[{"scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1810.07039"}],"month":"11","intvolume":" 147","abstract":[{"lang":"eng","text":"Li-Nadler proposed a conjecture about traces of Hecke categories, which implies the semistable part of the Betti geometric Langlands conjecture of Ben-Zvi-Nadler in genus 1. We prove a Weyl group analogue of this conjecture. Our theorem holds in the natural generality of reflection groups in Euclidean or hyperbolic space. As a corollary, we give an expression of the centralizer of a finite order element in a reflection group using homotopy theory. "}],"oa_version":"Preprint","volume":147,"issue":"11","ec_funded":1,"publication_identifier":{"eissn":["1088-6826"],"issn":["0002-9939"]},"publication_status":"published","language":[{"iso":"eng"}],"type":"journal_article","article_type":"original","status":"public","_id":"6986","department":[{"_id":"TaHa"}],"date_updated":"2023-09-05T12:22:21Z","publisher":"AMS","quality_controlled":"1","oa":1,"page":"4597-4604","doi":"10.1090/proc/14586","date_published":"2019-11-01T00:00:00Z","date_created":"2019-11-04T16:10:50Z","isi":1,"year":"2019","day":"01","publication":"Proceedings of the American Mathematical Society","project":[{"_id":"25E549F4-B435-11E9-9278-68D0E5697425","call_identifier":"FP7","grant_number":"320593","name":"Arithmetic and physics of Higgs moduli spaces"}],"author":[{"first_name":"Penghui","id":"42A24CCC-F248-11E8-B48F-1D18A9856A87","last_name":"Li","full_name":"Li, Penghui"}],"external_id":{"isi":["000488621700004"],"arxiv":["1810.07039"]},"article_processing_charge":"No","title":"A colimit of traces of reflection groups","citation":{"mla":"Li, Penghui. “A Colimit of Traces of Reflection Groups.” Proceedings of the American Mathematical Society, vol. 147, no. 11, AMS, 2019, pp. 4597–604, doi:10.1090/proc/14586.","ama":"Li P. A colimit of traces of reflection groups. Proceedings of the American Mathematical Society. 2019;147(11):4597-4604. doi:10.1090/proc/14586","apa":"Li, P. (2019). A colimit of traces of reflection groups. Proceedings of the American Mathematical Society. AMS. https://doi.org/10.1090/proc/14586","short":"P. Li, Proceedings of the American Mathematical Society 147 (2019) 4597–4604.","ieee":"P. Li, “A colimit of traces of reflection groups,” Proceedings of the American Mathematical Society, vol. 147, no. 11. AMS, pp. 4597–4604, 2019.","chicago":"Li, Penghui. “A Colimit of Traces of Reflection Groups.” Proceedings of the American Mathematical Society. AMS, 2019. https://doi.org/10.1090/proc/14586.","ista":"Li P. 2019. A colimit of traces of reflection groups. Proceedings of the American Mathematical Society. 147(11), 4597–4604."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1"},{"doi":"10.1016/j.neuron.2019.01.051","date_published":"2019-04-03T00:00:00Z","date_created":"2019-05-14T13:06:30Z","page":"159-172.e7","day":"03","publication":"Neuron","isi":1,"has_accepted_license":"1","year":"2019","quality_controlled":"1","publisher":"Elsevier","oa":1,"title":"Adult neural stem cells and multiciliated ependymal cells share a common lineage regulated by the Geminin family members","author":[{"first_name":"G","full_name":"Ortiz-Álvarez, G","last_name":"Ortiz-Álvarez"},{"first_name":"M","last_name":"Daclin","full_name":"Daclin, M"},{"first_name":"A","last_name":"Shihavuddin","full_name":"Shihavuddin, A"},{"first_name":"P","full_name":"Lansade, P","last_name":"Lansade"},{"last_name":"Fortoul","full_name":"Fortoul, A","first_name":"A"},{"first_name":"M","last_name":"Faucourt","full_name":"Faucourt, M"},{"last_name":"Clavreul","full_name":"Clavreul, S","first_name":"S"},{"last_name":"Lalioti","full_name":"Lalioti, ME","first_name":"ME"},{"first_name":"S","full_name":"Taraviras, S","last_name":"Taraviras"},{"last_name":"Hippenmeyer","full_name":"Hippenmeyer, Simon","orcid":"0000-0003-2279-1061","id":"37B36620-F248-11E8-B48F-1D18A9856A87","first_name":"Simon"},{"last_name":"Livet","full_name":"Livet, J","first_name":"J"},{"last_name":"Meunier","full_name":"Meunier, A","first_name":"A"},{"first_name":"A","full_name":"Genovesio, A","last_name":"Genovesio"},{"full_name":"Spassky, N","last_name":"Spassky","first_name":"N"}],"external_id":{"isi":["000463337900018"],"pmid":["30824354"]},"article_processing_charge":"No","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","citation":{"apa":"Ortiz-Álvarez, G., Daclin, M., Shihavuddin, A., Lansade, P., Fortoul, A., Faucourt, M., … Spassky, N. (2019). Adult neural stem cells and multiciliated ependymal cells share a common lineage regulated by the Geminin family members. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2019.01.051","ama":"Ortiz-Álvarez G, Daclin M, Shihavuddin A, et al. Adult neural stem cells and multiciliated ependymal cells share a common lineage regulated by the Geminin family members. Neuron. 2019;102(1):159-172.e7. doi:10.1016/j.neuron.2019.01.051","ieee":"G. Ortiz-Álvarez et al., “Adult neural stem cells and multiciliated ependymal cells share a common lineage regulated by the Geminin family members,” Neuron, vol. 102, no. 1. Elsevier, p. 159–172.e7, 2019.","short":"G. Ortiz-Álvarez, M. Daclin, A. Shihavuddin, P. Lansade, A. Fortoul, M. Faucourt, S. Clavreul, M. Lalioti, S. Taraviras, S. Hippenmeyer, J. Livet, A. Meunier, A. Genovesio, N. Spassky, Neuron 102 (2019) 159–172.e7.","mla":"Ortiz-Álvarez, G., et al. “Adult Neural Stem Cells and Multiciliated Ependymal Cells Share a Common Lineage Regulated by the Geminin Family Members.” Neuron, vol. 102, no. 1, Elsevier, 2019, p. 159–172.e7, doi:10.1016/j.neuron.2019.01.051.","ista":"Ortiz-Álvarez G, Daclin M, Shihavuddin A, Lansade P, Fortoul A, Faucourt M, Clavreul S, Lalioti M, Taraviras S, Hippenmeyer S, Livet J, Meunier A, Genovesio A, Spassky N. 2019. Adult neural stem cells and multiciliated ependymal cells share a common lineage regulated by the Geminin family members. Neuron. 