution a necessity. This regulation is achieved by different mechanisms, including auxin biosynthesis, metabolic conversions, degradation, and transport. Here, we introduce cis-cinnamic acid (c-CA) as a novel and unique addition to a small group of endogenous molecules affecting in planta auxin concentrations. c-CA is the photo-isomerization product of the phenylpropanoid pathway intermediate trans-CA (t-CA). When grown on c-CA-containing medium, an evolutionary diverse set of plant species were shown to exhibit phenotypes characteristic for high auxin levels, including inhibition of primary root growth, induction of root hairs, and promotion of adventitious and lateral rooting. By molecular docking and receptor binding assays, we showed that c-CA itself is neither an auxin nor an anti-auxin, and auxin profiling data revealed that c-CA does not significantly interfere with auxin biosynthesis. Single cell-based auxin accumulation assays showed that c-CA, and not t-CA, is a potent inhibitor of auxin efflux. Auxin signaling reporters detected changes in spatiotemporal distribution of the auxin response along the root of c-CA-treated plants, and long-distance auxin transport assays showed no inhibition of rootward auxin transport. Overall, these results suggest that the phenotypes of c-CA-treated plants are the consequence of a local change in auxin accumulation, induced by the inhibition of auxin efflux. This work reveals a novel mechanism how plants may regulate auxin levels and adds a novel, naturally occurring molecule to the chemical toolbox for the studies of auxin homeostasis."}],"page":"552 - 565","article_type":"original","citation":{"ama":"Steenackers W, Klíma P, Quareshy M, et al. Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation. Plant Physiology. 2017;173(1):552-565. doi:10.1104/pp.16.00943","ista":"Steenackers W, Klíma P, Quareshy M, Cesarino I, Kumpf R, Corneillie S, Araújo P, Viaene T, Goeminne G, Nowack M, Ljung K, Friml J, Blakeslee J, Novák O, Zažímalová E, Napier R, Boerjan W, Vanholme B. 2017. Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation. Plant Physiology. 173(1), 552–565.","ieee":"W. Steenackers et al., “Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation,” Plant Physiology, vol. 173, no. 1. American Society of Plant Biologists, pp. 552–565, 2017.","apa":"Steenackers, W., Klíma, P., Quareshy, M., Cesarino, I., Kumpf, R., Corneillie, S., … Vanholme, B. (2017). Cis-cinnamic acid is a novel natural auxin efflux inhibitor that promotes lateral root formation. Plant Physiology. American Society of Plant Biologists. https://doi.org/10.1104/pp.16.00943","mla":"Steenackers, Ward, et al. “Cis-Cinnamic Acid Is a Novel Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation.” Plant Physiology, vol. 173, no. 1, American Society of Plant Biologists, 2017, pp. 552–65, doi:10.1104/pp.16.00943.","short":"W. Steenackers, P. Klíma, M. Quareshy, I. Cesarino, R. Kumpf, S. Corneillie, P. Araújo, T. Viaene, G. Goeminne, M. Nowack, K. Ljung, J. Friml, J. Blakeslee, O. Novák, E. Zažímalová, R. Napier, W. Boerjan, B. Vanholme, Plant Physiology 173 (2017) 552–565.","chicago":"Steenackers, Ward, Petr Klíma, Mussa Quareshy, Igor Cesarino, Robert Kumpf, Sander Corneillie, Pedro Araújo, et al. “Cis-Cinnamic Acid Is a Novel Natural Auxin Efflux Inhibitor That Promotes Lateral Root Formation.” Plant Physiology. American Society of Plant Biologists, 2017. https://doi.org/10.1104/pp.16.00943."},"publication":"Plant Physiology","date_published":"2017-01-01T00:00:00Z","scopus_import":"1","article_processing_charge":"No","has_accepted_license":"1","day":"01"},{"date_published":"2017-01-01T00:00:00Z","citation":{"short":"S. Novak, R. Kollár, Genetics 205 (2017) 367–374.","mla":"Novak, Sebastian, and Richard Kollár. “Spatial Gene Frequency Waves under Genotype Dependent Dispersal.” Genetics, vol. 205, no. 1, Genetics Society of America, 2017, pp. 367–74, doi:10.1534/genetics.116.193946.","chicago":"Novak, Sebastian, and Richard Kollár. “Spatial Gene Frequency Waves under Genotype Dependent Dispersal.” Genetics. Genetics Society of America, 2017. https://doi.org/10.1534/genetics.116.193946.","ama":"Novak S, Kollár R. Spatial gene frequency waves under genotype dependent dispersal. Genetics. 2017;205(1):367-374. doi:10.1534/genetics.116.193946","ieee":"S. Novak and R. Kollár, “Spatial gene frequency waves under genotype dependent dispersal,” Genetics, vol. 205, no. 1. Genetics Society of America, pp. 367–374, 2017.","apa":"Novak, S., & Kollár, R. (2017). Spatial gene frequency waves under genotype dependent dispersal. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.116.193946","ista":"Novak S, Kollár R. 2017. Spatial gene frequency waves under genotype dependent dispersal. Genetics. 205(1), 367–374."},"publication":"Genetics","page":"367 - 374","article_processing_charge":"No","has_accepted_license":"1","day":"01","scopus_import":"1","pubrep_id":"727","file":[{"relation":"main_file","file_id":"4833","date_updated":"2020-07-14T12:44:37Z","date_created":"2018-12-12T10:10:43Z","checksum":"7c8ab79cda1f92760bbbbe0f53175bfc","file_name":"IST-2016-727-v1+1_SFC_Genetics_final.pdf","access_level":"open_access","content_type":"application/pdf","file_size":361500,"creator":"system"}],"oa_version":"Submitted Version","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1169","intvolume":" 205","ddc":["576"],"title":"Spatial gene frequency waves under genotype dependent dispersal","status":"public","issue":"1","abstract":[{"text":"Dispersal is a crucial factor in natural evolution, since it determines the habitat experienced by any population and defines the spatial scale of interactions between individuals. There is compelling evidence for systematic differences in dispersal characteristics within the same population, i.e., genotype-dependent dispersal. The consequences of genotype-dependent dispersal on other evolutionary phenomena, however, are poorly understood. In this article we investigate the effect of genotype-dependent dispersal on spatial gene frequency patterns, using a generalization of the classical diffusion model of selection and dispersal. Dispersal is characterized by the variance of dispersal (diffusion coefficient) and the mean displacement (directional advection term). We demonstrate that genotype-dependent dispersal may change the qualitative behavior of Fisher waves, which change from being “pulled” to being “pushed” wave fronts as the discrepancy in dispersal between genotypes increases. The speed of any wave is partitioned into components due to selection, genotype-dependent variance of dispersal, and genotype-dependent mean displacement. We apply our findings to wave fronts maintained by selection against heterozygotes. Furthermore, we identify a benefit of increased variance of dispersal, quantify its effect on the speed of the wave, and discuss the implications for the evolution of dispersal strategies.","lang":"eng"}],"type":"journal_article","doi":"10.1534/genetics.116.193946","language":[{"iso":"eng"}],"external_id":{"isi":["000393677300025"]},"oa":1,"project":[{"_id":"25B1EC9E-B435-11E9-9278-68D0E5697425","grant_number":"618091","name":"Speed of Adaptation in Population Genetics and Evolutionary Computation","call_identifier":"FP7"},{"call_identifier":"FP7","name":"Limits to selection in biology and in evolutionary computation","grant_number":"250152","_id":"25B07788-B435-11E9-9278-68D0E5697425"}],"quality_controlled":"1","isi":1,"publication_identifier":{"issn":["00166731"]},"month":"01","author":[{"full_name":"Novak, Sebastian","last_name":"Novak","first_name":"Sebastian","orcid":"0000-0002-2519-824X","id":"461468AE-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Kollár, Richard","last_name":"Kollár","first_name":"Richard"}],"volume":205,"date_updated":"2023-09-20T11:24:21Z","date_created":"2018-12-11T11:50:31Z","year":"2017","publisher":"Genetics Society of America","department":[{"_id":"NiBa"}],"publication_status":"published","ec_funded":1,"publist_id":"6188","file_date_updated":"2020-07-14T12:44:37Z"},{"date_published":"2017-01-06T00:00:00Z","publication":"Scientific Reports","citation":{"short":"S. Altmeyer, Y. Do, Y. Lai, Scientific Reports 7 (2017).","mla":"Altmeyer, Sebastian, et al. “Dynamics of Ferrofluidic Flow in the Taylor-Couette System with a Small Aspect Ratio.” Scientific Reports, vol. 7, 40012, Nature Publishing Group, 2017, doi:10.1038/srep40012.","chicago":"Altmeyer, Sebastian, Younghae Do, and Ying Lai. “Dynamics of Ferrofluidic Flow in the Taylor-Couette System with a Small Aspect Ratio.” Scientific Reports. Nature Publishing Group, 2017. https://doi.org/10.1038/srep40012.","ama":"Altmeyer S, Do Y, Lai Y. Dynamics of ferrofluidic flow in the Taylor-Couette system with a small aspect ratio. Scientific Reports. 