102(1), 159–172.e7.","chicago":"Ortiz-Álvarez, G, M Daclin, A Shihavuddin, P Lansade, A Fortoul, M Faucourt, S Clavreul, et al. “Adult Neural Stem Cells and Multiciliated Ependymal Cells Share a Common Lineage Regulated by the Geminin Family Members.” Neuron. Elsevier, 2019. https://doi.org/10.1016/j.neuron.2019.01.051."},"project":[{"grant_number":"725780","name":"Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development","call_identifier":"H2020","_id":"260018B0-B435-11E9-9278-68D0E5697425"}],"volume":102,"issue":"1","ec_funded":1,"license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","file":[{"date_updated":"2020-07-14T12:47:30Z","file_size":7288572,"creator":"dernst","date_created":"2019-05-15T09:28:41Z","file_name":"2019_Neuron_Ortiz.pdf","content_type":"application/pdf","access_level":"open_access","relation":"main_file","file_id":"6457","checksum":"1fb6e195c583eb0c5cabf26f69ff6675"}],"language":[{"iso":"eng"}],"publication_identifier":{"issn":["0896-6273"],"eissn":["1097-4199"]},"publication_status":"published","month":"04","intvolume":" 102","scopus_import":"1","oa_version":"Published Version","pmid":1,"abstract":[{"lang":"eng","text":"Adult neural stem cells and multiciliated ependymalcells are glial cells essential for neurological func-tions. Together, they make up the adult neurogenicniche. Using both high-throughput clonal analysisand single-cell resolution of progenitor division pat-terns and fate, we show that these two componentsof the neurogenic niche are lineally related: adult neu-ral stem cells are sister cells to ependymal cells,whereas most ependymal cells arise from the termi-nal symmetric divisions of the lineage. Unexpectedly,we found that the antagonist regulators of DNA repli-cation, GemC1 and Geminin, can tune the proportionof neural stem cells and ependymal cells. Our find-ings reveal the controlled dynamic of the neurogenicniche ontogeny and identify the Geminin familymembers as key regulators of the initial pool of adultneural stem cells."}],"file_date_updated":"2020-07-14T12:47:30Z","department":[{"_id":"SiHi"}],"ddc":["570"],"date_updated":"2023-09-05T13:02:21Z","status":"public","type":"journal_article","tmp":{"short":"CC BY-NC-ND (4.0)","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png"},"_id":"6454"},{"day":"21","publication":"Current Biology","isi":1,"year":"2019","date_published":"2019-10-21T00:00:00Z","doi":"10.1016/j.cub.2019.08.068","date_created":"2019-11-04T15:18:29Z","page":"R1091-R1093","quality_controlled":"1","publisher":"Cell Press","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","citation":{"chicago":"Kopf, Aglaja, and Michael K Sixt. “Gut Homeostasis: Active Migration of Intestinal Epithelial Cells in Tissue Renewal.” Current Biology. Cell Press, 2019. https://doi.org/10.1016/j.cub.2019.08.068.","ista":"Kopf A, Sixt MK. 2019. Gut homeostasis: Active migration of intestinal epithelial cells in tissue renewal. Current Biology. 29(20), R1091–R1093.","mla":"Kopf, Aglaja, and Michael K. Sixt. “Gut Homeostasis: Active Migration of Intestinal Epithelial Cells in Tissue Renewal.” Current Biology, vol. 29, no. 20, Cell Press, 2019, pp. R1091–93, doi:10.1016/j.cub.2019.08.068.","ama":"Kopf A, Sixt MK. Gut homeostasis: Active migration of intestinal epithelial cells in tissue renewal. Current Biology. 2019;29(20):R1091-R1093. doi:10.1016/j.cub.2019.08.068","apa":"Kopf, A., & Sixt, M. K. (2019). Gut homeostasis: Active migration of intestinal epithelial cells in tissue renewal. Current Biology. Cell Press. https://doi.org/10.1016/j.cub.2019.08.068","ieee":"A. Kopf and M. K. Sixt, “Gut homeostasis: Active migration of intestinal epithelial cells in tissue renewal,” Current Biology, vol. 29, no. 20. Cell Press, pp. R1091–R1093, 2019.","short":"A. Kopf, M.K. Sixt, Current Biology 29 (2019) R1091–R1093."},"title":"Gut homeostasis: Active migration of intestinal epithelial cells in tissue renewal","author":[{"first_name":"Aglaja","id":"31DAC7B6-F248-11E8-B48F-1D18A9856A87","last_name":"Kopf","orcid":"0000-0002-2187-6656","full_name":"Kopf, Aglaja"},{"first_name":"Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","last_name":"Sixt","full_name":"Sixt, Michael K","orcid":"0000-0002-6620-9179"}],"article_processing_charge":"No","external_id":{"isi":["000491286200016"],"pmid":["31639357"]},"language":[{"iso":"eng"}],"publication_identifier":{"issn":["0960-9822"],"eissn":["1879-0445"]},"publication_status":"published","issue":"20","volume":29,"oa_version":"None","pmid":1,"month":"10","intvolume":" 29","scopus_import":"1","date_updated":"2023-09-05T12:43:43Z","department":[{"_id":"MiSi"}],"_id":"6979","status":"public","type":"journal_article","article_type":"original"},{"publication_status":"published","publication_identifier":{"issn":["0261-4189"],"eissn":["1460-2075"]},"language":[{"iso":"eng"}],"file":[{"file_name":"2019_Embo_Petridou.pdf","date_created":"2019-11-04T15:30:08Z","file_size":847356,"date_updated":"2020-07-14T12:47:46Z","creator":"dernst","file_id":"6981","checksum":"76f7f4e79ab6d850c30017a69726fd85","content_type":"application/pdf","relation":"main_file","access_level":"open_access"}],"ec_funded":1,"volume":38,"issue":"20","abstract":[{"text":"Tissue