2017;7. doi:10.1038/srep40012","apa":"Altmeyer, S., Do, Y., & Lai, Y. (2017). Dynamics of ferrofluidic flow in the Taylor-Couette system with a small aspect ratio. Scientific Reports. Nature Publishing Group. https://doi.org/10.1038/srep40012","ieee":"S. Altmeyer, Y. Do, and Y. Lai, “Dynamics of ferrofluidic flow in the Taylor-Couette system with a small aspect ratio,” Scientific Reports, vol. 7. Nature Publishing Group, 2017.","ista":"Altmeyer S, Do Y, Lai Y. 2017. Dynamics of ferrofluidic flow in the Taylor-Couette system with a small aspect ratio. Scientific Reports. 7, 40012."},"day":"06","has_accepted_license":"1","article_processing_charge":"No","scopus_import":"1","pubrep_id":"743","file":[{"checksum":"694aa70399444570825099c1a7ec91f2","date_updated":"2020-07-14T12:44:36Z","date_created":"2018-12-12T10:10:16Z","relation":"main_file","file_id":"4802","file_size":4546835,"content_type":"application/pdf","creator":"system","access_level":"open_access","file_name":"IST-2017-743-v1+1_srep40012.pdf"}],"oa_version":"Published Version","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1160","title":"Dynamics of ferrofluidic flow in the Taylor-Couette system with a small aspect ratio","status":"public","ddc":["532"],"intvolume":" 7","abstract":[{"lang":"eng","text":"We investigate fundamental nonlinear dynamics of ferrofluidic Taylor-Couette flow - flow confined be-tween two concentric independently rotating cylinders - consider small aspect ratio by solving the ferro-hydrodynamical equations, carrying out systematic bifurcation analysis. Without magnetic field, we find steady flow patterns, previously observed with a simple fluid, such as those containing normal one- or two vortex cells, as well as anomalous one-cell and twin-cell flow states. However, when a symmetry-breaking transverse magnetic field is present, all flow states exhibit stimulated, finite two-fold mode. Various bifurcations between steady and unsteady states can occur, corresponding to the transitions between the two-cell and one-cell states. While unsteady, axially oscillating flow states can arise, we also detect the emergence of new unsteady flow states. In particular, we uncover two new states: one contains only the azimuthally oscillating solution in the configuration of the twin-cell flow state, and an-other a rotating flow state. Topologically, these flow states are a limit cycle and a quasiperiodic solution on a two-torus, respectively. Emergence of new flow states in addition to observed ones with classical fluid, indicates that richer but potentially more controllable dynamics in ferrofluidic flows, as such flow states depend on the external magnetic field."}],"type":"journal_article","doi":"10.1038/srep40012","language":[{"iso":"eng"}],"external_id":{"isi":["000391269700001"]},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"oa":1,"isi":1,"quality_controlled":"1","month":"01","publication_identifier":{"issn":["20452322"]},"author":[{"full_name":"Altmeyer, Sebastian","last_name":"Altmeyer","first_name":"Sebastian","orcid":"0000-0001-5964-0203","id":"2EE67FDC-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Younghae","last_name":"Do","full_name":"Do, Younghae"},{"first_name":"Ying","last_name":"Lai","full_name":"Lai, Ying"}],"date_updated":"2023-09-20T11:28:49Z","date_created":"2018-12-11T11:50:28Z","volume":7,"year":"2017","publication_status":"published","publisher":"Nature Publishing Group","department":[{"_id":"BjHo"}],"file_date_updated":"2020-07-14T12:44:36Z","publist_id":"6198","article_number":"40012"},{"ec_funded":1,"publist_id":"6195","article_number":"024506","date_created":"2018-12-11T11:50:29Z","date_updated":"2023-09-20T11:25:56Z","volume":95,"author":[{"last_name":"Spałek","first_name":"Jozef","full_name":"Spałek, Jozef"},{"last_name":"Zegrodnik","first_name":"Michał","full_name":"Zegrodnik, Michał"},{"full_name":"Kaczmarczyk, Jan","first_name":"Jan","last_name":"Kaczmarczyk","id":"46C405DE-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-1629-3675"}],"publication_status":"published","publisher":"American Physical Society","department":[{"_id":"MiLe"}],"year":"2017","month":"01","publication_identifier":{"issn":["24699950"]},"language":[{"iso":"eng"}],"doi":"10.1103/PhysRevB.95.024506","isi":1,"quality_controlled":"1","project":[{"name":"International IST Postdoc Fellowship Programme","call_identifier":"FP7","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425"}],"oa":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1606.03247"}],"external_id":{"isi":["000391852800006"]},"abstract":[{"lang":"eng","text":"Selected universal experimental properties of high-temperature superconducting (HTS) cuprates have been singled out in the last decade. One of the pivotal challenges in this field is the designation of a consistent interpretation framework within which we can describe quantitatively the universal features of those systems. Here we analyze in a detailed manner the principal experimental data and compare them quantitatively with the approach based on a single-band model of strongly correlated electrons supplemented with strong antiferromagnetic (super)exchange interaction (the so-called t−J−U model). The model rationale is provided by estimating its microscopic parameters on the basis of the three-band approach for the Cu-O plane. We use our original full Gutzwiller wave-function solution by going beyond the renormalized mean-field theory (RMFT) in a systematic manner. Our approach reproduces very well the observed hole doping (δ) dependence of the kinetic-energy gain in the superconducting phase, one of the principal non-Bardeen-Cooper-Schrieffer features of the cuprates. The calculated Fermi velocity in the nodal direction is practically δ-independent and its universal value agrees very well with that determined experimentally. Also, a weak doping dependence of the Fermi wave vector leads to an almost constant value of the effective mass in a pure superconducting phase which is both observed in experiment and reproduced within our approach. An assessment of the currently used models (t−J, Hubbard) is carried out and the results of the canonical RMFT as a zeroth-order solution are provided for comparison to illustrate the necessity of the introduced higher-order contributions."}],"issue":"2","type":"journal_article","oa_version":"Submitted Version","status":"public","title":"Universal properties of high temperature superconductors from real space pairing t-J-U model and its quantitative comparison with experiment","intvolume":" 95","_id":"1162","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","day":"13","article_processing_charge":"No","scopus_import":"1","date_published":"2017-01-13T00:00:00Z","publication":"Physical Review B - Condensed Matter and Materials Physics","citation":{"ista":"Spałek J, Zegrodnik M, Kaczmarczyk J. 2017. Universal properties of high temperature superconductors from real space pairing t-J-U model and its quantitative comparison with experiment. Physical Review B - Condensed Matter and Materials Physics. 95(2), 024506.","ieee":"J. Spałek, M. Zegrodnik, and J. Kaczmarczyk, “Universal properties of high temperature superconductors from real space pairing t-J-U model and its quantitative comparison with experiment,” Physical Review B - Condensed Matter and Materials Physics, vol. 95, no. 2. American Physical Society, 2017.","apa":"Spałek, J., Zegrodnik, M., & Kaczmarczyk, J. (2017). Universal properties of high temperature superconductors from real space pairing t-J-U model and its quantitative comparison with experiment. Physical Review B - Condensed Matter and Materials Physics. American Physical Society. https://doi.org/10.1103/PhysRevB.95.024506","ama":"Spałek J, Zegrodnik M, Kaczmarczyk J. Universal properties of high temperature superconductors from real space pairing t-J-U model and its quantitative comparison with experiment. Physical Review B - Condensed Matter and Materials Physics. 2017;95(2). doi:10.1103/PhysRevB.95.024506","chicago":"Spałek, Jozef, Michał Zegrodnik, and Jan Kaczmarczyk. “Universal Properties of High Temperature Superconductors from Real Space Pairing T-J-U Model and Its Quantitative Comparison with Experiment.” Physical Review B - Condensed Matter and Materials Physics. American Physical Society, 2017. https://doi.org/10.1103/PhysRevB.95.024506.","mla":"Spałek, Jozef, et al. “Universal Properties of High Temperature Superconductors from Real Space Pairing T-J-U Model and Its Quantitative Comparison with Experiment.” Physical Review B - Condensed Matter and Materials Physics, vol. 95, no. 2, 024506, American Physical Society, 2017, doi:10.1103/PhysRevB.95.024506.","short":"J. Spałek, M. Zegrodnik, J. Kaczmarczyk, Physical Review B - Condensed Matter and Materials Physics 95 (2017)."}},{"year":"2017","publisher":"Elsevier","department":[{"_id":"ChWo"}],"publication_status":"published","author":[{"full_name":"Gajda-Zagorska, Ewa P","last_name":"Gajda-Zagorska","first_name":"Ewa P","id":"47794CF0-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Schaefer","first_name":"Robert","full_name":"Schaefer, Robert"},{"last_name":"Smołka","first_name":"Maciej","full_name":"Smołka, Maciej"},{"full_name":"Pardo, David","last_name":"Pardo","first_name":"David"},{"last_name":"Alvarez Aramberri","first_name":"Julen","full_name":"Alvarez Aramberri, Julen"}],"volume":18,"date_created":"2018-12-11T11:50:26Z","date_updated":"2023-09-20T11:29:44Z","publist_id":"6206","file_date_updated":"2019-01-18T08:43:16Z","external_id":{"isi":["000393528700009"]},"oa":1,"quality_controlled":"1","isi":1,"doi":"10.1016/j.jocs.2016.06.007","language":[{"iso":"eng"}],"publication_identifier":{"issn":["18777503"]},"month":"01","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1152","intvolume":" 18","title":"A multi objective memetic inverse solver reinforced by local optimization methods","status":"public","ddc":["000"],"file":[{"file_name":"2016_jocs_ewa.pdf","access_level":"open_access","content_type":"application/pdf","file_size":1083911,"creator":"dernst","relation":"main_file","file_id":"5842","date_updated":"2019-01-18T08:43:16Z","date_created":"2019-01-18T08:43:16Z","success":1}],"oa_version":"Submitted Version","type":"journal_article","abstract":[{"text":"We propose a new memetic strategy that can solve the multi-physics, complex inverse problems, formulated as the multi-objective optimization ones, in which objectives are misfits between the measured and simulated states of various governing processes. The multi-deme structure of the strategy allows for both, intensive, relatively cheap exploration with a moderate accuracy and more accurate search many regions of Pareto set in parallel. The special type of selection operator prefers the coherent alternative solutions, eliminating artifacts appearing in the particular processes. The additional accuracy increment is obtained by the parallel convex searches applied to the local scalarizations of the misfit vector. The strategy is dedicated for solving ill-conditioned problems, for which inverting the single physical process can lead to the ambiguous results. The skill of the selection in artifact elimination is shown on the benchmark problem, while the whole strategy was applied for identification of oil deposits, where the misfits are related to various frequencies of the magnetic and electric waves of the magnetotelluric measurements. 2016 Elsevier B.V.","lang":"eng"}],"citation":{"mla":"Gajda-Zagorska, Ewa P., et al. “A Multi Objective Memetic Inverse Solver Reinforced by Local Optimization Methods.” Journal of Computational Science, vol. 18, Elsevier, 2017, pp. 85–94, doi:10.1016/j.jocs.2016.06.007.","short":"E.P. Gajda-Zagorska, R. Schaefer, M. Smołka, D. Pardo, J. Alvarez Aramberri, Journal of Computational Science 18 (2017) 85–94.","chicago":"Gajda-Zagorska, Ewa P, Robert Schaefer, Maciej Smołka, David Pardo, and Julen Alvarez Aramberri. “A Multi Objective Memetic Inverse Solver Reinforced by Local Optimization Methods.” Journal of Computational Science. Elsevier, 2017. https://doi.org/10.1016/j.jocs.2016.06.007.","ama":"Gajda-Zagorska EP, Schaefer R, Smołka M, Pardo D, Alvarez Aramberri J. A multi objective memetic inverse solver reinforced by local optimization methods. Journal of Computational Science. 2017;18:85-94. doi:10.1016/j.jocs.2016.06.007","ista":"Gajda-Zagorska EP, Schaefer R, Smołka M, Pardo D, Alvarez Aramberri J. 2017. A multi objective memetic inverse solver reinforced by local optimization methods. Journal of Computational Science. 18, 85–94.","apa":"Gajda-Zagorska, E. P., Schaefer, R., Smołka, M., Pardo, D., & Alvarez Aramberri, J. (2017). A multi objective memetic inverse solver reinforced by local optimization methods. Journal of Computational Science. Elsevier. https://doi.org/10.1016/j.jocs.2016.06.007","ieee":"E. P. Gajda-Zagorska, R. Schaefer, M. Smołka, D. Pardo, and J. Alvarez Aramberri, “A multi objective memetic inverse solver reinforced by local optimization methods,” Journal of Computational Science, vol. 18. Elsevier, pp. 85–94, 2017."},"publication":"Journal of Computational Science","page":"85 - 94","date_published":"2017-01-01T00:00:00Z","scopus_import":"1","has_accepted_license":"1","article_processing_charge":"No","day":"01"},{"file_date_updated":"2020-07-14T12:44:37Z","publist_id":"6189","author":[{"full_name":"Perrone, Elisa","last_name":"Perrone","first_name":"Elisa","orcid":"0000-0003-0370-9835","id":"2A5F8724-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Rappold","first_name":"Andreas","full_name":"Rappold, Andreas"},{"full_name":"Müller, Werner","last_name":"Müller","first_name":"Werner"}],"date_created":"2018-12-11T11:50:31Z","date_updated":"2023-09-20T11:25:09Z","volume":26,"year":"2017","acknowledgement":"This work has been supported by the project ANR-2011-IS01-001-01 “DESIRE” and Austrian Science Fund (FWF) I833-N18. Open access funding is provided by the Austrian Science Fund (FWF). ","publication_status":"published","department":[{"_id":"CaUh"}],"publisher":"Springer","month":"08","doi":"10.1007/s10260-016-0375-6","language":[{"iso":"eng"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"oa":1,"external_id":{"isi":["000407973200004"]},"isi":1,"quality_controlled":"1","abstract":[{"lang":"eng","text":"Optimum experimental design theory has recently been extended for parameter estimation in copula models. The use of these models allows one to gain in flexibility by considering the model parameter set split into marginal and dependence parameters. However, this separation also leads to the natural issue of estimating only a subset of all model parameters. In this work, we treat this problem with the application of the (Formula presented.)-optimality to copula models. First, we provide an extension of the corresponding equivalence theory. Then, we analyze a wide range of flexible copula models to highlight the usefulness of (Formula presented.)-optimality in many possible scenarios. Finally, we discuss how the usage of the introduced design criterion also relates to the more general issue of copula selection and optimal design for model discrimination."}],"issue":"3","type":"journal_article","pubrep_id":"739","oa_version":"Submitted Version","file":[{"relation":"main_file","file_id":"5199","date_updated":"2020-07-14T12:44:37Z","date_created":"2018-12-12T10:16:13Z","checksum":"0b2d1b647ca96e9ef13a14b8b6775e0f","file_name":"IST-2017-739-v1+2_10260_2016_375_MOESM1_ESM.pdf","access_level":"open_access","file_size":56664,"content_type":"application/pdf","creator":"system"},{"checksum":"3321ef34e02e28acfc427f77cf32812a","date_updated":"2020-07-14T12:44:37Z","date_created":"2018-12-12T10:16:14Z","relation":"main_file","file_id":"5200","content_type":"application/pdf","file_size":688953,"creator":"system","access_level":"open_access","file_name":"IST-2017-739-v1+3_s10260-016-0375-6.pdf"}],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1168","status":"public","title":"D inf s optimality in copula models","ddc":["519"],"intvolume":" 26","day":"01","has_accepted_license":"1","article_processing_charge":"No","scopus_import":"1","date_published":"2017-08-01T00:00:00Z","publication":"Statistical Methods and Applications","citation":{"chicago":"Perrone, Elisa, Andreas Rappold, and Werner Müller. “D Inf s Optimality in Copula Models.” Statistical Methods and Applications. Springer, 2017. https://doi.org/10.1007/s10260-016-0375-6.","short":"E. Perrone, A. Rappold, W. Müller, Statistical Methods and Applications 26 (2017) 403–418.","mla":"Perrone, Elisa, et al. “D Inf s Optimality in Copula Models.” Statistical Methods and Applications, vol. 26, no. 3, Springer, 2017, pp. 403–18, doi:10.1007/s10260-016-0375-6.","ieee":"E. Perrone, A. Rappold, and W. Müller, “D inf s optimality in copula models,” Statistical Methods and Applications, vol. 26, no. 3. Springer, pp. 403–418, 2017.","apa":"Perrone, E., Rappold, A., & Müller, W. (2017). D inf s optimality in copula models. Statistical Methods and Applications. Springer. https://doi.org/10.1007/s10260-016-0375-6","ista":"Perrone E, Rappold A, Müller W. 2017. D inf s optimality in copula models. Statistical Methods and Applications. 26(3), 403–418.","ama":"Perrone E, Rappold A, Müller W. D inf s optimality in copula models. Statistical Methods and Applications. 2017;26(3):403-418. doi:10.1007/s10260-016-0375-6"},"page":"403 - 418"},{"date_published":"2017-01-16T00:00:00Z","publication":"Journal of Physics: Condensed Matter","citation":{"ama":"Wysokiński M, Kaczmarczyk J. Unconventional superconductivity in generalized Hubbard model role of electron–hole symmetry breaking terms. Journal of Physics: Condensed Matter. 2017;29(8). doi:10.1088/1361-648X/aa532f","ista":"Wysokiński M, Kaczmarczyk J. 2017. Unconventional superconductivity in generalized Hubbard model role of electron–hole symmetry breaking terms. Journal of Physics: Condensed Matter. 