morphogenesis in multicellular organisms is brought about by spatiotemporal coordination of mechanical and chemical signals. Extensive work on how mechanical forces together with the well‐established morphogen signalling pathways can actively shape living tissues has revealed evolutionary conserved mechanochemical features of embryonic development. More recently, attention has been drawn to the description of tissue material properties and how they can influence certain morphogenetic processes. Interestingly, besides the role of tissue material properties in determining how much tissues deform in response to force application, there is increasing theoretical and experimental evidence, suggesting that tissue material properties can abruptly and drastically change in development. These changes resemble phase transitions, pointing at the intriguing possibility that important morphogenetic processes in development, such as symmetry breaking and self‐organization, might be mediated by tissue phase transitions. In this review, we summarize recent findings on the regulation and role of tissue material properties in the context of the developing embryo. We posit that abrupt changes of tissue rheological properties may have important implications in maintaining the balance between robustness and adaptability during embryonic development.","lang":"eng"}],"pmid":1,"oa_version":"Published Version","scopus_import":"1","intvolume":" 38","month":"10","date_updated":"2023-09-05T13:04:13Z","ddc":["570"],"department":[{"_id":"CaHe"}],"file_date_updated":"2020-07-14T12:47:46Z","_id":"6980","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"article_type":"review","type":"journal_article","status":"public","year":"2019","isi":1,"has_accepted_license":"1","publication":"The EMBO Journal","day":"15","date_created":"2019-11-04T15:24:29Z","doi":"10.15252/embj.2019102497","date_published":"2019-10-15T00:00:00Z","oa":1,"quality_controlled":"1","publisher":"EMBO","citation":{"chicago":"Petridou, Nicoletta, and Carl-Philipp J Heisenberg. “Tissue Rheology in Embryonic Organization.” The EMBO Journal. EMBO, 2019. https://doi.org/10.15252/embj.2019102497.","ista":"Petridou N, Heisenberg C-PJ. 2019. Tissue rheology in embryonic organization. The EMBO Journal. 38(20), e102497.","mla":"Petridou, Nicoletta, and Carl-Philipp J. Heisenberg. “Tissue Rheology in Embryonic Organization.” The EMBO Journal, vol. 38, no. 20, e102497, EMBO, 2019, doi:10.15252/embj.2019102497.","ama":"Petridou N, Heisenberg C-PJ. Tissue rheology in embryonic organization. The EMBO Journal. 2019;38(20). doi:10.15252/embj.2019102497","apa":"Petridou, N., & Heisenberg, C.-P. J. (2019). Tissue rheology in embryonic organization. The EMBO Journal. EMBO. https://doi.org/10.15252/embj.2019102497","ieee":"N. Petridou and C.-P. J. Heisenberg, “Tissue rheology in embryonic organization,” The EMBO Journal, vol. 38, no. 20. EMBO, 2019.","short":"N. Petridou, C.-P.J. Heisenberg, The EMBO Journal 38 (2019)."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","external_id":{"isi":["000485561900001"],"pmid":["31512749"]},"article_processing_charge":"Yes (via OA deal)","author":[{"full_name":"Petridou, Nicoletta","orcid":"0000-0002-8451-1195","last_name":"Petridou","first_name":"Nicoletta","id":"2A003F6C-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Heisenberg, Carl-Philipp J","orcid":"0000-0002-0912-4566","last_name":"Heisenberg","id":"39427864-F248-11E8-B48F-1D18A9856A87","first_name":"Carl-Philipp J"}],"title":"Tissue rheology in embryonic organization","article_number":"e102497","project":[{"_id":"260F1432-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Interaction and feedback between cell mechanics and fate specification in vertebrate gastrulation","grant_number":"742573"},{"_id":"2693FD8C-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","name":"Tissue material properties in embryonic development","grant_number":"V00736"}]},{"title":"Zero-shot learning - A comprehensive evaluation of the good, the bad and the ugly","article_processing_charge":"No","external_id":{"isi":["000480343900015"],"arxiv":["1707.00600"]},"author":[{"first_name":"Yongqin","last_name":"Xian","full_name":"Xian, Yongqin"},{"last_name":"Lampert","orcid":"0000-0002-4561-241X","full_name":"Lampert, Christoph","id":"40C20FD2-F248-11E8-B48F-1D18A9856A87","first_name":"Christoph"},{"first_name":"Bernt","last_name":"Schiele","full_name":"Schiele, Bernt"},{"full_name":"Akata, Zeynep","last_name":"Akata","first_name":"Zeynep"}],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","citation":{"ista":"Xian Y, Lampert C, Schiele B, Akata Z. 2019. Zero-shot learning - A comprehensive evaluation of the good, the bad and the ugly. IEEE Transactions on Pattern Analysis and Machine Intelligence. 41(9), 2251–2265.","chicago":"Xian, Yongqin, Christoph Lampert, Bernt Schiele, and Zeynep Akata. “Zero-Shot Learning - A Comprehensive Evaluation of the Good, the Bad and the Ugly.” IEEE Transactions on Pattern Analysis and Machine Intelligence. Institute of Electrical and Electronics Engineers (IEEE), 2019. https://doi.org/10.1109/tpami.2018.2857768.","ama":"Xian Y, Lampert C, Schiele B, Akata Z. Zero-shot learning - A comprehensive evaluation of the good, the bad and the ugly. IEEE Transactions on Pattern Analysis and Machine Intelligence. 