29(8), 085604.","ieee":"M. Wysokiński and J. Kaczmarczyk, “Unconventional superconductivity in generalized Hubbard model role of electron–hole symmetry breaking terms,” Journal of Physics: Condensed Matter, vol. 29, no. 8. IOP Publishing Ltd., 2017.","apa":"Wysokiński, M., & Kaczmarczyk, J. (2017). Unconventional superconductivity in generalized Hubbard model role of electron–hole symmetry breaking terms. Journal of Physics: Condensed Matter. IOP Publishing Ltd. https://doi.org/10.1088/1361-648X/aa532f","mla":"Wysokiński, Marcin, and Jan Kaczmarczyk. “Unconventional Superconductivity in Generalized Hubbard Model Role of Electron–Hole Symmetry Breaking Terms.” Journal of Physics: Condensed Matter, vol. 29, no. 8, 085604, IOP Publishing Ltd., 2017, doi:10.1088/1361-648X/aa532f.","short":"M. Wysokiński, J. Kaczmarczyk, Journal of Physics: Condensed Matter 29 (2017).","chicago":"Wysokiński, Marcin, and Jan Kaczmarczyk. “Unconventional Superconductivity in Generalized Hubbard Model Role of Electron–Hole Symmetry Breaking Terms.” Journal of Physics: Condensed Matter. IOP Publishing Ltd., 2017. https://doi.org/10.1088/1361-648X/aa532f."},"day":"16","article_processing_charge":"No","scopus_import":"1","oa_version":"None","status":"public","title":"Unconventional superconductivity in generalized Hubbard model role of electron–hole symmetry breaking terms","intvolume":" 29","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1163","abstract":[{"text":"We investigate the effect of the electron-hole (e-h) symmetry breaking on d-wave superconductivity induced by non-local effects of correlations in the generalized Hubbard model. The symmetry breaking is introduced in a two-fold manner: by the next-to-nearest neighbor hopping of electrons and by the charge-bond interaction - the off-diagonal term of the Coulomb potential. Both terms lead to a pronounced asymmetry of the superconducting order parameter. The next-to-nearest neighbor hopping enhances superconductivity for h-doping, while diminishes it for e-doping. The charge-bond interaction alone leads to the opposite effect and, additionally, to the kinetic-energy gain upon condensation in the underdoped regime. With both terms included, with similar amplitudes, the height of the superconducting dome and the critical doping remain in favor of h-doping. The influence of the charge-bond interaction on deviations from symmetry of the shape of the gap at the Fermi surface in the momentum space is briefly discussed.","lang":"eng"}],"issue":"8","type":"journal_article","language":[{"iso":"eng"}],"doi":"10.1088/1361-648X/aa532f","quality_controlled":"1","isi":1,"project":[{"name":"International IST Postdoc Fellowship Programme","call_identifier":"FP7","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425"}],"external_id":{"isi":["000393955500001"]},"month":"01","publication_identifier":{"issn":["09538984"]},"date_updated":"2023-09-20T11:25:32Z","date_created":"2018-12-11T11:50:29Z","volume":29,"author":[{"first_name":"Marcin","last_name":"Wysokiński","full_name":"Wysokiński, Marcin"},{"orcid":"0000-0002-1629-3675","id":"46C405DE-F248-11E8-B48F-1D18A9856A87","last_name":"Kaczmarczyk","first_name":"Jan","full_name":"Kaczmarczyk, Jan"}],"publication_status":"published","publisher":"IOP Publishing Ltd.","department":[{"_id":"MiLe"}],"year":"2017","publist_id":"6194","ec_funded":1,"article_number":"085604"},{"publist_id":"6182","ec_funded":1,"author":[{"orcid":"0000-0002-9823-6833","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","last_name":"Edelsbrunner","first_name":"Herbert","full_name":"Edelsbrunner, Herbert"},{"first_name":"Alexey","last_name":"Glazyrin","full_name":"Glazyrin, Alexey"},{"full_name":"Musin, Oleg","first_name":"Oleg","last_name":"Musin"},{"full_name":"Nikitenko, Anton","orcid":"0000-0002-0659-3201","id":"3E4FF1BA-F248-11E8-B48F-1D18A9856A87","last_name":"Nikitenko","first_name":"Anton"}],"date_created":"2018-12-11T11:50:32Z","date_updated":"2023-09-20T11:23:53Z","volume":37,"year":"2017","acknowledgement":"This research is partially supported by the Russian Government under the Mega Project 11.G34.31.0053, by the Toposys project FP7-ICT-318493-STREP, by ESF under the ACAT Research Network Programme, by RFBR grant 11-01-00735, and by NSF grants DMS-1101688, DMS-1400876.","publication_status":"published","publisher":"Springer","department":[{"_id":"HeEd"}],"month":"10","publication_identifier":{"issn":["02099683"]},"doi":"10.1007/s00493-016-3308-y","language":[{"iso":"eng"}],"oa":1,"main_file_link":[{"url":"https://arxiv.org/abs/1411.6337","open_access":"1"}],"external_id":{"isi":["000418056000005"]},"isi":1,"quality_controlled":"1","project":[{"_id":"255D761E-B435-11E9-9278-68D0E5697425","grant_number":"318493","call_identifier":"FP7","name":"Topological Complex Systems"}],"abstract":[{"lang":"eng","text":"We introduce the Voronoi functional of a triangulation of a finite set of points in the Euclidean plane and prove that among all geometric triangulations of the point set, the Delaunay triangulation maximizes the functional. This result neither extends to topological triangulations in the plane nor to geometric triangulations in three and higher dimensions."}],"issue":"5","type":"journal_article","oa_version":"Submitted Version","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1173","title":"The Voronoi functional is maximized by the Delaunay triangulation in the plane","status":"public","intvolume":" 37","day":"01","article_processing_charge":"No","scopus_import":"1","date_published":"2017-10-01T00:00:00Z","publication":"Combinatorica","citation":{"ama":"Edelsbrunner H, Glazyrin A, Musin O, Nikitenko A. The Voronoi functional is maximized by the Delaunay triangulation in the plane. Combinatorica. 2017;37(5):887-910. doi:10.1007/s00493-016-3308-y","ista":"Edelsbrunner H, Glazyrin A, Musin O, Nikitenko A. 2017. The Voronoi functional is maximized by the Delaunay triangulation in the plane. Combinatorica. 37(5), 887–910.","ieee":"H. Edelsbrunner, A. Glazyrin, O. Musin, and A. Nikitenko, “The Voronoi functional is maximized by the Delaunay triangulation in the plane,” Combinatorica, vol. 37, no. 5. Springer, pp. 887–910, 2017.","apa":"Edelsbrunner, H., Glazyrin, A., Musin, O., & Nikitenko, A. (2017). The Voronoi functional is maximized by the Delaunay triangulation in the plane. Combinatorica. Springer. https://doi.org/10.1007/s00493-016-3308-y","mla":"Edelsbrunner, Herbert, et al. “The Voronoi Functional Is Maximized by the Delaunay Triangulation in the Plane.” Combinatorica, vol. 37, no. 5, Springer, 2017, pp. 887–910, doi:10.1007/s00493-016-3308-y.","short":"H. Edelsbrunner, A. Glazyrin, O. Musin, A. Nikitenko, Combinatorica 37 (2017) 887–910.","chicago":"Edelsbrunner, Herbert, Alexey Glazyrin, Oleg Musin, and Anton Nikitenko. “The Voronoi Functional Is Maximized by the Delaunay Triangulation in the Plane.” Combinatorica. Springer, 2017. https://doi.org/10.1007/s00493-016-3308-y."},"page":"887 - 910"},{"volume":27,"date_updated":"2023-09-20T11:28:19Z","date_created":"2018-12-11T11:50:29Z","author":[{"full_name":"Müller, Jan","id":"AD07FDB4-0F61-11EA-8158-C4CC64CEAA8D","first_name":"Jan","last_name":"Müller"},{"full_name":"Sixt, Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6620-9179","first_name":"Michael K","last_name":"Sixt"}],"department":[{"_id":"MiSi"}],"publisher":"Cell Press","publication_status":"published","year":"2017","publist_id":"6197","language":[{"iso":"eng"}],"doi":"10.1016/j.cub.2016.11.035","isi":1,"quality_controlled":"1","external_id":{"isi":["000391902500010"]},"publication_identifier":{"issn":["09609822"]},"month":"01","oa_version":"None","intvolume":" 27","title":"Cell migration: Making the waves","status":"public","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1161","issue":"1","abstract":[{"text":"Coordinated changes of cell shape are often the result of the excitable, wave-like dynamics of the actin cytoskeleton. New work shows that, in migrating cells, protrusion waves arise from mechanochemical crosstalk between adhesion sites, membrane tension and the actin protrusive machinery.","lang":"eng"}],"type":"journal_article","date_published":"2017-01-09T00:00:00Z","page":"R24 - R25","citation":{"chicago":"Müller, Jan, and Michael K Sixt. “Cell Migration: Making the Waves.” Current Biology. Cell Press, 2017. https://doi.org/10.1016/j.cub.2016.11.035.","short":"J. Müller, M.K. Sixt, Current Biology 27 (2017) R24–R25.","mla":"Müller, Jan, and Michael K. Sixt. “Cell Migration: Making the Waves.” Current Biology, vol. 27, no. 1, Cell Press, 2017, pp. R24–25, doi:10.1016/j.cub.2016.11.035.","apa":"Müller, J., & Sixt, M. K. (2017). Cell migration: Making the waves. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2016.11.035","ieee":"J. Müller and M. K. Sixt, “Cell migration: Making the waves,” Current Biology, vol. 27, no. 1. Cell Press, pp. R24–R25, 2017.","ista":"Müller J, Sixt MK. 2017. Cell migration: Making the waves. Current Biology. 27(1), R24–R25.","ama":"Müller J, Sixt MK. Cell migration: Making the waves. Current Biology. 