2019;41(9):2251-2265. doi:10.1109/tpami.2018.2857768","apa":"Xian, Y., Lampert, C., Schiele, B., & Akata, Z. (2019). Zero-shot learning - A comprehensive evaluation of the good, the bad and the ugly. IEEE Transactions on Pattern Analysis and Machine Intelligence. Institute of Electrical and Electronics Engineers (IEEE). https://doi.org/10.1109/tpami.2018.2857768","short":"Y. Xian, C. Lampert, B. Schiele, Z. Akata, IEEE Transactions on Pattern Analysis and Machine Intelligence 41 (2019) 2251–2265.","ieee":"Y. Xian, C. Lampert, B. Schiele, and Z. Akata, “Zero-shot learning - A comprehensive evaluation of the good, the bad and the ugly,” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 41, no. 9. Institute of Electrical and Electronics Engineers (IEEE), pp. 2251–2265, 2019.","mla":"Xian, Yongqin, et al. “Zero-Shot Learning - A Comprehensive Evaluation of the Good, the Bad and the Ugly.” IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 41, no. 9, Institute of Electrical and Electronics Engineers (IEEE), 2019, pp. 2251–65, doi:10.1109/tpami.2018.2857768."},"date_created":"2019-06-11T14:05:59Z","date_published":"2019-09-01T00:00:00Z","doi":"10.1109/tpami.2018.2857768","page":"2251 - 2265","publication":"IEEE Transactions on Pattern Analysis and Machine Intelligence","day":"01","year":"2019","isi":1,"oa":1,"quality_controlled":"1","publisher":"Institute of Electrical and Electronics Engineers (IEEE)","department":[{"_id":"ChLa"}],"date_updated":"2023-09-05T13:18:09Z","status":"public","type":"journal_article","article_type":"original","_id":"6554","volume":41,"issue":"9","language":[{"iso":"eng"}],"publication_status":"published","publication_identifier":{"eissn":["1939-3539"],"issn":["0162-8828"]},"intvolume":" 41","month":"09","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1707.00600"}],"scopus_import":"1","oa_version":"Preprint","abstract":[{"text":"Due to the importance of zero-shot learning, i.e. classifying images where there is a lack of labeled training data, the number of proposed approaches has recently increased steadily. We argue that it is time to take a step back and to analyze the status quo of the area. The purpose of this paper is three-fold. First, given the fact that there is no agreed upon zero-shot learning benchmark, we first define a new benchmark by unifying both the evaluation protocols and data splits of publicly available datasets used for this task. This is an important contribution as published results are often not comparable and sometimes even flawed due to, e.g. pre-training on zero-shot test classes. Moreover, we propose a new zero-shot learning dataset, the Animals with Attributes 2 (AWA2) dataset which we make publicly available both in terms of image features and the images themselves. Second, we compare and analyze a significant number of the state-of-the-art methods in depth, both in the classic zero-shot setting but also in the more realistic generalized zero-shot setting. Finally, we discuss in detail the limitations of the current status of the area which can be taken as a basis for advancing it.","lang":"eng"}]},{"project":[{"name":"Tracing Evolution of Auxin Transport and Polarity in Plants","grant_number":"742985","call_identifier":"H2020","_id":"261099A6-B435-11E9-9278-68D0E5697425"}],"author":[{"first_name":"Min","full_name":"Cao, Min","last_name":"Cao"},{"first_name":"Rong","last_name":"Chen","full_name":"Chen, Rong"},{"first_name":"Pan","full_name":"Li, Pan","last_name":"Li"},{"last_name":"Yu","full_name":"Yu, Yongqiang","first_name":"Yongqiang"},{"full_name":"Zheng, Rui","last_name":"Zheng","first_name":"Rui"},{"first_name":"Danfeng","last_name":"Ge","full_name":"Ge, Danfeng"},{"first_name":"Wei","full_name":"Zheng, Wei","last_name":"Zheng"},{"full_name":"Wang, Xuhui","last_name":"Wang","first_name":"Xuhui"},{"full_name":"Gu, Yangtao","last_name":"Gu","first_name":"Yangtao"},{"id":"0AE74790-0E0B-11E9-ABC7-1ACFE5697425","first_name":"Zuzana","full_name":"Gelová, Zuzana","orcid":"0000-0003-4783-1752","last_name":"Gelová"},{"first_name":"Jiří","id":"4159519E-F248-11E8-B48F-1D18A9856A87","last_name":"Friml","orcid":"0000-0002-8302-7596","full_name":"Friml, Jiří"},{"first_name":"Heng","full_name":"Zhang, Heng","last_name":"Zhang"},{"first_name":"Renyi","last_name":"Liu","full_name":"Liu, Renyi"},{"last_name":"He","full_name":"He, Jun","first_name":"Jun"},{"first_name":"Tongda","full_name":"Xu, Tongda","last_name":"Xu"}],"external_id":{"isi":["000464412700050"],"pmid":["30944466"]},"article_processing_charge":"No","title":"TMK1-mediated auxin signalling regulates differential growth of the apical hook","citation":{"ista":"Cao M, Chen R, Li P, Yu Y, Zheng R, Ge D, Zheng W, Wang X, Gu Y, Gelová Z, Friml J, Zhang H, Liu R, He J, Xu T. 2019. TMK1-mediated auxin signalling regulates differential growth of the apical hook. Nature. 568, 240–243.","chicago":"Cao, Min, Rong Chen, Pan Li, Yongqiang Yu, Rui Zheng, Danfeng Ge, Wei Zheng, et al. “TMK1-Mediated Auxin Signalling Regulates Differential Growth of the Apical Hook.” Nature. Springer Nature, 2019. https://doi.org/10.1038/s41586-019-1069-7.","ieee":"M. Cao et al., “TMK1-mediated auxin signalling regulates differential growth of the apical hook,” Nature, vol. 568. Springer Nature, pp. 240–243, 2019.","short":"M. Cao, R. Chen, P. Li, Y. Yu, R. Zheng, D. Ge, W. Zheng, X. Wang, Y. Gu, Z. Gelová, J. Friml, H. Zhang, R. Liu, J. He, T. Xu, Nature 568 (2019) 240–243.","ama":"Cao M, Chen R, Li P, et al. TMK1-mediated auxin signalling regulates differential growth of the apical hook. Nature. 2019;568:240-243. doi:10.1038/s41586-019-1069-7","apa":"Cao, M., Chen, R., Li, P., Yu, Y., Zheng, R., Ge, D., … Xu, T. (2019). TMK1-mediated auxin signalling regulates differential growth of the apical hook. Nature. Springer Nature. https://doi.org/10.1038/s41586-019-1069-7","mla":"Cao, Min, et al. “TMK1-Mediated Auxin Signalling Regulates Differential Growth of the Apical Hook.” Nature, vol. 568, Springer Nature, 2019, pp. 240–43, doi:10.1038/s41586-019-1069-7."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","publisher":"Springer Nature","quality_controlled":"1","oa":1,"page":"240-243","doi":"10.1038/s41586-019-1069-7","date_published":"2019-04-11T00:00:00Z","date_created":"2019-04-09T08:37:05Z","isi":1,"has_accepted_license":"1","year":"2019","day":"11","publication":"Nature","article_type":"original","type":"journal_article","status":"public","_id":"6259","file_date_updated":"2020-11-13T07:37:41Z","department":[{"_id":"JiFr"}],"date_updated":"2023-09-05T14:58:41Z","ddc":["580"],"scopus_import":"1","month":"04","intvolume":" 568","abstract":[{"lang":"eng","text":"The plant hormone auxin has crucial roles in almost all aspects of plant growth and development. Concentrations of auxin vary across different tissues, mediating distinct developmental outcomes and contributing to the functional diversity of auxin. However, the mechanisms that underlie these activities are poorly understood. Here we identify an auxin signalling mechanism, which acts in parallel to the canonical auxin pathway based on the transport inhibitor response1 (TIR1) and other auxin receptor F-box (AFB) family proteins (TIR1/AFB receptors)1,2, that translates levels of cellular auxin to mediate differential growth during apical-hook development. This signalling mechanism operates at the concave side of the apical hook, and involves auxin-mediated C-terminal cleavage of transmembrane kinase 1 (TMK1). The cytosolic and nucleus-translocated C terminus of TMK1 specifically interacts with and phosphorylates two non-canonical transcriptional repressors of the auxin or indole-3-acetic acid (Aux/IAA) family (IAA32 and IAA34), thereby regulating ARF transcription factors. In contrast to the degradation of Aux/IAA transcriptional repressors in the canonical pathway, the newly identified mechanism stabilizes the non-canonical IAA32 and IAA34 transcriptional repressors to regulate gene expression and ultimately inhibit growth. The auxin–TMK1 signalling pathway originates at the cell surface, is triggered by high levels of auxin and shares a partially overlapping set of transcription factors with the TIR1/AFB signalling pathway. This allows distinct interpretations of different concentrations of cellular auxin, and thus enables this versatile signalling molecule to mediate complex developmental outcomes."}],"pmid":1,"oa_version":"Submitted Version","related_material":{"link":[{"description":"News on IST Homepage","url":"https://ist.ac.at/en/news/newly-discovered-mechanism-of-plant-hormone-auxin-acts-the-opposite-way/","relation":"press_release"}]},"volume":568,"ec_funded":1,"publication_identifier":{"issn":["0028-0836"],"eissn":["1476-4687"]},"publication_status":"published","file":[{"file_name":"2019_Nature _Cao_accepted.pdf","date_created":"2020-11-13T07:37:41Z","file_size":4321328,"date_updated":"2020-11-13T07:37:41Z","creator":"dernst","success":1,"checksum":"6b84ab602a34382cf0340a37a1378c75","file_id":"8751","content_type":"application/pdf","relation":"main_file","access_level":"open_access"}],"language":[{"iso":"eng"}]},{"editor":[{"full_name":"Tworzydlo, Waclaw","last_name":"Tworzydlo","first_name":"Waclaw"},{"first_name":"Szczepan M.","full_name":"Bilinski, Szczepan M.","last_name":"Bilinski"}],"title":"Emergence of embryo shape during cleavage divisions","author":[{"full_name":"McDougall, Alex","last_name":"McDougall","first_name":"Alex"},{"full_name":"Chenevert, Janet","last_name":"Chenevert","first_name":"Janet"},{"first_name":"Benoit G","id":"33280250-F248-11E8-B48F-1D18A9856A87","last_name":"Godard","full_name":"Godard, Benoit G"},{"first_name":"Remi","last_name":"Dumollard","full_name":"Dumollard, Remi"}],"external_id":{"pmid":["31598855"]},"article_processing_charge":"No","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","citation":{"mla":"McDougall, Alex, et al. “Emergence of Embryo Shape during Cleavage Divisions.” Evo-Devo: Non-Model Species in Cell and Developmental Biology, edited by Waclaw Tworzydlo and Szczepan M. Bilinski, vol. 68, Springer Nature, 2019, pp. 127–54, doi:10.1007/978-3-030-23459-1_6.","short":"A. McDougall, J. Chenevert, B.G. Godard, R. Dumollard, in:, W. Tworzydlo, S.M. Bilinski (Eds.), Evo-Devo: Non-Model Species in Cell and Developmental Biology, Springer Nature, 2019, pp. 127–154.","ieee":"A. McDougall, J. Chenevert, B. G. Godard, and R. Dumollard, “Emergence of embryo shape during cleavage divisions,” in Evo-Devo: Non-model species in cell and