2017;27(1):R24-R25. doi:10.1016/j.cub.2016.11.035"},"publication":"Current Biology","article_processing_charge":"No","day":"09","scopus_import":"1"},{"date_published":"2017-03-31T00:00:00Z","page":"169 - 187","citation":{"chicago":"Avni, Guy, Shubham Goel, Thomas A Henzinger, and Guillermo Rodríguez Navas. “Computing Scores of Forwarding Schemes in Switched Networks with Probabilistic Faults,” 10206:169–87. Springer, 2017. https://doi.org/10.1007/978-3-662-54580-5_10.","short":"G. Avni, S. Goel, T.A. Henzinger, G. Rodríguez Navas, in:, Springer, 2017, pp. 169–187.","mla":"Avni, Guy, et al. Computing Scores of Forwarding Schemes in Switched Networks with Probabilistic Faults. Vol. 10206, Springer, 2017, pp. 169–87, doi:10.1007/978-3-662-54580-5_10.","ieee":"G. Avni, S. Goel, T. A. Henzinger, and G. Rodríguez Navas, “Computing scores of forwarding schemes in switched networks with probabilistic faults,” presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Uppsala, Sweden, 2017, vol. 10206, pp. 169–187.","apa":"Avni, G., Goel, S., Henzinger, T. A., & Rodríguez Navas, G. (2017). Computing scores of forwarding schemes in switched networks with probabilistic faults (Vol. 10206, pp. 169–187). Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Uppsala, Sweden: Springer. https://doi.org/10.1007/978-3-662-54580-5_10","ista":"Avni G, Goel S, Henzinger TA, Rodríguez Navas G. 2017. Computing scores of forwarding schemes in switched networks with probabilistic faults. TACAS: Tools and Algorithms for the Construction and Analysis of Systems, LNCS, vol. 10206, 169–187.","ama":"Avni G, Goel S, Henzinger TA, Rodríguez Navas G. Computing scores of forwarding schemes in switched networks with probabilistic faults. In: Vol 10206. Springer; 2017:169-187. doi:10.1007/978-3-662-54580-5_10"},"has_accepted_license":"1","article_processing_charge":"No","day":"31","scopus_import":"1","oa_version":"Submitted Version","file":[{"access_level":"open_access","file_name":"IST-2017-758-v1+1_tacas-cr.pdf","creator":"system","content_type":"application/pdf","file_size":321800,"file_id":"4698","relation":"main_file","date_created":"2018-12-12T10:08:37Z","date_updated":"2018-12-12T10:08:37Z"}],"pubrep_id":"758","intvolume":" 10206","ddc":["000"],"title":"Computing scores of forwarding schemes in switched networks with probabilistic faults","status":"public","_id":"1116","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","abstract":[{"lang":"eng","text":"Time-triggered switched networks are a deterministic communication infrastructure used by real-time distributed embedded systems. Due to the criticality of the applications running over them, developers need to ensure that end-to-end communication is dependable and predictable. Traditional approaches assume static networks that are not flexible to changes caused by reconfigurations or, more importantly, faults, which are dealt with in the application using redundancy. We adopt the concept of handling faults in the switches from non-real-time networks while maintaining the required predictability. \r\n\r\nWe study a class of forwarding schemes that can handle various types of failures. We consider probabilistic failures. We study a class of forwarding schemes that can handle various types of failures. We consider probabilistic failures. For a given network with a forwarding scheme and a constant ℓ, we compute the {\\em score} of the scheme, namely the probability (induced by faults) that at least ℓ messages arrive on time. We reduce the scoring problem to a reachability problem on a Markov chain with a "product-like" structure. Its special structure allows us to reason about it symbolically, and reduce the scoring problem to #SAT. Our solution is generic and can be adapted to different networks and other contexts. Also, we show the computational complexity of the scoring problem is #P-complete, and we study methods to estimate the score. We evaluate the effectiveness of our techniques with an implementation. "}],"alternative_title":["LNCS"],"type":"conference","language":[{"iso":"eng"}],"doi":"10.1007/978-3-662-54580-5_10","conference":{"name":"TACAS: Tools and Algorithms for the Construction and Analysis of Systems","start_date":"2017-04-22","location":"Uppsala, Sweden","end_date":"2017-04-29"},"project":[{"call_identifier":"FWF","name":"Moderne Concurrency Paradigms","_id":"25F5A88A-B435-11E9-9278-68D0E5697425","grant_number":"S11402-N23"},{"name":"The Wittgenstein Prize","call_identifier":"FWF","_id":"25F42A32-B435-11E9-9278-68D0E5697425","grant_number":"Z211"}],"isi":1,"quality_controlled":"1","external_id":{"isi":["000440733400010"]},"oa":1,"publication_identifier":{"issn":["03029743"]},"month":"03","volume":10206,"date_created":"2018-12-11T11:50:14Z","date_updated":"2023-09-20T11:32:43Z","author":[{"full_name":"Avni, Guy","id":"463C8BC2-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5588-8287","first_name":"Guy","last_name":"Avni"},{"first_name":"Shubham","last_name":"Goel","full_name":"Goel, Shubham"},{"full_name":"Henzinger, Thomas A","first_name":"Thomas A","last_name":"Henzinger","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","orcid":"0000−0002−2985−7724"},{"full_name":"Rodríguez Navas, Guillermo","last_name":"Rodríguez Navas","first_name":"Guillermo"}],"department":[{"_id":"ToHe"}],"publisher":"Springer","publication_status":"published","year":"2017","publist_id":"6246","file_date_updated":"2018-12-12T10:08:37Z"},{"date_published":"2017-01-18T00:00:00Z","page":"308 - 314","citation":{"chicago":"Gan, Jian, Shih-Ming Weng, Alejandro Pernia-Andrade, Jozsef L Csicsvari, and Peter M Jonas. “Phase-Locked Inhibition, but Not Excitation, Underlies Hippocampal Ripple Oscillations in Awake Mice in Vivo.” Neuron. Elsevier, 2017. https://doi.org/10.1016/j.neuron.2016.12.018.","mla":"Gan, Jian, et al. “Phase-Locked Inhibition, but Not Excitation, Underlies Hippocampal Ripple Oscillations in Awake Mice in Vivo.” Neuron, vol. 93, no. 2, Elsevier, 2017, pp. 308–14, doi:10.1016/j.neuron.2016.12.018.","short":"J. Gan, S.-M. Weng, A. Pernia-Andrade, J.L. Csicsvari, P.M. Jonas, Neuron 93 (2017) 308–314.","ista":"Gan J, Weng S-M, Pernia-Andrade A, Csicsvari JL, Jonas PM. 2017. Phase-locked inhibition, but not excitation, underlies hippocampal ripple oscillations in awake mice in vivo. Neuron. 93(2), 308–314.","ieee":"J. Gan, S.-M. Weng, A. Pernia-Andrade, J. L. Csicsvari, and P. M. Jonas, “Phase-locked inhibition, but not excitation, underlies hippocampal ripple oscillations in awake mice in vivo,” Neuron, vol. 93, no. 2. Elsevier, pp. 308–314, 2017.","apa":"Gan, J., Weng, S.-M., Pernia-Andrade, A., Csicsvari, J. L., & Jonas, P. M. (2017). Phase-locked inhibition, but not excitation, underlies hippocampal ripple oscillations in awake mice in vivo. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2016.12.018","ama":"Gan J, Weng S-M, Pernia-Andrade A, Csicsvari JL, Jonas PM. Phase-locked inhibition, but not excitation, underlies hippocampal ripple oscillations in awake mice in vivo. Neuron. 2017;93(2):308-314. doi:10.1016/j.neuron.2016.12.018"},"publication":"Neuron","has_accepted_license":"1","article_processing_charge":"No","day":"18","scopus_import":"1","oa_version":"Published Version","file":[{"creator":"system","content_type":"application/pdf","file_size":2738950,"access_level":"open_access","file_name":"IST-2017-752-v1+1_1-s2.0-S0896627316309606-main.pdf","date_created":"2018-12-12T10:08:56Z","date_updated":"2018-12-12T10:08:56Z","file_id":"4719","relation":"main_file"}],"pubrep_id":"752","intvolume":" 93","title":"Phase-locked inhibition, but not excitation, underlies hippocampal ripple oscillations in awake mice in vivo","ddc":["571"],"status":"public","_id":"1118","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","issue":"2","abstract":[{"text":"Sharp wave-ripple (SWR) oscillations play a key role in memory consolidation during non-rapid eye movement sleep, immobility, and consummatory behavior. However, whether temporally modulated synaptic excitation or inhibition underlies the ripples is controversial. To address this question, we performed simultaneous recordings of excitatory and inhibitory postsynaptic currents (EPSCs and IPSCs) and local field potentials (LFPs) in the CA1 region of awake mice in vivo. During SWRs, inhibition dominated over excitation, with a peak conductance ratio of 4.1 ± 0.5. Furthermore, the amplitude of SWR-associated IPSCs was positively correlated with SWR magnitude, whereas that of EPSCs was not. Finally, phase analysis indicated that IPSCs were phase-locked to individual ripple cycles, whereas EPSCs were uniformly distributed in phase space. Optogenetic inhibition indicated that PV+ interneurons provided a major contribution to SWR-associated IPSCs. Thus, phasic inhibition, but not excitation, shapes SWR oscillations in the hippocampal CA1 region in vivo.","lang":"eng"}],"type":"journal_article","language":[{"iso":"eng"}],"acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"ScienComp"},{"_id":"PreCl"}],"doi":"10.1016/j.neuron.2016.12.018","project":[{"name":"Mechanisms of transmitter release at GABAergic synapses","call_identifier":"FWF","grant_number":"P24909-B24","_id":"25C26B1E-B435-11E9-9278-68D0E5697425"},{"name":"Nanophysiology of fast-spiking, parvalbumin-expressing GABAergic