developmental biology, vol. 68, W. Tworzydlo and S. M. Bilinski, Eds. Springer Nature, 2019, pp. 127–154.","apa":"McDougall, A., Chenevert, J., Godard, B. G., & Dumollard, R. (2019). Emergence of embryo shape during cleavage divisions. In W. Tworzydlo & S. M. Bilinski (Eds.), Evo-Devo: Non-model species in cell and developmental biology (Vol. 68, pp. 127–154). Springer Nature. https://doi.org/10.1007/978-3-030-23459-1_6","ama":"McDougall A, Chenevert J, Godard BG, Dumollard R. Emergence of embryo shape during cleavage divisions. In: Tworzydlo W, Bilinski SM, eds. Evo-Devo: Non-Model Species in Cell and Developmental Biology. Vol 68. Springer Nature; 2019:127-154. doi:10.1007/978-3-030-23459-1_6","chicago":"McDougall, Alex, Janet Chenevert, Benoit G Godard, and Remi Dumollard. “Emergence of Embryo Shape during Cleavage Divisions.” In Evo-Devo: Non-Model Species in Cell and Developmental Biology, edited by Waclaw Tworzydlo and Szczepan M. Bilinski, 68:127–54. Springer Nature, 2019. https://doi.org/10.1007/978-3-030-23459-1_6.","ista":"McDougall A, Chenevert J, Godard BG, Dumollard R. 2019.Emergence of embryo shape during cleavage divisions. In: Evo-Devo: Non-model species in cell and developmental biology. RESULTS, vol. 68, 127–154."},"quality_controlled":"1","publisher":"Springer Nature","oa":1,"doi":"10.1007/978-3-030-23459-1_6","date_published":"2019-10-10T00:00:00Z","date_created":"2019-11-04T16:20:19Z","page":"127-154","day":"10","publication":"Evo-Devo: Non-model species in cell and developmental biology","has_accepted_license":"1","year":"2019","status":"public","type":"book_chapter","_id":"6987","department":[{"_id":"CaHe"}],"file_date_updated":"2020-07-14T12:47:46Z","ddc":["570"],"date_updated":"2023-09-05T15:01:12Z","month":"10","intvolume":" 68","scopus_import":"1","alternative_title":["RESULTS"],"oa_version":"Submitted Version","pmid":1,"abstract":[{"text":"Cells are arranged into species-specific patterns during early embryogenesis. Such cell division patterns are important since they often reflect the distribution of localized cortical factors from eggs/fertilized eggs to specific cells as well as the emergence of organismal form. However, it has proven difficult to reveal the mechanisms that underlie the emergence of cell positioning patterns that underlie embryonic shape, likely because a systems-level approach is required that integrates cell biological, genetic, developmental, and mechanical parameters. The choice of organism to address such questions is also important. Because ascidians display the most extreme form of invariant cleavage pattern among the metazoans, we have been analyzing the cell biological mechanisms that underpin three aspects of cell division (unequal cell division (UCD), oriented cell division (OCD), and asynchronous cell cycles) which affect the overall shape of the blastula-stage ascidian embryo composed of 64 cells. In ascidians, UCD creates two small cells at the 16-cell stage that in turn undergo two further successive rounds of UCD. Starting at the 16-cell stage, the cell cycle becomes asynchronous, whereby the vegetal half divides before the animal half, thus creating 24-, 32-, 44-, and then 64-cell stages. Perturbing either UCD or the alternate cell division rhythm perturbs cell position. We propose that dynamic cell shape changes propagate throughout the embryo via cell-cell contacts to create the ascidian-specific invariant cleavage pattern.","lang":"eng"}],"volume":68,"file":[{"content_type":"application/pdf","relation":"main_file","access_level":"open_access","checksum":"7f43e1e3706d15061475c5c57efc2786","file_id":"7829","file_size":19317348,"date_updated":"2020-07-14T12:47:46Z","creator":"dernst","file_name":"2019_RESULTS_McDougall.pdf","date_created":"2020-05-14T10:09:30Z"}],"language":[{"iso":"eng"}],"publication_identifier":{"eissn":["1861-0412"],"isbn":["9783030234584","9783030234591"],"issn":["0080-1844"]},"publication_status":"published"},{"abstract":[{"lang":"eng","text":"We present and study novel optimal control problems motivated by the search for photovoltaic materials with high power-conversion efficiency. The material must perform the first step: convert light (photons) into electronic excitations. We formulate various desirable properties of the excitations as mathematical control goals at the Kohn-Sham-DFT level\r\nof theory, with the control being given by the nuclear charge distribution. We prove that nuclear distributions exist which give rise to optimal HOMO-LUMO excitations, and present illustrative numerical simulations for 1D finite nanocrystals. We observe pronounced goal-dependent features such as large electron-hole separation, and a hierarchy of length scales: internal HOMO and LUMO wavelengths < atomic spacings < (irregular) fluctuations of the doping profiles < system size."}],"oa_version":"Preprint","scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1808.04200"}],"month":"07","intvolume":" 17","publication_identifier":{"issn":["15403459"],"eissn":["15403467"]},"publication_status":"published","language":[{"iso":"eng"}],"issue":"3","volume":17,"_id":"6762","type":"journal_article","status":"public","date_updated":"2023-09-05T15:05:45Z","department":[{"_id":"JuFi"}],"publisher":"SIAM","quality_controlled":"1","oa":1,"isi":1,"year":"2019","day":"16","publication":"Multiscale Modeling and Simulation","page":"926-947","doi":"10.1137/18M1207272","date_published":"2019-07-16T00:00:00Z","date_created":"2019-08-04T21:59:21Z","citation":{"ista":"Friesecke G, Kniely M. 2019. New optimal control problems in density functional theory motivated by photovoltaics. Multiscale Modeling and Simulation. 17(3), 926–947.","chicago":"Friesecke, Gero, and Michael Kniely. “New Optimal Control Problems in Density Functional Theory Motivated by Photovoltaics.” Multiscale Modeling and Simulation. SIAM, 2019. https://doi.org/10.1137/18M1207272.","apa":"Friesecke, G., & Kniely, M. (2019). New optimal control problems in density functional theory motivated by photovoltaics. Multiscale Modeling and Simulation. SIAM. https://doi.org/10.1137/18M1207272","ama":"Friesecke G, Kniely M. New optimal control problems in density functional theory motivated by photovoltaics. Multiscale Modeling and Simulation. 2019;17(3):926-947. doi:10.1137/18M1207272","short":"G. Friesecke, M. Kniely, Multiscale Modeling and Simulation 17 (2019) 926–947.","ieee":"G. Friesecke and M. Kniely, “New optimal control problems in density functional theory motivated by photovoltaics,” Multiscale Modeling and Simulation, vol. 17, no. 3. SIAM, pp. 926–947, 2019.","mla":"Friesecke, Gero, and Michael Kniely. “New Optimal Control Problems in Density Functional Theory Motivated by Photovoltaics.” Multiscale Modeling and Simulation, vol. 17, no. 3, SIAM, 2019, pp. 926–47, doi:10.1137/18M1207272."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","author":[{"first_name":"Gero","full_name":"Friesecke, Gero","last_name":"Friesecke"},{"id":"2CA2C08C-F248-11E8-B48F-1D18A9856A87","first_name":"Michael","last_name":"Kniely","full_name":"Kniely, Michael","orcid":"0000-0001-5645-4333"}],"external_id":{"arxiv":["1808.04200"],"isi":["000487931800002"]},"article_processing_charge":"No","title":"New optimal control problems in density functional theory motivated by photovoltaics"},{"citation":{"mla":"Ionica, Sorina, et al. “Modular Invariants for Genus 3 Hyperelliptic Curves.” Research in Number Theory, vol. 5, 9, Springer Nature, 2019, doi:10.1007/s40993-018-0146-6.","short":"S. Ionica, P. Kılıçer, K. Lauter, E. Lorenzo García, M.-A. Manzateanu, M. Massierer, C. Vincent, Research in Number Theory 5 (2019).","ieee":"S. Ionica et al., “Modular invariants for genus 3 hyperelliptic curves,” Research in Number Theory, vol. 5. Springer Nature, 2019.","apa":"Ionica, S., Kılıçer, P., Lauter, K., Lorenzo García, E., Manzateanu, M.-A., Massierer, M., & Vincent, C. (2019). Modular invariants for genus 3 hyperelliptic curves. Research in Number Theory. Springer Nature. https://doi.org/10.1007/s40993-018-0146-6","ama":"Ionica S, Kılıçer P, Lauter K, et al. Modular invariants for genus 3 hyperelliptic curves. Research in Number Theory. 2019;5. doi:10.1007/s40993-018-0146-6","chicago":"Ionica, Sorina, Pınar Kılıçer, Kristin Lauter, Elisa Lorenzo García, Maria-Adelina Manzateanu, Maike Massierer, and Christelle Vincent. “Modular Invariants for Genus 3 Hyperelliptic Curves.” Research in Number Theory. Springer Nature, 2019. https://doi.org/10.1007/s40993-018-0146-6.","ista":"Ionica S, Kılıçer P, Lauter K, Lorenzo García E, Manzateanu M-A, Massierer M, Vincent C. 2019. Modular invariants for genus 3 hyperelliptic curves. Research in Number Theory. 5, 9."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","external_id":{"arxiv":["1807.08986"]},"article_processing_charge":"No","author":[{"last_name":"Ionica","full_name":"Ionica, Sorina","first_name":"Sorina"},{"full_name":"Kılıçer, Pınar","last_name":"Kılıçer","first_name":"Pınar"},{"first_name":"Kristin","last_name":"Lauter","full_name":"Lauter, Kristin"},{"last_name":"Lorenzo García","full_name":"Lorenzo García, Elisa","first_name":"Elisa"},{"id":"be8d652e-a908-11ec-82a4-e2867729459c","first_name":"Maria-Adelina","last_name":"Manzateanu","full_name":"Manzateanu, Maria-Adelina"},{"first_name":"Maike","full_name":"Massierer, Maike","last_name":"Massierer"},{"full_name":"Vincent, Christelle","last_name":"Vincent","first_name":"Christelle"}],"title":"Modular invariants for genus 3 hyperelliptic curves","article_number":"9","year":"2019","publication":"Research in Number Theory","day":"02","date_created":"2022-03-18T12:09:48Z","date_published":"2019-01-02T00:00:00Z","doi":"10.1007/s40993-018-0146-6","acknowledgement":"The authors would like to thank the Lorentz Center in Leiden for hosting the Women in Numbers Europe 2 workshop and providing a productive and enjoyable environment for our initial work on this project. We are grateful to the organizers of WIN-E2, Irene Bouw, Rachel Newton and Ekin Ozman, for making this conference and this collaboration possible. We\r\nthank Irene Bouw and Christophe Ritzenhaler for helpful discussions. Ionica acknowledges support from the Thomas Jefferson Fund of the Embassy of France in the United States and the FACE Foundation. Most of Kılıçer’s work was carried out during her stay in Universiteit Leiden and Carl von Ossietzky Universität Oldenburg. Massierer was supported by the Australian Research Council (DP150101689). Vincent is supported by the National Science Foundation under Grant No. DMS-1802323 and by the Thomas Jefferson Fund of the Embassy of France in the United States and the FACE Foundation. ","oa":1,"quality_controlled":"1","publisher":"Springer