interneurons","call_identifier":"FP7","_id":"25C0F108-B435-11E9-9278-68D0E5697425","grant_number":"268548"}],"quality_controlled":"1","isi":1,"oa":1,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"isi":["000396428200010"]},"month":"01","volume":93,"date_created":"2018-12-11T11:50:15Z","date_updated":"2023-09-20T11:31:48Z","author":[{"full_name":"Gan, Jian","id":"3614E438-F248-11E8-B48F-1D18A9856A87","last_name":"Gan","first_name":"Jian"},{"id":"2F9C5AC8-F248-11E8-B48F-1D18A9856A87","first_name":"Shih-Ming","last_name":"Weng","full_name":"Weng, Shih-Ming"},{"id":"36963E98-F248-11E8-B48F-1D18A9856A87","first_name":"Alejandro","last_name":"Pernia-Andrade","full_name":"Pernia-Andrade, Alejandro"},{"id":"3FA14672-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-5193-4036","first_name":"Jozsef L","last_name":"Csicsvari","full_name":"Csicsvari, Jozsef L"},{"full_name":"Jonas, Peter M","id":"353C1B58-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5001-4804","first_name":"Peter M","last_name":"Jonas"}],"publisher":"Elsevier","department":[{"_id":"PeJo"},{"_id":"JoCs"}],"publication_status":"published","year":"2017","publist_id":"6244","ec_funded":1,"file_date_updated":"2018-12-12T10:08:56Z"},{"type":"journal_article","abstract":[{"lang":"eng","text":"GABAergic synapses in brain circuits generate inhibitory output signals with submillisecond latency and temporal precision. Whether the molecular identity of the release sensor contributes to these signaling properties remains unclear. Here, we examined the Ca^2+ sensor of exocytosis at GABAergic basket cell (BC) to Purkinje cell (PC) synapses in cerebellum. Immunolabeling suggested that BC terminals selectively expressed synaptotagmin 2 (Syt2), whereas synaptotagmin 1 (Syt1) was enriched in excitatory terminals. Genetic elimination of Syt2 reduced action potential-evoked release to ∼10%, identifying Syt2 as the major Ca^2+ sensor at BC-PC synapses. Differential adenovirus-mediated rescue revealed that Syt2 triggered release with shorter latency and higher temporal precision and mediated faster vesicle pool replenishment than Syt1. Furthermore, deletion of Syt2 severely reduced and delayed disynaptic inhibition following parallel fiber stimulation. Thus, the selective use of Syt2 as release sensor at BC-PC synapses ensures fast and efficient feedforward inhibition in cerebellar microcircuits. #bioimagingfacility-author"}],"issue":"3","_id":"1117","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","ddc":["571"],"title":"Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse","status":"public","intvolume":" 18","pubrep_id":"751","oa_version":"Published Version","file":[{"relation":"main_file","file_id":"5195","date_updated":"2018-12-12T10:16:09Z","date_created":"2018-12-12T10:16:09Z","file_name":"IST-2017-751-v1+1_1-s2.0-S2211124716317740-main.pdf","access_level":"open_access","file_size":4427591,"content_type":"application/pdf","creator":"system"}],"scopus_import":"1","day":"17","article_processing_charge":"No","has_accepted_license":"1","publication":"Cell Reports","citation":{"ama":"Chen C, Arai itaru, Satterield R, Young S, Jonas PM. Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse. Cell Reports. 2017;18(3):723-736. doi:10.1016/j.celrep.2016.12.067","ieee":"C. Chen, itaru Arai, R. Satterield, S. Young, and P. M. Jonas, “Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse,” Cell Reports, vol. 18, no. 3. Cell Press, pp. 723–736, 2017.","apa":"Chen, C., Arai, itaru, Satterield, R., Young, S., & Jonas, P. M. (2017). Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse. Cell Reports. Cell Press. https://doi.org/10.1016/j.celrep.2016.12.067","ista":"Chen C, Arai itaru, Satterield R, Young S, Jonas PM. 2017. Synaptotagmin 2 is the fast Ca2+ sensor at a central inhibitory synapse. Cell Reports. 18(3), 723–736.","short":"C. Chen, itaru Arai, R. Satterield, S. Young, P.M. Jonas, Cell Reports 18 (2017) 723–736.","mla":"Chen, Chong, et al. “Synaptotagmin 2 Is the Fast Ca2+ Sensor at a Central Inhibitory Synapse.” Cell Reports, vol. 18, no. 3, Cell Press, 2017, pp. 723–36, doi:10.1016/j.celrep.2016.12.067.","chicago":"Chen, Chong, itaru Arai, Rachel Satterield, Samuel Young, and Peter M Jonas. “Synaptotagmin 2 Is the Fast Ca2+ Sensor at a Central Inhibitory Synapse.” Cell Reports. Cell Press, 2017. https://doi.org/10.1016/j.celrep.2016.12.067."},"page":"723 - 736","date_published":"2017-01-17T00:00:00Z","file_date_updated":"2018-12-12T10:16:09Z","publist_id":"6245","ec_funded":1,"year":"2017","publication_status":"published","publisher":"Cell Press","department":[{"_id":"PeJo"}],"author":[{"first_name":"Chong","last_name":"Chen","id":"3DFD581A-F248-11E8-B48F-1D18A9856A87","full_name":"Chen, Chong"},{"first_name":"Itaru","last_name":"Arai","id":"32A73F6C-F248-11E8-B48F-1D18A9856A87","full_name":"Arai, Itaru"},{"last_name":"Satterield","first_name":"Rachel","full_name":"Satterield, Rachel"},{"full_name":"Young, Samuel","last_name":"Young","first_name":"Samuel"},{"first_name":"Peter M","last_name":"Jonas","id":"353C1B58-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5001-4804","full_name":"Jonas, Peter M"}],"related_material":{"record":[{"status":"public","relation":"dissertation_contains","id":"324"}]},"date_updated":"2023-09-20T11:32:15Z","date_created":"2018-12-11T11:50:14Z","volume":18,"month":"01","publication_identifier":{"issn":["22111247"]},"external_id":{"isi":["000396470600013"]},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"oa":1,"quality_controlled":"1","isi":1,"project":[{"call_identifier":"FWF","name":"Mechanisms of transmitter release at GABAergic synapses","grant_number":"P24909-B24","_id":"25C26B1E-B435-11E9-9278-68D0E5697425"},{"grant_number":"268548","_id":"25C0F108-B435-11E9-9278-68D0E5697425","call_identifier":"FP7","name":"Nanophysiology of fast-spiking, parvalbumin-expressing GABAergic interneurons"}],"doi":"10.1016/j.celrep.2016.12.067","acknowledged_ssus":[{"_id":"Bio"},{"_id":"PreCl"}],"language":[{"iso":"eng"}]},{"publist_id":"6226","ec_funded":1,"file_date_updated":"2018-12-12T10:10:22Z","publisher":"American Association for the Advancement of Science","department":[{"_id":"JoCs"}],"publication_status":"published","year":"2017","volume":355,"date_created":"2018-12-11T11:50:19Z","date_updated":"2023-09-20T11:30:35Z","author":[{"last_name":"O'Neill","first_name":"Joseph","id":"426376DC-F248-11E8-B48F-1D18A9856A87","full_name":"O'Neill, Joseph"},{"full_name":"Boccara, Charlotte","first_name":"Charlotte","last_name":"Boccara","id":"3FC06552-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-7237-5109"},{"full_name":"Stella, Federico","first_name":"Federico","last_name":"Stella","id":"39AF1E74-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-9439-3148"},{"full_name":"Schönenberger, Philipp","id":"3B9D816C-F248-11E8-B48F-1D18A9856A87","first_name":"Philipp","last_name":"Schönenberger"},{"full_name":"Csicsvari, Jozsef L","orcid":"0000-0002-5193-4036","id":"3FA14672-F248-11E8-B48F-1D18A9856A87","last_name":"Csicsvari","first_name":"Jozsef L"}],"publication_identifier":{"issn":["00368075"]},"month":"01","project":[{"_id":"257A4776-B435-11E9-9278-68D0E5697425","grant_number":"281511","name":"Memory-related information processing in neuronal circuits of the hippocampus and entorhinal cortex","call_identifier":"FP7"}],"isi":1,"quality_controlled":"1","oa":1,"external_id":{"isi":["000391743700044"]},"language":[{"iso":"eng"}],"doi":"10.1126/science.aag2787","type":"journal_article","issue":"6321","abstract":[{"text":"The hippocampus is thought to initiate systems-wide mnemonic processes through the reactivation of previously acquired spatial and episodic memory traces, which can recruit the entorhinal cortex as a first stage of memory redistribution to other brain areas. Hippocampal reactivation occurs during sharp wave-ripples, in which synchronous network firing encodes sequences of places.We investigated the coordination of this replay by recording assembly activity simultaneously in the CA1 region of the hippocampus and superficial layers of the medial entorhinal cortex. We found that entorhinal cell assemblies can replay trajectories independently of the hippocampus and sharp wave-ripples. This suggests that the hippocampus is not the sole initiator of spatial and episodic memory trace reactivation. Memory systems involved in these processes may include nonhierarchical, parallel components.","lang":"eng"}],"intvolume":" 355","title":"Superficial layers of the medial entorhinal cortex replay independently of the hippocampus","status":"public","ddc":["571"],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1132","file":[{"access_level":"open_access","file_name":"IST-2018-976-v1+1_2017Preprint_ONeill_Superficial_layers.pdf","creator":"system","file_size":3761201,"content_type":"application/pdf","file_id":"4809","relation":"main_file","date_updated":"2018-12-12T10:10:22Z","date_created":"2018-12-12T10:10:22Z"}],"oa_version":"Submitted Version","pubrep_id":"976","scopus_import":"1","has_accepted_license":"1","article_processing_charge":"No","day":"13","page":"184 - 188","citation":{"chicago":"O’Neill, Joseph, Charlotte N. Boccara, Federico Stella, Philipp Schönenberger, and Jozsef L Csicsvari. “Superficial Layers of the Medial Entorhinal Cortex Replay Independently of the Hippocampus.” Science. American Association for the Advancement of Science, 2017. https://doi.org/10.1126/science.aag2787.","short":"J. O’Neill, C.N. Boccara, F. Stella, P. Schönenberger, J.L. Csicsvari, Science 355 (2017) 184–188.","mla":"O’Neill, Joseph, et al. “Superficial Layers of the Medial Entorhinal Cortex Replay Independently of the Hippocampus.” Science, vol. 355, no. 6321, American Association for the Advancement of Science, 2017, pp. 184–88, doi:10.1126/science.aag2787.","ieee":"J. O’Neill, C. N. Boccara, F. Stella, P. Schönenberger, and J. L. Csicsvari, “Superficial layers of the medial entorhinal cortex replay independently of the hippocampus,” Science, vol. 355, no. 6321. American Association for the Advancement of Science, pp. 184–188, 2017.","apa":"O’Neill, J., Boccara, C. N., Stella, F., Schönenberger, P., & Csicsvari, J. L. (2017). Superficial layers of the medial entorhinal cortex replay independently of the hippocampus. Science. American Association for the Advancement of Science. https://doi.org/10.1126/science.aag2787","ista":"O’Neill J, Boccara CN, Stella F, Schönenberger P, Csicsvari JL. 2017. Superficial layers of the medial entorhinal cortex replay independently of the hippocampus. Science. 