Nature","date_updated":"2023-09-05T15:39:31Z","department":[{"_id":"TiBr"}],"_id":"10874","article_type":"original","type":"journal_article","keyword":["Algebra and Number Theory"],"status":"public","publication_status":"published","publication_identifier":{"issn":["2522-0160"],"eissn":["2363-9555"]},"language":[{"iso":"eng"}],"volume":5,"abstract":[{"text":"In this article we prove an analogue of a theorem of Lachaud, Ritzenthaler, and Zykin, which allows us to connect invariants of binary octics to Siegel modular forms of genus 3. We use this connection to show that certain modular functions, when restricted to the hyperelliptic locus, assume values whose denominators are products of powers of primes of bad reduction for the associated hyperelliptic curves. We illustrate our theorem with explicit computations. This work is motivated by the study of the values of these modular functions at CM points of the Siegel upper half-space, which, if their denominators are known, can be used to effectively compute models of (hyperelliptic, in our case) curves with CM.","lang":"eng"}],"oa_version":"Preprint","main_file_link":[{"url":"https://arxiv.org/abs/1807.08986","open_access":"1"}],"scopus_import":"1","intvolume":" 5","month":"01"},{"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","short":"CC BY (4.0)"},"type":"journal_article","article_type":"original","status":"public","_id":"7100","department":[{"_id":"RoSe"}],"file_date_updated":"2020-07-14T12:47:49Z","date_updated":"2023-09-06T10:47:43Z","ddc":["510"],"scopus_import":"1","intvolume":" 372","month":"11","abstract":[{"text":"We present microscopic derivations of the defocusing two-dimensional cubic nonlinear Schrödinger equation and the Gross–Pitaevskii equation starting froman interacting N-particle system of bosons. We consider the interaction potential to be given either by Wβ(x)=N−1+2βW(Nβx), for any β>0, or to be given by VN(x)=e2NV(eNx), for some spherical symmetric, nonnegative and compactly supported W,V∈L∞(R2,R). In both cases we prove the convergence of the reduced density corresponding to the exact time evolution to the projector onto the solution of the corresponding nonlinear Schrödinger equation in trace norm. For the latter potential VN we show that it is crucial to take the microscopic structure of the condensate into account in order to obtain the correct dynamics.","lang":"eng"}],"oa_version":"Published Version","ec_funded":1,"issue":"1","volume":372,"publication_status":"published","publication_identifier":{"issn":["0010-3616"],"eissn":["1432-0916"]},"language":[{"iso":"eng"}],"file":[{"file_name":"2019_CommMathPhys_Jeblick.pdf","date_created":"2019-11-25T08:11:11Z","file_size":884469,"date_updated":"2020-07-14T12:47:49Z","creator":"dernst","file_id":"7101","checksum":"cd283b475dd739e04655315abd46f528","content_type":"application/pdf","relation":"main_file","access_level":"open_access"}],"project":[{"_id":"25C6DC12-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Analysis of quantum many-body systems","grant_number":"694227"},{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"}],"external_id":{"isi":["000495193700002"]},"article_processing_charge":"Yes (via OA deal)","author":[{"full_name":"Jeblick, Maximilian","last_name":"Jeblick","first_name":"Maximilian"},{"last_name":"Leopold","full_name":"Leopold, Nikolai K","orcid":"0000-0002-0495-6822","first_name":"Nikolai K","id":"4BC40BEC-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Peter","full_name":"Pickl, Peter","last_name":"Pickl"}],"title":"Derivation of the time dependent Gross–Pitaevskii equation in two dimensions","citation":{"short":"M. Jeblick, N.K. Leopold, P. Pickl, Communications in Mathematical Physics 372 (2019) 1–69.","ieee":"M. Jeblick, N. K. Leopold, and P. Pickl, “Derivation of the time dependent Gross–Pitaevskii equation in two dimensions,” Communications in Mathematical Physics, vol. 372, no. 1. Springer Nature, pp. 1–69, 2019.","ama":"Jeblick M, Leopold NK, Pickl P. Derivation of the time dependent Gross–Pitaevskii equation in two dimensions. Communications in Mathematical Physics. 2019;372(1):1-69. doi:10.1007/s00220-019-03599-x","apa":"Jeblick, M., Leopold, N. K., & Pickl, P. (2019). Derivation of the time dependent Gross–Pitaevskii equation in two dimensions. Communications in Mathematical Physics. Springer Nature. https://doi.org/10.1007/s00220-019-03599-x","mla":"Jeblick, Maximilian, et al. “Derivation of the Time Dependent Gross–Pitaevskii Equation in Two Dimensions.” Communications in Mathematical Physics, vol. 372, no. 1, Springer Nature, 2019, pp. 1–69, doi:10.1007/s00220-019-03599-x.","ista":"Jeblick M, Leopold NK, Pickl P. 2019. Derivation of the time dependent Gross–Pitaevskii equation in two dimensions. Communications in Mathematical Physics. 372(1), 1–69.","chicago":"Jeblick, Maximilian, Nikolai K Leopold, and Peter Pickl. “Derivation of the Time Dependent Gross–Pitaevskii Equation in Two Dimensions.” Communications in Mathematical Physics. Springer Nature, 2019. https://doi.org/10.1007/s00220-019-03599-x."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","oa":1,"publisher":"Springer Nature","quality_controlled":"1","acknowledgement":"OA fund by IST Austria","page":"1-69","date_created":"2019-11-25T08:08:02Z","date_published":"2019-11-08T00:00:00Z","doi":"10.1007/s00220-019-03599-x","year":"2019","has_accepted_license":"1","isi":1,"publication":"Communications in Mathematical Physics","day":"08"}]