355(6321), 184–188.","ama":"O’Neill J, Boccara CN, Stella F, Schönenberger P, Csicsvari JL. Superficial layers of the medial entorhinal cortex replay independently of the hippocampus. Science. 2017;355(6321):184-188. doi:10.1126/science.aag2787"},"publication":"Science","date_published":"2017-01-13T00:00:00Z"},{"scopus_import":"1","day":"06","article_processing_charge":"No","publication":"Physical Review A","citation":{"ama":"Li X, Seiringer R, Lemeshko M. Angular self-localization of impurities rotating in a bosonic bath. Physical Review A. 2017;95(3). doi:10.1103/PhysRevA.95.033608","ista":"Li X, Seiringer R, Lemeshko M. 2017. Angular self-localization of impurities rotating in a bosonic bath. Physical Review A. 95(3), 033608.","ieee":"X. Li, R. Seiringer, and M. Lemeshko, “Angular self-localization of impurities rotating in a bosonic bath,” Physical Review A, vol. 95, no. 3. American Physical Society, 2017.","apa":"Li, X., Seiringer, R., & Lemeshko, M. (2017). Angular self-localization of impurities rotating in a bosonic bath. Physical Review A. American Physical Society. https://doi.org/10.1103/PhysRevA.95.033608","mla":"Li, Xiang, et al. “Angular Self-Localization of Impurities Rotating in a Bosonic Bath.” Physical Review A, vol. 95, no. 3, 033608, American Physical Society, 2017, doi:10.1103/PhysRevA.95.033608.","short":"X. Li, R. Seiringer, M. Lemeshko, Physical Review A 95 (2017).","chicago":"Li, Xiang, Robert Seiringer, and Mikhail Lemeshko. “Angular Self-Localization of Impurities Rotating in a Bosonic Bath.” Physical Review A. American Physical Society, 2017. https://doi.org/10.1103/PhysRevA.95.033608."},"date_published":"2017-03-06T00:00:00Z","type":"journal_article","abstract":[{"text":"The existence of a self-localization transition in the polaron problem has been under an active debate ever since Landau suggested it 83 years ago. Here we reveal the self-localization transition for the rotational analogue of the polaron -- the angulon quasiparticle. We show that, unlike for the polarons, self-localization of angulons occurs at finite impurity-bath coupling already at the mean-field level. The transition is accompanied by the spherical-symmetry breaking of the angulon ground state and a discontinuity in the first derivative of the ground-state energy. Moreover, the type of the symmetry breaking is dictated by the symmetry of the microscopic impurity-bath interaction, which leads to a number of distinct self-localized states. The predicted effects can potentially be addressed in experiments on cold molecules trapped in superfluid helium droplets and ultracold quantum gases, as well as on electronic excitations in solids and Bose-Einstein condensates. ","lang":"eng"}],"issue":"3","status":"public","title":"Angular self-localization of impurities rotating in a bosonic bath","intvolume":" 95","_id":"1120","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa_version":"Published Version","month":"03","publication_identifier":{"issn":["24699926"]},"quality_controlled":"1","isi":1,"project":[{"call_identifier":"H2020","name":"Analysis of quantum many-body systems","grant_number":"694227","_id":"25C6DC12-B435-11E9-9278-68D0E5697425"},{"name":"Structure of the Excitation Spectrum for Many-Body Quantum Systems","call_identifier":"FWF","_id":"25C878CE-B435-11E9-9278-68D0E5697425","grant_number":"P27533_N27"},{"call_identifier":"FWF","name":"Quantum rotations in the presence of a many-body environment","grant_number":"P29902","_id":"26031614-B435-11E9-9278-68D0E5697425"}],"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1610.04908"}],"oa":1,"external_id":{"isi":["000395981900009"]},"language":[{"iso":"eng"}],"doi":"10.1103/PhysRevA.95.033608","article_number":"033608","publist_id":"6242","ec_funded":1,"publication_status":"published","department":[{"_id":"MiLe"},{"_id":"RoSe"}],"publisher":"American Physical Society","year":"2017","date_updated":"2023-09-20T11:30:58Z","date_created":"2018-12-11T11:50:15Z","volume":95,"author":[{"first_name":"Xiang","last_name":"Li","id":"4B7E523C-F248-11E8-B48F-1D18A9856A87","full_name":"Li, Xiang"},{"full_name":"Seiringer, Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6781-0521","first_name":"Robert","last_name":"Seiringer"},{"full_name":"Lemeshko, Mikhail","first_name":"Mikhail","last_name":"Lemeshko","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6990-7802"}],"related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"8958"}]}},{"oa_version":"Submitted Version","intvolume":" 118","status":"public","title":"Anomalous screening of quantum impurities by a neutral environment","_id":"1133","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","issue":"8","abstract":[{"lang":"eng","text":"It is a common knowledge that an effective interaction of a quantum impurity with an electromagnetic field can be screened by surrounding charge carriers, whether mobile or static. Here we demonstrate that very strong, \"anomalous\" screening can take place in the presence of a neutral, weakly polarizable environment, due to an exchange of orbital angular momentum between the impurity and the bath. Furthermore, we show that it is possible to generalize all phenomena related to isolated impurities in an external field to the case when a many-body environment is present, by casting the problem in terms of the angulon quasiparticle. As a result, the relevant observables such as the effective Rabi frequency, geometric phase, and impurity spatial alignment are straightforward to evaluate in terms of a single parameter: the angular-momentum-dependent screening factor."}],"type":"journal_article","date_published":"2017-02-22T00:00:00Z","citation":{"ama":"Yakaboylu E, Lemeshko M. Anomalous screening of quantum impurities by a neutral environment. Physical Review Letters. 2017;118(8). doi:10.1103/PhysRevLett.118.085302","ista":"Yakaboylu E, Lemeshko M. 2017. Anomalous screening of quantum impurities by a neutral environment. Physical Review Letters. 118(8), 085302.","apa":"Yakaboylu, E., & Lemeshko, M. (2017). Anomalous screening of quantum impurities by a neutral environment. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.118.085302","ieee":"E. Yakaboylu and M. Lemeshko, “Anomalous screening of quantum impurities by a neutral environment,” Physical Review Letters, vol. 118, no. 8. American Physical Society, 2017.","mla":"Yakaboylu, Enderalp, and Mikhail Lemeshko. “Anomalous Screening of Quantum Impurities by a Neutral Environment.” Physical Review Letters, vol. 118, no. 8, 085302, American Physical Society, 2017, doi:10.1103/PhysRevLett.118.085302.","short":"E. Yakaboylu, M. Lemeshko, Physical Review Letters 118 (2017).","chicago":"Yakaboylu, Enderalp, and Mikhail Lemeshko. “Anomalous Screening of Quantum Impurities by a Neutral Environment.” Physical Review Letters. American Physical Society, 2017. https://doi.org/10.1103/PhysRevLett.118.085302."},"publication":"Physical Review Letters","article_processing_charge":"No","day":"22","scopus_import":"1","volume":118,"date_created":"2018-12-11T11:50:19Z","date_updated":"2023-09-20T11:30:08Z","author":[{"last_name":"Yakaboylu","first_name":"Enderalp","orcid":"0000-0001-5973-0874","id":"38CB71F6-F248-11E8-B48F-1D18A9856A87","full_name":"Yakaboylu, Enderalp"},{"id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6990-7802","first_name":"Mikhail","last_name":"Lemeshko","full_name":"Lemeshko, Mikhail"}],"publisher":"American Physical Society","department":[{"_id":"MiLe"}],"publication_status":"published","year":"2017","publist_id":"6225","ec_funded":1,"article_number":"085302","language":[{"iso":"eng"}],"doi":"10.1103/PhysRevLett.118.085302","project":[{"name":"International IST Postdoc Fellowship Programme","call_identifier":"FP7","grant_number":"291734","_id":"25681D80-B435-11E9-9278-68D0E5697425"},{"name":"Quantum rotations in the presence of a many-body environment","call_identifier":"FWF","_id":"26031614-B435-11E9-9278-68D0E5697425","grant_number":"P29902"}],"quality_controlled":"1","isi":1,"oa":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1612.02820"}],"external_id":{"isi":["000394667600003"]},"publication_identifier":{"issn":["00319007"]},"month":"02"},{"type":"journal_article","issue":"9","abstract":[{"text":"Understanding the behavior of molecules interacting with superfluid helium represents a formidable challenge and, in general, requires approaches relying on large-scale numerical simulations. Here we demonstrate that experimental data collected over the last 20 years provide evidence that molecules immersed in superfluid helium form recently-predicted angulon quasiparticles [Phys. Rev. Lett. 114, 203001 (2015)]. Most importantly, casting the many-body problem in terms of angulons amounts to a drastic simplification and yields effective molecular moments of inertia as straightforward analytic solutions of a simple microscopic Hamiltonian. The outcome of the angulon theory is in good agreement with experiment for a broad range of molecular impurities, from heavy to medium-mass to light species. These results pave the way to understanding molecular rotation in liquid and crystalline phases in terms of the angulon quasiparticle.","lang":"eng"}],"intvolume":" 118","status":"public","title":"Quasiparticle approach to molecules interacting with quantum solvents","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","_id":"1119","oa_version":"Submitted Version","article_processing_charge":"No","day":"27","citation":{"short":"M. Lemeshko, Physical Review Letters 118 (2017).","mla":"Lemeshko, Mikhail. “Quasiparticle Approach to Molecules Interacting with Quantum Solvents.” Physical Review Letters, vol. 118, no. 9, 095301, American Physical Society, 2017, doi:10.1103/PhysRevLett.118.095301.","chicago":"Lemeshko, Mikhail. “Quasiparticle Approach to Molecules Interacting with Quantum Solvents.” Physical Review Letters. American Physical Society, 2017. https://doi.org/10.1103/PhysRevLett.118.095301.","ama":"Lemeshko M. Quasiparticle approach to molecules interacting with quantum solvents. Physical Review Letters. 2017;118(9). doi:10.1103/PhysRevLett.118.095301","ieee":"M. Lemeshko, “Quasiparticle approach to molecules interacting with quantum solvents,” Physical Review Letters, vol. 118, no. 9. American Physical Society, 2017.","apa":"Lemeshko, M. (2017). Quasiparticle approach to molecules interacting with quantum solvents. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.118.095301","ista":"Lemeshko M. 2017. Quasiparticle approach to molecules interacting with quantum solvents. Physical Review Letters. 118(9), 095301."},"publication":"Physical Review Letters","date_published":"2017-02-27T00:00:00Z","article_number":"095301","publist_id":"6243","publisher":"American Physical Society","department":[{"_id":"MiLe"}],"publication_status":"published","year":"2017","volume":118,"date_created":"2018-12-11T11:50:15Z","date_updated":"2023-09-20T11:31:22Z","author":[{"id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6990-7802","first_name":"Mikhail","last_name":"Lemeshko","full_name":"Lemeshko, Mikhail"}],"publication_identifier":{"issn":["00319007"]},"month":"02","project":[{"grant_number":"11-NSF-1070","_id":"25636330-B435-11E9-9278-68D0E5697425","name":"ROOTS Genome-wide Analysis of Root Traits"}],"isi":1,"quality_controlled":"1","oa":1,"main_file_link":[{"url":"https://arxiv.org/abs/1610.01604","open_access":"1"}],"external_id":{"isi":["000404769200006"]},"language":[{"iso":"eng"}],"doi":"10.1103/PhysRevLett.118.095301"},{"oa":1,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"isi":["000393367600001"]},"project":[{"grant_number":"282300","_id":"25716A02-B435-11E9-9278-68D0E5697425","name":"Polarity and subcellular dynamics in plants","call_identifier":"FP7"}],"quality_controlled":"1","isi":1,"doi":"10.1038/srep41906","language":[{"iso":"eng"}],"publication_identifier":{"issn":["20452322"]},"month":"02","year":"2017","acknowledgement":"European Research Council (project ERC-2011-StG-20101109-PSDP), European Social Fund (CZ.1.07/2.3.00/20.0043) and the Czech Science Foundation (GA13-40637S) [JF].","publisher":"Nature Publishing Group","department":[{"_id":"JiFr"}],"publication_status":"published","author":[{"full_name":"Kuhn, Benjamin","last_name":"Kuhn","first_name":"Benjamin"},{"first_name":"Tomasz","last_name":"Nodzyński","full_name":"Nodzyński, Tomasz"},{"last_name":"Errafi","first_name":"Sanae","full_name":"Errafi, Sanae"},{"full_name":"Bucher, Rahel","last_name":"Bucher","first_name":"Rahel"},{"first_name":"Shibu","last_name":"Gupta","full_name":"Gupta, Shibu"},{"first_name":"Bibek","last_name":"Aryal","full_name":"Aryal, Bibek"},{"full_name":"Dobrev, Petre","last_name":"Dobrev","first_name":"Petre"},{"last_name":"Bigler","first_name":"Laurent","full_name":"Bigler, Laurent"},{"full_name":"Geisler, Markus","last_name":"Geisler","first_name":"Markus"},{"last_name":"Zažímalová","first_name":"Eva","full_name":"Zažímalová, Eva"},{"first_name":"Jirí","last_name":"Friml","id":"4159519E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-8302-7596","full_name":"Friml, Jirí"},{"full_name":"Ringli, Christoph","first_name":"Christoph","last_name":"Ringli"}],"volume":7,"date_created":"2018-12-11T11:50:12Z","date_updated":"2023-09-20T11:35:35Z","article_number":"41906","publist_id":"6258","ec_funded":1,"file_date_updated":"2018-12-12T10:18:09Z","citation":{"short":"B. Kuhn, T. Nodzyński, S. Errafi, R. Bucher, S. Gupta, B. Aryal, P. Dobrev, L. Bigler, M. Geisler, E. Zažímalová, J. Friml, C. Ringli, Scientific Reports 7 (2017).","mla":"Kuhn, Benjamin, et al. “Flavonol-Induced Changes in PIN2 Polarity and Auxin Transport in the Arabidopsis Thaliana Rol1-2 Mutant Require Phosphatase Activity.” Scientific Reports, vol. 7, 41906, Nature Publishing Group, 2017, doi:10.1038/srep41906.","chicago":"Kuhn, Benjamin, Tomasz Nodzyński, Sanae Errafi, Rahel Bucher, Shibu Gupta, Bibek Aryal, Petre Dobrev, et al. “Flavonol-Induced Changes in PIN2 Polarity and Auxin Transport in the Arabidopsis Thaliana Rol1-2 Mutant Require Phosphatase Activity.” Scientific Reports. Nature Publishing Group, 2017. https://doi.org/10.1038/srep41906.","ama":"Kuhn B, Nodzyński T, Errafi S, et al. Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity. Scientific Reports. 2017;7. doi:10.1038/srep41906","apa":"Kuhn, B., Nodzyński, T., Errafi, S., Bucher, R., Gupta, S., Aryal, B., … Ringli, C. (2017). Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity. Scientific Reports. Nature Publishing Group. https://doi.org/10.1038/srep41906","ieee":"B. Kuhn et al., “Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity,” Scientific Reports, vol. 7. Nature Publishing Group, 2017.","ista":"Kuhn B, Nodzyński T, Errafi S, Bucher R, Gupta S, Aryal B, Dobrev P, Bigler L, Geisler M, Zažímalová E, Friml J, Ringli C. 2017. Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity. Scientific Reports. 7, 41906."},"publication":"Scientific Reports","date_published":"2017-02-06T00:00:00Z","scopus_import":"1","has_accepted_license":"1","article_processing_charge":"No","day":"06","_id":"1110","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","intvolume":" 7","ddc":["581"],"status":"public","title":"Flavonol-induced changes in PIN2 polarity and auxin transport in the Arabidopsis thaliana rol1-2 mutant require phosphatase activity","pubrep_id":"803","oa_version":"Published Version","file":[{"date_updated":"2018-12-12T10:18:09Z","date_created":"2018-12-12T10:18:09Z","relation":"main_file","file_id":"5328","content_type":"application/pdf","file_size":1654496,"creator":"system","access_level":"open_access","file_name":"IST-2017-803-v1+1_srep41906.pdf"}],"type":"journal_article","abstract":[{"text":"The phytohormone auxin is a major determinant and regulatory component important for plant development. Auxin transport between cells is mediated by a complex system of transporters such as AUX1/LAX, PIN, and ABCB proteins, and their localization and activity is thought to be influenced by phosphatases and kinases. Flavonols have been shown to alter auxin transport activity and changes in flavonol accumulation in the Arabidopsis thaliana rol1-2 mutant cause defects in auxin transport and seedling development. A new mutation in ROOTS CURL IN NPA 1 (RCN1), encoding a regulatory subunit of the phosphatase PP2A, was found to suppress the growth defects of rol1-2 without changing the flavonol content. rol1-2 rcn1-3 double mutants show wild type-like auxin transport activity while levels of free auxin are not affected by rcn1-3. In the rol1-2 mutant, PIN2 shows a flavonol-induced basal-to-apical shift in polar localization which is reversed in the rol1-2 rcn1-3 to basal localization. In vivo analysis of PINOID action, a kinase known to influence PIN protein localization in a PP2A-antagonistic manner, revealed a negative impact of flavonols on PINOID activity. Together, these data suggest that flavonols affect auxin transport by modifying the antagonistic kinase/phosphatase equilibrium.","lang":"eng"}]}]